Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AC138649.3-201ENST00000622154 254 ntBASIC-0.83□□□□□ -2.54
SSSCA1O60232 MIR6828-201ENST00000636181 60 ntBASIC-0.83□□□□□ -2.54
SSSCA1O60232 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.83□□□□□ -2.54
SSSCA1O60232 SNORA72.1-201ENST00000363485 129 ntBASIC-0.84□□□□□ -2.54
SSSCA1O60232 Y_RNA.466-201ENST00000384294 113 ntBASIC-0.84□□□□□ -2.54
SSSCA1O60232 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.84□□□□□ -2.54
SSSCA1O60232 SNORD83B-201ENST00000386745 93 ntBASIC-0.84□□□□□ -2.54
SSSCA1O60232 MIR1298-201ENST00000408783 112 ntBASIC-0.84□□□□□ -2.54
SSSCA1O60232 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.84□□□□□ -2.54
SSSCA1O60232 RPL21P38-201ENST00000418090 167 ntBASIC-0.84□□□□□ -2.54
SSSCA1O60232 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC-0.84□□□□□ -2.54
SSSCA1O60232 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC-0.84□□□□□ -2.54
SSSCA1O60232 MTATP6P26-201ENST00000445926 662 ntBASIC-0.84□□□□□ -2.54
SSSCA1O60232 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC-0.84□□□□□ -2.54
SSSCA1O60232 PRDX4P1-201ENST00000507189 574 ntBASIC-0.84□□□□□ -2.54
SSSCA1O60232 AC022616.3-201ENST00000523940 148 ntBASIC-0.84□□□□□ -2.54
SSSCA1O60232 RPL21P9-201ENST00000556149 474 ntBASIC-0.84□□□□□ -2.54
SSSCA1O60232 AC010525.2-201ENST00000590920 195 ntBASIC-0.84□□□□□ -2.54
SSSCA1O60232 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.84□□□□□ -2.54
SSSCA1O60232 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.84□□□□□ -2.54
SSSCA1O60232 MIR4251-201ENST00000635819 61 ntBASIC-0.84□□□□□ -2.54
SSSCA1O60232 Y_RNA.46-201ENST00000362695 102 ntBASIC-0.85□□□□□ -2.55
SSSCA1O60232 Y_RNA.274-201ENST00000364714 101 ntBASIC-0.85□□□□□ -2.55
SSSCA1O60232 SNORA24.1-201ENST00000384401 135 ntBASIC-0.85□□□□□ -2.55
SSSCA1O60232 MIR635-201ENST00000384830 98 ntBASIC-0.85□□□□□ -2.55
SSSCA1O60232 MIR802-201ENST00000390235 94 ntBASIC-0.85□□□□□ -2.55
SSSCA1O60232 RNU2-8P-201ENST00000410727 190 ntBASIC-0.85□□□□□ -2.55
SSSCA1O60232 RNA5SP25-201ENST00000410815 110 ntBASIC-0.85□□□□□ -2.55
SSSCA1O60232 FCF1P9-201ENST00000412546 282 ntBASIC-0.85□□□□□ -2.55
SSSCA1O60232 AL117339.3-201ENST00000418733 162 ntBASIC-0.85□□□□□ -2.55
SSSCA1O60232 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-0.85□□□□□ -2.55
SSSCA1O60232 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.85□□□□□ -2.55
SSSCA1O60232 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.85□□□□□ -2.55
SSSCA1O60232 AC107934.1-201ENST00000522215 217 ntBASIC-0.85□□□□□ -2.55
SSSCA1O60232 AP003168.1-201ENST00000530091 307 ntBASIC-0.85□□□□□ -2.55
SSSCA1O60232 AP002004.2-201ENST00000531656 154 ntBASIC-0.85□□□□□ -2.55
SSSCA1O60232 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC-0.85□□□□□ -2.55
SSSCA1O60232 MIR4263-201ENST00000584745 83 ntBASIC-0.85□□□□□ -2.55
SSSCA1O60232 MIR4324-201ENST00000584846 72 ntBASIC-0.85□□□□□ -2.55
SSSCA1O60232 AC120024.3-201ENST00000603167 156 ntBASIC-0.85□□□□□ -2.55
SSSCA1O60232 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC-0.85□□□□□ -2.55
SSSCA1O60232 AC022960.3-201ENST00000619794 441 ntBASIC-0.85□□□□□ -2.55
SSSCA1O60232 RNU4-21P-201ENST00000362802 126 ntBASIC-0.86□□□□□ -2.55
SSSCA1O60232 Y_RNA.100-201ENST00000363141 102 ntBASIC-0.86□□□□□ -2.55
SSSCA1O60232 SNORD114-15-201ENST00000364687 72 ntBASIC-0.86□□□□□ -2.55
SSSCA1O60232 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.86□□□□□ -2.55
SSSCA1O60232 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.86□□□□□ -2.55
SSSCA1O60232 SNORA40.2-201ENST00000390847 128 ntBASIC-0.86□□□□□ -2.55
SSSCA1O60232 SNORA26.5-201ENST00000391215 123 ntBASIC-0.86□□□□□ -2.55
SSSCA1O60232 MTND1P14-201ENST00000427400 950 ntBASIC-0.86□□□□□ -2.55
SSSCA1O60232 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC-0.86□□□□□ -2.55
SSSCA1O60232 SCARNA18-201ENST00000459004 134 ntBASIC-0.86□□□□□ -2.55
SSSCA1O60232 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-0.86□□□□□ -2.55
SSSCA1O60232 MTND2P38-201ENST00000522536 667 ntBASIC-0.86□□□□□ -2.55
SSSCA1O60232 MIR548AD-201ENST00000584780 82 ntBASIC-0.86□□□□□ -2.55
SSSCA1O60232 MIR6507-201ENST00000613630 70 ntBASIC-0.86□□□□□ -2.55
SSSCA1O60232 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.87□□□□□ -2.55
SSSCA1O60232 RNU6-1266P-201ENST00000362794 105 ntBASIC-0.87□□□□□ -2.55
SSSCA1O60232 MIR562-201ENST00000384894 95 ntBASIC-0.87□□□□□ -2.55
SSSCA1O60232 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC-0.87□□□□□ -2.55
SSSCA1O60232 MLLT10P1-201ENST00000418346 262 ntBASIC-0.87□□□□□ -2.55
SSSCA1O60232 MTCO2P23-201ENST00000425216 680 ntBASIC-0.87□□□□□ -2.55
SSSCA1O60232 AL512326.2-201ENST00000426359 151 ntBASIC-0.87□□□□□ -2.55
SSSCA1O60232 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.87□□□□□ -2.55
SSSCA1O60232 SPINT5P-201ENST00000448174 155 ntBASIC-0.87□□□□□ -2.55
SSSCA1O60232 AL500527.2-201ENST00000454105 95 ntBASIC-0.87□□□□□ -2.55
SSSCA1O60232 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.87□□□□□ -2.55
SSSCA1O60232 RNU6-341P-201ENST00000516973 96 ntBASIC-0.87□□□□□ -2.55
SSSCA1O60232 CR383656.4-201ENST00000546909 122 ntBASIC-0.87□□□□□ -2.55
SSSCA1O60232 AC018448.1-201ENST00000552843 316 ntBASIC-0.87□□□□□ -2.55
SSSCA1O60232 AL139418.1-201ENST00000613613 177 ntBASIC-0.87□□□□□ -2.55
SSSCA1O60232 AC087588.2-201ENST00000617667 426 ntBASIC-0.87□□□□□ -2.55
SSSCA1O60232 AC027279.3-201ENST00000625055 122 ntBASIC-0.87□□□□□ -2.55
SSSCA1O60232 UGP2-231ENST00000627474 264 ntTSL 5 BASIC-0.87□□□□□ -2.55
SSSCA1O60232 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.87□□□□□ -2.55
SSSCA1O60232 RNU6-1322P-201ENST00000364309 107 ntBASIC-0.88□□□□□ -2.55
SSSCA1O60232 RNU6-396P-201ENST00000365369 105 ntBASIC-0.88□□□□□ -2.55
SSSCA1O60232 RNY3P5-201ENST00000384127 102 ntBASIC-0.88□□□□□ -2.55
SSSCA1O60232 RNU6-39P-201ENST00000384344 107 ntBASIC-0.88□□□□□ -2.55
SSSCA1O60232 RNU6-35P-201ENST00000384530 107 ntBASIC-0.88□□□□□ -2.55
SSSCA1O60232 RNU6-30P-201ENST00000384561 107 ntBASIC-0.88□□□□□ -2.55
SSSCA1O60232 Y_RNA.578-201ENST00000390903 88 ntBASIC-0.88□□□□□ -2.55
SSSCA1O60232 MTCO3P40-201ENST00000392516 676 ntBASIC-0.88□□□□□ -2.55
SSSCA1O60232 MRPS10P1-201ENST00000448483 130 ntBASIC-0.88□□□□□ -2.55
SSSCA1O60232 AL031274.1-201ENST00000450334 232 ntBASIC-0.88□□□□□ -2.55
SSSCA1O60232 snoU13.11-201ENST00000459219 104 ntBASIC-0.88□□□□□ -2.55
SSSCA1O60232 AL355375.2-201ENST00000574825 175 ntBASIC-0.88□□□□□ -2.55
SSSCA1O60232 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC-0.88□□□□□ -2.55
SSSCA1O60232 AC131235.4-201ENST00000609288 620 ntBASIC-0.88□□□□□ -2.55
SSSCA1O60232 MIR6738-201ENST00000619620 64 ntBASIC-0.88□□□□□ -2.55
SSSCA1O60232 AC134878.1-201ENST00000619901 243 ntBASIC-0.88□□□□□ -2.55
SSSCA1O60232 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC-0.88□□□□□ -2.55
SSSCA1O60232 MIR377-201ENST00000362145 69 ntBASIC-0.89□□□□□ -2.55
SSSCA1O60232 SNORD56.2-201ENST00000363242 71 ntBASIC-0.89□□□□□ -2.55
SSSCA1O60232 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.89□□□□□ -2.55
SSSCA1O60232 MIR136-201ENST00000385207 82 ntBASIC-0.89□□□□□ -2.55
SSSCA1O60232 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.89□□□□□ -2.55
SSSCA1O60232 AC243428.1-201ENST00000421099 264 ntBASIC-0.89□□□□□ -2.55
SSSCA1O60232 AL353572.1-201ENST00000442490 417 ntBASIC-0.89□□□□□ -2.55
SSSCA1O60232 RNU6-448P-201ENST00000517052 107 ntBASIC-0.89□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms