Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 MIR1302-9-201ENST00000408365 138 ntBASIC1.2□□□□□ -2.22
SNAI2O43623 MIR1302-10-201ENST00000408734 138 ntBASIC1.2□□□□□ -2.22
SNAI2O43623 SNORA11-201ENST00000408789 128 ntBASIC1.2□□□□□ -2.22
SNAI2O43623 RN7SKP192-201ENST00000411291 327 ntBASIC1.2□□□□□ -2.22
SNAI2O43623 MTCO3P19-201ENST00000415864 321 ntBASIC1.2□□□□□ -2.22
SNAI2O43623 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.2□□□□□ -2.22
SNAI2O43623 HMGN2P34-201ENST00000437647 269 ntBASIC1.2□□□□□ -2.22
SNAI2O43623 AC074290.1-201ENST00000448883 135 ntBASIC1.2□□□□□ -2.22
SNAI2O43623 SNORD65B-201ENST00000459126 73 ntBASIC1.2□□□□□ -2.22
SNAI2O43623 RPS26P55-201ENST00000471178 356 ntBASIC1.2□□□□□ -2.22
SNAI2O43623 SNORA25.10-201ENST00000515926 124 ntBASIC1.2□□□□□ -2.22
SNAI2O43623 RNU6-966P-201ENST00000516479 104 ntBASIC1.2□□□□□ -2.22
SNAI2O43623 AC027419.1-201ENST00000522976 328 ntBASIC1.2□□□□□ -2.22
SNAI2O43623 AC040926.1-201ENST00000530195 238 ntBASIC1.2□□□□□ -2.22
SNAI2O43623 SNORA77B-201ENST00000578179 125 ntBASIC1.2□□□□□ -2.22
SNAI2O43623 MIR5094-201ENST00000578766 85 ntBASIC1.2□□□□□ -2.22
SNAI2O43623 MIR1302-2-201ENST00000607096 138 ntBASIC1.2□□□□□ -2.22
SNAI2O43623 AL021879.1-201ENST00000611756 288 ntBASIC1.2□□□□□ -2.22
SNAI2O43623 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.2□□□□□ -2.22
SNAI2O43623 AC064859.1-201ENST00000624741 174 ntBASIC1.2□□□□□ -2.22
SNAI2O43623 IGHVIII-44-202ENST00000636235 289 ntBASIC1.2□□□□□ -2.22
SNAI2O43623 MIR338-201ENST00000636369 67 ntBASIC1.2□□□□□ -2.22
SNAI2O43623 MIR410-201ENST00000362222 80 ntBASIC1.19□□□□□ -2.22
SNAI2O43623 Y_RNA.101-201ENST00000363154 102 ntBASIC1.19□□□□□ -2.22
SNAI2O43623 RNU6-626P-201ENST00000363354 107 ntBASIC1.19□□□□□ -2.22
SNAI2O43623 RNU6-271P-201ENST00000363858 105 ntBASIC1.19□□□□□ -2.22
SNAI2O43623 RNU6-450P-201ENST00000364654 107 ntBASIC1.19□□□□□ -2.22
SNAI2O43623 RNU6-1240P-201ENST00000365155 104 ntBASIC1.19□□□□□ -2.22
SNAI2O43623 SNORD14.1-201ENST00000365609 90 ntBASIC1.19□□□□□ -2.22
SNAI2O43623 RNU6-20P-201ENST00000384106 107 ntBASIC1.19□□□□□ -2.22
SNAI2O43623 Y_RNA.458-201ENST00000384240 102 ntBASIC1.19□□□□□ -2.22
SNAI2O43623 Y_RNA.510-201ENST00000384511 114 ntBASIC1.19□□□□□ -2.22
SNAI2O43623 RNU6-417P-201ENST00000384712 107 ntBASIC1.19□□□□□ -2.22
SNAI2O43623 RNA5SP467-201ENST00000391274 118 ntBASIC1.19□□□□□ -2.22
SNAI2O43623 RNU6-130P-201ENST00000411112 103 ntBASIC1.19□□□□□ -2.22
SNAI2O43623 RN7SKP101-201ENST00000411376 320 ntBASIC1.19□□□□□ -2.22
SNAI2O43623 CST2P1-201ENST00000425770 87 ntBASIC1.19□□□□□ -2.22
SNAI2O43623 TOMM22P2-201ENST00000430735 237 ntBASIC1.19□□□□□ -2.22
SNAI2O43623 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.19□□□□□ -2.22
SNAI2O43623 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.19□□□□□ -2.22
SNAI2O43623 FCF1P4-201ENST00000448326 183 ntBASIC1.19□□□□□ -2.22
SNAI2O43623 RNU6-1137P-201ENST00000517073 99 ntBASIC1.19□□□□□ -2.22
SNAI2O43623 SUMO2P18-201ENST00000518873 252 ntBASIC1.19□□□□□ -2.22
SNAI2O43623 AC023442.1-201ENST00000531247 422 ntBASIC1.19□□□□□ -2.22
SNAI2O43623 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.19□□□□□ -2.22
SNAI2O43623 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.19□□□□□ -2.22
SNAI2O43623 AC074050.1-201ENST00000563247 211 ntBASIC1.19□□□□□ -2.22
SNAI2O43623 AL356055.1-201ENST00000602528 446 ntBASIC1.19□□□□□ -2.22
SNAI2O43623 PART1_1.1-201ENST00000611761 217 ntBASIC1.19□□□□□ -2.22
SNAI2O43623 AC004467.1-201ENST00000615678 330 ntBASIC1.19□□□□□ -2.22
