Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AC073910.1-201ENST00000445047 438 ntBASIC1.09□□□□□ -2.23
CTDNEP1O95476 RPS27P1-201ENST00000450552 247 ntBASIC1.09□□□□□ -2.23
CTDNEP1O95476 RPL26P26-201ENST00000480251 434 ntBASIC1.09□□□□□ -2.23
CTDNEP1O95476 RPL17P19-201ENST00000489069 552 ntBASIC1.09□□□□□ -2.23
CTDNEP1O95476 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.09□□□□□ -2.23
CTDNEP1O95476 Y_RNA.683-201ENST00000516508 93 ntBASIC1.09□□□□□ -2.23
CTDNEP1O95476 AP002001.1-203ENST00000534002 267 ntBASIC1.09□□□□□ -2.23
CTDNEP1O95476 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.09□□□□□ -2.23
CTDNEP1O95476 AC019288.1-201ENST00000557918 224 ntBASIC1.09□□□□□ -2.23
CTDNEP1O95476 AC004584.2-201ENST00000570407 410 ntBASIC1.09□□□□□ -2.23
CTDNEP1O95476 AC005730.3-201ENST00000583067 366 ntBASIC1.09□□□□□ -2.23
CTDNEP1O95476 AC087588.2-201ENST00000617667 426 ntBASIC1.09□□□□□ -2.23
CTDNEP1O95476 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.09□□□□□ -2.23
CTDNEP1O95476 MTND4LP32-201ENST00000636111 270 ntBASIC1.09□□□□□ -2.23
CTDNEP1O95476 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
CTDNEP1O95476 MIR337-201ENST00000362281 93 ntBASIC1.08□□□□□ -2.24
CTDNEP1O95476 Y_RNA.142-201ENST00000363491 102 ntBASIC1.08□□□□□ -2.24
CTDNEP1O95476 RNU6-1240P-201ENST00000365155 104 ntBASIC1.08□□□□□ -2.24
CTDNEP1O95476 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.08□□□□□ -2.24
CTDNEP1O95476 RNU6-890P-201ENST00000384121 107 ntBASIC1.08□□□□□ -2.24
CTDNEP1O95476 MIR618-201ENST00000385287 98 ntBASIC1.08□□□□□ -2.24
CTDNEP1O95476 SNORA75.6-201ENST00000391318 127 ntBASIC1.08□□□□□ -2.24
CTDNEP1O95476 AL161935.2-201ENST00000414627 60 ntBASIC1.08□□□□□ -2.24
CTDNEP1O95476 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.08□□□□□ -2.24
CTDNEP1O95476 AC092423.1-201ENST00000430165 186 ntBASIC1.08□□□□□ -2.24
CTDNEP1O95476 TOMM22P2-201ENST00000430735 237 ntBASIC1.08□□□□□ -2.24
CTDNEP1O95476 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.08□□□□□ -2.24
CTDNEP1O95476 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.08□□□□□ -2.24
CTDNEP1O95476 SNORD65B-201ENST00000459126 73 ntBASIC1.08□□□□□ -2.24
CTDNEP1O95476 AL163195.1-201ENST00000496941 348 ntBASIC1.08□□□□□ -2.24
CTDNEP1O95476 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.08□□□□□ -2.24
CTDNEP1O95476 RNU6-507P-201ENST00000516045 100 ntBASIC1.08□□□□□ -2.24
CTDNEP1O95476 AL132765.2-201ENST00000610812 351 ntBASIC1.08□□□□□ -2.24
CTDNEP1O95476 RNY1P10-201ENST00000363268 113 ntBASIC1.07□□□□□ -2.24
CTDNEP1O95476 Y_RNA.164-201ENST00000363709 102 ntBASIC1.07□□□□□ -2.24
CTDNEP1O95476 RNY3P11-201ENST00000364153 102 ntBASIC1.07□□□□□ -2.24
CTDNEP1O95476 SNORA25.8-201ENST00000364831 128 ntBASIC1.07□□□□□ -2.24
CTDNEP1O95476 RNA5SP109-201ENST00000391010 116 ntBASIC1.07□□□□□ -2.24
CTDNEP1O95476 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.07□□□□□ -2.24
CTDNEP1O95476 MRPS18CP6-201ENST00000423587 223 ntBASIC1.07□□□□□ -2.24
CTDNEP1O95476 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.07□□□□□ -2.24
CTDNEP1O95476 JTBP1-201ENST00000441314 247 ntBASIC1.07□□□□□ -2.24
CTDNEP1O95476 AC074290.1-201ENST00000448883 135 ntBASIC1.07□□□□□ -2.24
CTDNEP1O95476 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.07□□□□□ -2.24
CTDNEP1O95476 HMGN1P7-201ENST00000491722 313 ntBASIC1.07□□□□□ -2.24
CTDNEP1O95476 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.07□□□□□ -2.24
CTDNEP1O95476 RNU6-559P-201ENST00000516151 98 ntBASIC1.07□□□□□ -2.24
CTDNEP1O95476 AC022868.1-201ENST00000517767 391 ntBASIC1.07□□□□□ -2.24
CTDNEP1O95476 AC005899.2-201ENST00000584353 90 ntBASIC1.07□□□□□ -2.24
