Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 AC109810.1-201ENST00000534066 224 ntBASIC0.39□□□□□ -2.35
GMDSO60547 UBL5P4-201ENST00000562584 236 ntBASIC0.39□□□□□ -2.35
GMDSO60547 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC0.39□□□□□ -2.35
GMDSO60547 AP001330.5-201ENST00000607176 411 ntBASIC0.39□□□□□ -2.35
GMDSO60547 AC010999.1-201ENST00000611856 324 ntBASIC0.39□□□□□ -2.35
GMDSO60547 AC009248.2-201ENST00000619826 254 ntBASIC0.39□□□□□ -2.35
GMDSO60547 MIR6513-201ENST00000621188 64 ntBASIC0.39□□□□□ -2.35
GMDSO60547 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.38□□□□□ -2.35
GMDSO60547 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
GMDSO60547 MIR452-201ENST00000385020 85 ntBASIC0.38□□□□□ -2.35
GMDSO60547 AL162725.1-201ENST00000435405 301 ntBASIC0.38□□□□□ -2.35
GMDSO60547 RNU7-187P-201ENST00000458985 68 ntBASIC0.38□□□□□ -2.35
GMDSO60547 RN7SKP298-201ENST00000515950 94 ntBASIC0.38□□□□□ -2.35
GMDSO60547 RNU6-415P-201ENST00000516252 97 ntBASIC0.38□□□□□ -2.35
GMDSO60547 AC091144.1-201ENST00000519573 138 ntBASIC0.38□□□□□ -2.35
GMDSO60547 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.38□□□□□ -2.35
GMDSO60547 AC104383.1-201ENST00000530297 370 ntBASIC0.38□□□□□ -2.35
GMDSO60547 FAM157A-202ENST00000615155 405 ntBASIC0.38□□□□□ -2.35
GMDSO60547 Y_RNA.116-201ENST00000363292 103 ntBASIC0.37□□□□□ -2.35
GMDSO60547 RNU1-133P-201ENST00000364867 167 ntBASIC0.37□□□□□ -2.35
GMDSO60547 RNU6-42P-201ENST00000384165 107 ntBASIC0.37□□□□□ -2.35
GMDSO60547 SNORA20B-201ENST00000384220 132 ntBASIC0.37□□□□□ -2.35
GMDSO60547 RNU6-1237P-201ENST00000384777 107 ntBASIC0.37□□□□□ -2.35
GMDSO60547 RNU1-119P-201ENST00000391122 165 ntBASIC0.37□□□□□ -2.35
GMDSO60547 RPL30P16-201ENST00000419341 429 ntBASIC0.37□□□□□ -2.35
GMDSO60547 AC244023.1-201ENST00000426884 112 ntBASIC0.37□□□□□ -2.35
GMDSO60547 MTND3P16-201ENST00000452205 344 ntBASIC0.37□□□□□ -2.35
GMDSO60547 HMGN2P26-201ENST00000463169 339 ntBASIC0.37□□□□□ -2.35
GMDSO60547 MTND3P7-201ENST00000474435 343 ntBASIC0.37□□□□□ -2.35
GMDSO60547 RN7SKP12-201ENST00000516275 143 ntBASIC0.37□□□□□ -2.35
GMDSO60547 Y_RNA.683-201ENST00000516508 93 ntBASIC0.37□□□□□ -2.35
GMDSO60547 RNU6-229P-201ENST00000516614 102 ntBASIC0.37□□□□□ -2.35
GMDSO60547 MTND4LP26-201ENST00000518144 282 ntBASIC0.37□□□□□ -2.35
GMDSO60547 AC242498.1-201ENST00000604134 111 ntBASIC0.37□□□□□ -2.35
GMDSO60547 AC243994.1-201ENST00000618627 109 ntBASIC0.37□□□□□ -2.35
GMDSO60547 MIR5087-201ENST00000635826 76 ntBASIC0.37□□□□□ -2.35
GMDSO60547 Y_RNA.167-201ENST00000363735 109 ntBASIC0.36□□□□□ -2.35
GMDSO60547 SNORA50A-201ENST00000384225 134 ntBASIC0.36□□□□□ -2.35
GMDSO60547 RNU4-55P-201ENST00000410731 137 ntBASIC0.36□□□□□ -2.35
GMDSO60547 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.36□□□□□ -2.35
GMDSO60547 MTCYBP10-201ENST00000424905 650 ntBASIC0.36□□□□□ -2.35
GMDSO60547 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.36□□□□□ -2.35
GMDSO60547 AC098934.3-201ENST00000430450 190 ntBASIC0.36□□□□□ -2.35
GMDSO60547 RNU7-175P-201ENST00000515915 61 ntBASIC0.36□□□□□ -2.35
GMDSO60547 RNA5SP20-201ENST00000515976 84 ntBASIC0.36□□□□□ -2.35
GMDSO60547 RNU6-1291P-201ENST00000516591 104 ntBASIC0.36□□□□□ -2.35
GMDSO60547 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.36□□□□□ -2.35
GMDSO60547 AC073544.1-201ENST00000600110 1595 ntBASIC0.36□□□□□ -2.35
GMDSO60547 SNORA25.3-201ENST00000363205 127 ntBASIC0.35□□□□□ -2.35
GMDSO60547 RNU6-407P-201ENST00000365280 104 ntBASIC0.35□□□□□ -2.35
GMDSO60547 SNORA69-201ENST00000383895 132 ntBASIC0.35□□□□□ -2.35
GMDSO60547 RNY1P14-201ENST00000384426 108 ntBASIC0.35□□□□□ -2.35
GMDSO60547 MIR514A2-201ENST00000385131 88 ntBASIC0.35□□□□□ -2.35
GMDSO60547 MIR514A3-201ENST00000385132 88 ntBASIC0.35□□□□□ -2.35
GMDSO60547 MIR518E-201ENST00000385252 88 ntBASIC0.35□□□□□ -2.35
GMDSO60547 SNORD111-201ENST00000408139 94 ntBASIC0.35□□□□□ -2.35
GMDSO60547 ZNF885P-201ENST00000420174 1098 ntBASIC0.35□□□□□ -2.35
GMDSO60547 AC120024.3-201ENST00000603167 156 ntBASIC0.35□□□□□ -2.35
GMDSO60547 MIR6734-201ENST00000621166 68 ntBASIC0.35□□□□□ -2.35
GMDSO60547 AL008636.1-201ENST00000625038 1018 ntBASIC0.35□□□□□ -2.35
GMDSO60547 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.35□□□□□ -2.35
GMDSO60547 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.34□□□□□ -2.35
GMDSO60547 Y_RNA.151-201ENST00000363566 112 ntBASIC0.34□□□□□ -2.36
GMDSO60547 MIR15B-201ENST00000385045 98 ntBASIC0.34□□□□□ -2.36
GMDSO60547 RNU6-994P-201ENST00000410507 111 ntBASIC0.34□□□□□ -2.36
GMDSO60547 AC018865.2-201ENST00000423631 129 ntBASIC0.34□□□□□ -2.36
GMDSO60547 AC244098.3-201ENST00000424803 96 ntBASIC0.34□□□□□ -2.36
GMDSO60547 NDUFA5P4-201ENST00000436704 385 ntBASIC0.34□□□□□ -2.36
GMDSO60547 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC0.34□□□□□ -2.36
GMDSO60547 RPL30P10-201ENST00000488148 337 ntBASIC0.34□□□□□ -2.36
GMDSO60547 RNU4-57P-201ENST00000515980 135 ntBASIC0.34□□□□□ -2.36
GMDSO60547 RNU6-496P-201ENST00000516145 99 ntBASIC0.34□□□□□ -2.36
GMDSO60547 RNU11-2P-201ENST00000516898 142 ntBASIC0.34□□□□□ -2.36
GMDSO60547 AP003716.2-201ENST00000528260 108 ntBASIC0.34□□□□□ -2.36
GMDSO60547 AC011195.1-201ENST00000578177 177 ntBASIC0.34□□□□□ -2.36
GMDSO60547 SNORA4-201ENST00000584302 138 ntBASIC0.34□□□□□ -2.36
GMDSO60547 RNU6-94P-201ENST00000607728 107 ntBASIC0.34□□□□□ -2.36
GMDSO60547 AC097520.1-201ENST00000624435 385 ntBASIC0.34□□□□□ -2.36
GMDSO60547 MIR6516-201ENST00000630554 81 ntBASIC0.34□□□□□ -2.36
GMDSO60547 AC099654.12-201ENST00000639868 649 ntBASIC0.34□□□□□ -2.36
GMDSO60547 SNORA27.1-201ENST00000362604 124 ntBASIC0.33□□□□□ -2.36
GMDSO60547 RNA5SP48-201ENST00000363969 126 ntBASIC0.33□□□□□ -2.36
GMDSO60547 RNY1P8-201ENST00000383970 114 ntBASIC0.33□□□□□ -2.36
GMDSO60547 RNU6-1297P-201ENST00000384415 104 ntBASIC0.33□□□□□ -2.36
GMDSO60547 MIR1185-1-201ENST00000408598 86 ntBASIC0.33□□□□□ -2.36
GMDSO60547 RNU5A-5P-201ENST00000411054 116 ntBASIC0.33□□□□□ -2.36
GMDSO60547 USMG5P1-201ENST00000425964 177 ntBASIC0.33□□□□□ -2.36
GMDSO60547 Z98949.2-201ENST00000440996 144 ntBASIC0.33□□□□□ -2.36
GMDSO60547 SUMO1P2-201ENST00000452524 304 ntBASIC0.33□□□□□ -2.36
GMDSO60547 AC018710.1-201ENST00000506509 158 ntBASIC0.33□□□□□ -2.36
GMDSO60547 AC046134.1-201ENST00000514454 666 ntBASIC0.33□□□□□ -2.36
GMDSO60547 Y_RNA.695-201ENST00000516715 107 ntBASIC0.33□□□□□ -2.36
GMDSO60547 LRRC34P1-201ENST00000542742 915 ntBASIC0.33□□□□□ -2.36
GMDSO60547 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.33□□□□□ -2.36
GMDSO60547 MTATP6P24-201ENST00000576835 677 ntBASIC0.33□□□□□ -2.36
GMDSO60547 MIR3908-201ENST00000579798 126 ntBASIC0.33□□□□□ -2.36
GMDSO60547 AC243829.3-201ENST00000622177 108 ntBASIC0.33□□□□□ -2.36
GMDSO60547 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
GMDSO60547 AC134026.1-201ENST00000623249 2239 ntBASIC0.32□□□□□ -2.36
GMDSO60547 RNU6-254P-201ENST00000363377 107 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 169.6 ms