SNAI2O43623 MIR3674-201ENST00000636576 68 ntBASIC1.19□□□□□ -2.22
SNAI2O43623 AP000648.3-201ENST00000623539 4507 ntBASIC1.18□□□□□ -2.22
SNAI2O43623 MIR26B-201ENST00000362251 77 ntBASIC1.18□□□□□ -2.22
SNAI2O43623 snoU2-30.2-201ENST00000362805 70 ntBASIC1.18□□□□□ -2.22
SNAI2O43623 RNU6-112P-201ENST00000363599 104 ntBASIC1.18□□□□□ -2.22
SNAI2O43623 RNU1-96P-201ENST00000364163 162 ntBASIC1.18□□□□□ -2.22
SNAI2O43623 RNU6-1227P-201ENST00000383981 107 ntBASIC1.18□□□□□ -2.22
SNAI2O43623 RNU6-939P-201ENST00000384634 107 ntBASIC1.18□□□□□ -2.22
SNAI2O43623 RNU6-360P-201ENST00000390944 104 ntBASIC1.18□□□□□ -2.22
SNAI2O43623 MRPL42P3-201ENST00000401492 326 ntBASIC1.18□□□□□ -2.22
SNAI2O43623 AL355796.1-201ENST00000406706 323 ntBASIC1.18□□□□□ -2.22
SNAI2O43623 EBAG9P1-201ENST00000418955 543 ntBASIC1.18□□□□□ -2.22
SNAI2O43623 AC005534.2-201ENST00000431047 433 ntBASIC1.18□□□□□ -2.22
SNAI2O43623 AC245047.4-201ENST00000433189 144 ntBASIC1.18□□□□□ -2.22
SNAI2O43623 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.18□□□□□ -2.22
SNAI2O43623 JTBP1-201ENST00000441314 247 ntBASIC1.18□□□□□ -2.22
SNAI2O43623 AC023790.1-201ENST00000482174 347 ntBASIC1.18□□□□□ -2.22
SNAI2O43623 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.18□□□□□ -2.22
SNAI2O43623 RNU6-475P-201ENST00000516073 104 ntBASIC1.18□□□□□ -2.22
SNAI2O43623 RNU6-988P-201ENST00000519081 107 ntBASIC1.18□□□□□ -2.22
SNAI2O43623 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.18□□□□□ -2.22
SNAI2O43623 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.18□□□□□ -2.22
SNAI2O43623 AC008269.2-201ENST00000561915 1105 ntBASIC1.18□□□□□ -2.22
SNAI2O43623 MIR4255-201ENST00000579351 72 ntBASIC1.18□□□□□ -2.22
SNAI2O43623 AL353149.1-201ENST00000610667 244 ntBASIC1.18□□□□□ -2.22
SNAI2O43623 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.18□□□□□ -2.22
SNAI2O43623 AC010205.1-201ENST00000616668 449 ntBASIC1.18□□□□□ -2.22
SNAI2O43623 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
SNAI2O43623 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.18□□□□□ -2.22
SNAI2O43623 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
SNAI2O43623 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
SNAI2O43623 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
SNAI2O43623 SNORA20B-201ENST00000384220 132 ntBASIC1.17□□□□□ -2.22
SNAI2O43623 RNU6-823P-201ENST00000391042 103 ntBASIC1.17□□□□□ -2.22
SNAI2O43623 MRPL35P1-201ENST00000404272 572 ntBASIC1.17□□□□□ -2.22
SNAI2O43623 RNA5SP475-201ENST00000410568 110 ntBASIC1.17□□□□□ -2.22
SNAI2O43623 RNU6-1199P-201ENST00000411249 104 ntBASIC1.17□□□□□ -2.22
SNAI2O43623 RPL30P7-201ENST00000479312 323 ntBASIC1.17□□□□□ -2.22
SNAI2O43623 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.17□□□□□ -2.22
SNAI2O43623 RPS29P30-201ENST00000600975 111 ntBASIC1.17□□□□□ -2.22
SNAI2O43623 AC124312.5-201ENST00000604451 268 ntBASIC1.17□□□□□ -2.22
SNAI2O43623 AC040896.1-201ENST00000613819 479 ntBASIC1.17□□□□□ -2.22
SNAI2O43623 AL138825.1-201ENST00000618587 192 ntBASIC1.17□□□□□ -2.22
SNAI2O43623 AC084768.2-201ENST00000622736 221 ntBASIC1.17□□□□□ -2.22
SNAI2O43623 U6.115-201ENST00000636045 103 ntBASIC1.17□□□□□ -2.22
SNAI2O43623 U6.108-201ENST00000637764 58 ntBASIC1.17□□□□□ -2.22
SNAI2O43623 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
SNAI2O43623 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
SNAI2O43623 Y_RNA.424-201ENST00000384063 103 ntBASIC1.16□□□□□ -2.22
SNAI2O43623 Y_RNA.471-201ENST00000384312 102 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 189.6 ms