CTDNEP1O95476 MIR4781-201ENST00000585250 76 ntBASIC1.07□□□□□ -2.24
CTDNEP1O95476 UBE2V2P2-201ENST00000587677 504 ntBASIC1.07□□□□□ -2.24
CTDNEP1O95476 AC022217.4-201ENST00000604389 163 ntBASIC1.07□□□□□ -2.24
CTDNEP1O95476 AC113139.1-201ENST00000605049 239 ntBASIC1.07□□□□□ -2.24
CTDNEP1O95476 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.07□□□□□ -2.24
CTDNEP1O95476 MIR302D-201ENST00000362275 68 ntBASIC1.06□□□□□ -2.24
CTDNEP1O95476 MIR96-201ENST00000362288 78 ntBASIC1.06□□□□□ -2.24
CTDNEP1O95476 SNORD33-201ENST00000362761 85 ntBASIC1.06□□□□□ -2.24
CTDNEP1O95476 SNORD114-27-201ENST00000363766 70 ntBASIC1.06□□□□□ -2.24
CTDNEP1O95476 RNU6-879P-201ENST00000364328 108 ntBASIC1.06□□□□□ -2.24
CTDNEP1O95476 SNORD1A-201ENST00000364968 72 ntBASIC1.06□□□□□ -2.24
CTDNEP1O95476 RNU6-1080P-201ENST00000383982 107 ntBASIC1.06□□□□□ -2.24
CTDNEP1O95476 RNY3P14-201ENST00000384309 102 ntBASIC1.06□□□□□ -2.24
CTDNEP1O95476 MIR559-201ENST00000385188 96 ntBASIC1.06□□□□□ -2.24
CTDNEP1O95476 SNORA12.1-201ENST00000390873 148 ntBASIC1.06□□□□□ -2.24
CTDNEP1O95476 RNU6-360P-201ENST00000390944 104 ntBASIC1.06□□□□□ -2.24
CTDNEP1O95476 AL355796.1-201ENST00000406706 323 ntBASIC1.06□□□□□ -2.24
CTDNEP1O95476 MIR1253-201ENST00000408273 105 ntBASIC1.06□□□□□ -2.24
CTDNEP1O95476 AC008134.1-201ENST00000420943 193 ntBASIC1.06□□□□□ -2.24
CTDNEP1O95476 FTH1P12-201ENST00000432137 551 ntBASIC1.06□□□□□ -2.24
CTDNEP1O95476 RPL23AP50-201ENST00000434149 455 ntBASIC1.06□□□□□ -2.24
CTDNEP1O95476 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.06□□□□□ -2.24
CTDNEP1O95476 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.06□□□□□ -2.24
CTDNEP1O95476 AC105758.1-201ENST00000506038 399 ntBASIC1.06□□□□□ -2.24
CTDNEP1O95476 AC022493.2-201ENST00000506122 481 ntBASIC1.06□□□□□ -2.24
CTDNEP1O95476 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.06□□□□□ -2.24
CTDNEP1O95476 RNU6-875P-201ENST00000516488 106 ntBASIC1.06□□□□□ -2.24
CTDNEP1O95476 RNU6-107P-201ENST00000516643 102 ntBASIC1.06□□□□□ -2.24
CTDNEP1O95476 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.06□□□□□ -2.24
CTDNEP1O95476 MIR4801-201ENST00000582704 82 ntBASIC1.06□□□□□ -2.24
CTDNEP1O95476 AC025253.1-201ENST00000613623 543 ntBASIC1.06□□□□□ -2.24
CTDNEP1O95476 AC084781.2-201ENST00000615568 161 ntBASIC1.06□□□□□ -2.24
CTDNEP1O95476 U6.73-201ENST00000619194 103 ntBASIC1.06□□□□□ -2.24
CTDNEP1O95476 ICE2P2-201ENST00000483823 2787 ntBASIC1.05□□□□□ -2.24
CTDNEP1O95476 MIR373-201ENST00000362273 69 ntBASIC1.05□□□□□ -2.24
CTDNEP1O95476 Y_RNA.4-201ENST00000362333 112 ntBASIC1.05□□□□□ -2.24
CTDNEP1O95476 RNU6-1301P-201ENST00000362724 104 ntBASIC1.05□□□□□ -2.24
CTDNEP1O95476 RNU6-454P-201ENST00000364292 107 ntBASIC1.05□□□□□ -2.24
CTDNEP1O95476 MIR194-1-201ENST00000384892 85 ntBASIC1.05□□□□□ -2.24
CTDNEP1O95476 RPL21P1-201ENST00000399532 476 ntBASIC1.05□□□□□ -2.24
CTDNEP1O95476 RNU6-1156P-201ENST00000410365 100 ntBASIC1.05□□□□□ -2.24
CTDNEP1O95476 RNU2-7P-201ENST00000410794 178 ntBASIC1.05□□□□□ -2.24
CTDNEP1O95476 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.05□□□□□ -2.24
CTDNEP1O95476 RPL30P15-201ENST00000457129 321 ntBASIC1.05□□□□□ -2.24
CTDNEP1O95476 RPS26P45-201ENST00000471748 340 ntBASIC1.05□□□□□ -2.24
CTDNEP1O95476 RPL30P7-201ENST00000479312 323 ntBASIC1.05□□□□□ -2.24
CTDNEP1O95476 RNU6-470P-201ENST00000515954 104 ntBASIC1.05□□□□□ -2.24
CTDNEP1O95476 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.05□□□□□ -2.24
CTDNEP1O95476 RNU6-1146P-201ENST00000516282 102 ntBASIC1.05□□□□□ -2.24
CTDNEP1O95476 SNORA31.10-201ENST00000516482 106 ntBASIC1.05□□□□□ -2.24
CTDNEP1O95476 RN7SKP49-201ENST00000516675 260 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms