Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 AL355143.1-201ENST00000407101 841 ntBASIC-1.27□□□□□ -2.61
LTN1O94822 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-1.27□□□□□ -2.61
LTN1O94822 AC008628.2-201ENST00000502605 298 ntBASIC-1.27□□□□□ -2.61
LTN1O94822 AC116562.3-201ENST00000506136 177 ntBASIC-1.27□□□□□ -2.61
LTN1O94822 AC010486.3-201ENST00000511602 785 ntBASIC-1.27□□□□□ -2.61
LTN1O94822 AC006600.1-201ENST00000572529 153 ntBASIC-1.27□□□□□ -2.61
LTN1O94822 MIR4264-201ENST00000583520 66 ntBASIC-1.27□□□□□ -2.61
LTN1O94822 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC-1.27□□□□□ -2.61
LTN1O94822 DEFB131E-202ENST00000602581 683 ntBASIC-1.27□□□□□ -2.61
LTN1O94822 RNU1-29P-201ENST00000606574 126 ntBASIC-1.27□□□□□ -2.61
LTN1O94822 AC134878.1-201ENST00000619901 243 ntBASIC-1.27□□□□□ -2.61
LTN1O94822 SCARNA4-201ENST00000629045 128 ntBASIC-1.27□□□□□ -2.61
LTN1O94822 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.28□□□□□ -2.61
LTN1O94822 AC098592.1-201ENST00000419352 333 ntBASIC-1.28□□□□□ -2.61
LTN1O94822 AL353572.1-201ENST00000442490 417 ntBASIC-1.28□□□□□ -2.61
LTN1O94822 AC026414.1-201ENST00000504046 698 ntBASIC-1.28□□□□□ -2.61
LTN1O94822 RNU6-1116P-201ENST00000517269 99 ntBASIC-1.28□□□□□ -2.61
LTN1O94822 AC012467.1-201ENST00000607740 256 ntBASIC-1.28□□□□□ -2.61
LTN1O94822 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-1.28□□□□□ -2.61
LTN1O94822 MTND4P9-201ENST00000507819 1346 ntBASIC-1.29□□□□□ -2.62
LTN1O94822 RNU6-552P-201ENST00000362869 119 ntBASIC-1.29□□□□□ -2.62
LTN1O94822 Y_RNA.376-201ENST00000365638 108 ntBASIC-1.29□□□□□ -2.62
LTN1O94822 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-1.29□□□□□ -2.62
LTN1O94822 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-1.29□□□□□ -2.62
LTN1O94822 RNU6-1291P-201ENST00000516591 104 ntBASIC-1.29□□□□□ -2.62
LTN1O94822 RNU6-58P-201ENST00000517143 103 ntBASIC-1.29□□□□□ -2.62
LTN1O94822 AC068587.5-201ENST00000528506 175 ntBASIC-1.29□□□□□ -2.62
LTN1O94822 AC138749.4-201ENST00000563970 127 ntBASIC-1.29□□□□□ -2.62
LTN1O94822 AC087683.1-201ENST00000591187 441 ntBASIC-1.29□□□□□ -2.62
LTN1O94822 AC144521.1-201ENST00000607148 956 ntBASIC-1.29□□□□□ -2.62
LTN1O94822 Six3os1_7.1-201ENST00000621512 201 ntBASIC-1.29□□□□□ -2.62
LTN1O94822 RNU5A-6P-201ENST00000384136 116 ntBASIC-1.29□□□□□ -2.62
LTN1O94822 RNU6-24P-201ENST00000384440 107 ntBASIC-1.29□□□□□ -2.62
LTN1O94822 AC244250.2-201ENST00000418731 148 ntBASIC-1.29□□□□□ -2.62
LTN1O94822 SCARNA18-201ENST00000459004 134 ntBASIC-1.29□□□□□ -2.62
LTN1O94822 AC046134.1-201ENST00000514454 666 ntBASIC-1.29□□□□□ -2.62
LTN1O94822 MIR548AR-201ENST00000582191 57 ntBASIC-1.29□□□□□ -2.62
LTN1O94822 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC-1.29□□□□□ -2.62
LTN1O94822 MIR516B2-201ENST00000385190 85 ntBASIC-1.3□□□□□ -2.62
LTN1O94822 MIR208B-201ENST00000401172 77 ntBASIC-1.3□□□□□ -2.62
LTN1O94822 MTND1P14-201ENST00000427400 950 ntBASIC-1.3□□□□□ -2.62
LTN1O94822 RNU2-56P-201ENST00000516826 190 ntBASIC-1.3□□□□□ -2.62
LTN1O94822 RNU6-341P-201ENST00000516973 96 ntBASIC-1.3□□□□□ -2.62
LTN1O94822 AC090572.1-201ENST00000519251 160 ntBASIC-1.3□□□□□ -2.62
LTN1O94822 AC021451.1-201ENST00000523498 1129 ntBASIC-1.3□□□□□ -2.62
LTN1O94822 AC100814.1-201ENST00000606963 623 ntBASIC-1.3□□□□□ -2.62
LTN1O94822 AC245008.1-201ENST00000608123 476 ntBASIC-1.3□□□□□ -2.62
LTN1O94822 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-1.3□□□□□ -2.62
LTN1O94822 ZNF204P-201ENST00000416749 2397 ntBASIC-1.31□□□□□ -2.62
LTN1O94822 SNORA1B-201ENST00000362535 133 ntBASIC-1.31□□□□□ -2.62
LTN1O94822 RNU6-873P-201ENST00000363833 107 ntBASIC-1.31□□□□□ -2.62
LTN1O94822 MIR452-201ENST00000385020 85 ntBASIC-1.31□□□□□ -2.62
LTN1O94822 RNU6-1093P-201ENST00000391194 107 ntBASIC-1.31□□□□□ -2.62
LTN1O94822 AC008134.1-201ENST00000420943 193 ntBASIC-1.31□□□□□ -2.62
LTN1O94822 AC012306.1-201ENST00000423267 114 ntBASIC-1.31□□□□□ -2.62
LTN1O94822 AL355994.1-201ENST00000424379 260 ntBASIC-1.31□□□□□ -2.62
LTN1O94822 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-1.31□□□□□ -2.62
LTN1O94822 MIR18B-201ENST00000454574 71 ntBASIC-1.31□□□□□ -2.62
LTN1O94822 MIR5692A1-201ENST00000580523 69 ntBASIC-1.31□□□□□ -2.62
LTN1O94822 MIR4677-201ENST00000584153 80 ntBASIC-1.31□□□□□ -2.62
LTN1O94822 MIR377-201ENST00000362145 69 ntBASIC-1.31□□□□□ -2.62
LTN1O94822 SNORD14.1-201ENST00000365609 90 ntBASIC-1.31□□□□□ -2.62
LTN1O94822 Y_RNA.439-201ENST00000384119 94 ntBASIC-1.31□□□□□ -2.62
LTN1O94822 FCF1P9-201ENST00000412546 282 ntBASIC-1.31□□□□□ -2.62
LTN1O94822 AC243428.1-201ENST00000421099 264 ntBASIC-1.31□□□□□ -2.62
LTN1O94822 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC-1.31□□□□□ -2.62
LTN1O94822 RN7SKP19-201ENST00000516016 252 ntBASIC-1.31□□□□□ -2.62
LTN1O94822 EIF1AXP2-201ENST00000555940 413 ntBASIC-1.31□□□□□ -2.62
LTN1O94822 MIR6507-201ENST00000613630 70 ntBASIC-1.31□□□□□ -2.62
LTN1O94822 RNU6-960P-201ENST00000364056 120 ntBASIC-1.32□□□□□ -2.62
LTN1O94822 RNU2-62P-201ENST00000410868 191 ntBASIC-1.32□□□□□ -2.62
LTN1O94822 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC-1.32□□□□□ -2.62
LTN1O94822 ADI1P3-201ENST00000549509 470 ntBASIC-1.32□□□□□ -2.62
LTN1O94822 MIR4438-201ENST00000585271 93 ntBASIC-1.32□□□□□ -2.62
LTN1O94822 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC-1.32□□□□□ -2.62
LTN1O94822 RNY4P6-201ENST00000363667 96 ntBASIC-1.33□□□□□ -2.62
LTN1O94822 AC117470.1-201ENST00000381974 330 ntBASIC-1.33□□□□□ -2.62
LTN1O94822 RNU6-25P-201ENST00000383873 107 ntBASIC-1.33□□□□□ -2.62
LTN1O94822 RNU6-29P-201ENST00000384637 107 ntBASIC-1.33□□□□□ -2.62
LTN1O94822 RNU6-205P-201ENST00000390858 107 ntBASIC-1.33□□□□□ -2.62
LTN1O94822 RNU2-54P-201ENST00000410299 190 ntBASIC-1.33□□□□□ -2.62
LTN1O94822 AL117339.3-201ENST00000418733 162 ntBASIC-1.33□□□□□ -2.62
LTN1O94822 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-1.33□□□□□ -2.62
LTN1O94822 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC-1.33□□□□□ -2.62
LTN1O94822 AL360271.2-201ENST00000447710 161 ntBASIC-1.33□□□□□ -2.62
LTN1O94822 AC006380.1-201ENST00000603598 186 ntBASIC-1.33□□□□□ -2.62
LTN1O94822 AC099786.3-201ENST00000565735 1410 ntBASIC-1.33□□□□□ -2.62
LTN1O94822 Y_RNA.267-201ENST00000364679 109 ntBASIC-1.34□□□□□ -2.62
LTN1O94822 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.34□□□□□ -2.62
LTN1O94822 Y_RNA.537-201ENST00000384626 109 ntBASIC-1.34□□□□□ -2.62
LTN1O94822 AC092809.3-201ENST00000415453 231 ntBASIC-1.34□□□□□ -2.62
LTN1O94822 RNA5SP47-201ENST00000517230 109 ntBASIC-1.34□□□□□ -2.62
LTN1O94822 AP002004.2-201ENST00000531656 154 ntBASIC-1.34□□□□□ -2.62
LTN1O94822 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-1.34□□□□□ -2.62
LTN1O94822 AP002802.2-201ENST00000605877 235 ntBASIC-1.34□□□□□ -2.62
LTN1O94822 uc_338.4-201ENST00000616635 176 ntBASIC-1.34□□□□□ -2.62
LTN1O94822 RNU6-428P-201ENST00000362942 107 ntBASIC-1.34□□□□□ -2.62
LTN1O94822 RNU6-853P-201ENST00000364306 107 ntBASIC-1.34□□□□□ -2.62
LTN1O94822 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.34□□□□□ -2.62
LTN1O94822 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-1.34□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 201.6 ms