Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 Y_RNA.797-201ENST00000515977 94 ntBASIC2.87□□□□□ -1.95
FOXN1O15353 RNA5SP480-201ENST00000516840 109 ntBASIC2.87□□□□□ -1.95
FOXN1O15353 AC090616.3-201ENST00000582184 217 ntBASIC2.87□□□□□ -1.95
FOXN1O15353 AL356575.1-201ENST00000603008 283 ntBASIC2.87□□□□□ -1.95
FOXN1O15353 MIR3674-201ENST00000636576 68 ntBASIC2.87□□□□□ -1.95
FOXN1O15353 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
FOXN1O15353 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
FOXN1O15353 AC068700.1-201ENST00000565862 3754 ntBASIC2.87□□□□□ -1.95
FOXN1O15353 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.86□□□□□ -1.95
FOXN1O15353 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
FOXN1O15353 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
FOXN1O15353 RNY1P10-201ENST00000363268 113 ntBASIC2.86□□□□□ -1.95
FOXN1O15353 SNORA14A-201ENST00000364773 135 ntBASIC2.86□□□□□ -1.95
FOXN1O15353 U8.9-201ENST00000365667 134 ntBASIC2.86□□□□□ -1.95
FOXN1O15353 SNORA40-201ENST00000388090 126 ntBASIC2.86□□□□□ -1.95
FOXN1O15353 RNA5SP252-201ENST00000391131 119 ntBASIC2.86□□□□□ -1.95
FOXN1O15353 RNA5SP475-201ENST00000410568 110 ntBASIC2.86□□□□□ -1.95
FOXN1O15353 AC096649.2-201ENST00000416186 393 ntBASIC2.86□□□□□ -1.95
FOXN1O15353 MTND4LP9-201ENST00000427694 174 ntBASIC2.86□□□□□ -1.95
FOXN1O15353 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.86□□□□□ -1.95
FOXN1O15353 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
FOXN1O15353 RNU6-436P-201ENST00000516171 114 ntBASIC2.86□□□□□ -1.95
FOXN1O15353 SNORD59.2-201ENST00000516873 68 ntBASIC2.86□□□□□ -1.95
FOXN1O15353 RNU6-971P-201ENST00000516920 106 ntBASIC2.86□□□□□ -1.95
FOXN1O15353 RNA5SP490-201ENST00000517141 136 ntBASIC2.86□□□□□ -1.95
FOXN1O15353 AC100767.1-201ENST00000528178 123 ntBASIC2.86□□□□□ -1.95
FOXN1O15353 AC021269.2-201ENST00000532318 330 ntBASIC2.86□□□□□ -1.95
FOXN1O15353 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.86□□□□□ -1.95
FOXN1O15353 AC009127.3-201ENST00000570531 403 ntBASIC2.86□□□□□ -1.95
FOXN1O15353 RNU6-801P-201ENST00000364087 105 ntBASIC2.85□□□□□ -1.95
FOXN1O15353 Y_RNA.218-201ENST00000364218 104 ntBASIC2.85□□□□□ -1.95
FOXN1O15353 SNORA20-201ENST00000384662 132 ntBASIC2.85□□□□□ -1.95
FOXN1O15353 SNORA17.3-201ENST00000391159 129 ntBASIC2.85□□□□□ -1.95
FOXN1O15353 RNU6-381P-201ENST00000391259 108 ntBASIC2.85□□□□□ -1.95
FOXN1O15353 SNORA26.7-201ENST00000391288 122 ntBASIC2.85□□□□□ -1.95
FOXN1O15353 NDUFS5P4-201ENST00000412983 318 ntBASIC2.85□□□□□ -1.95
FOXN1O15353 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.85□□□□□ -1.95
FOXN1O15353 AC090897.2-201ENST00000581715 130 ntBASIC2.85□□□□□ -1.95
FOXN1O15353 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.85□□□□□ -1.95
FOXN1O15353 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.85□□□□□ -1.95
FOXN1O15353 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
FOXN1O15353 AC007256.1-201ENST00000392253 2765 ntBASIC2.85□□□□□ -1.95
FOXN1O15353 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
FOXN1O15353 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
FOXN1O15353 Y_RNA.71-201ENST00000362892 104 ntBASIC2.84□□□□□ -1.95
FOXN1O15353 Y_RNA.127-201ENST00000363386 109 ntBASIC2.84□□□□□ -1.95
FOXN1O15353 RNU6-324P-201ENST00000363957 106 ntBASIC2.84□□□□□ -1.95
FOXN1O15353 RNU6-454P-201ENST00000364292 107 ntBASIC2.84□□□□□ -1.95
FOXN1O15353 RNU4-10P-201ENST00000364383 140 ntBASIC2.84□□□□□ -1.95
FOXN1O15353 Y_RNA.273-201ENST00000364703 102 ntBASIC2.84□□□□□ -1.95
FOXN1O15353 RNU4-11P-201ENST00000365287 132 ntBASIC2.84□□□□□ -1.95
FOXN1O15353 RNU6-245P-201ENST00000384020 107 ntBASIC2.84□□□□□ -1.95
FOXN1O15353 RNU6-622P-201ENST00000384272 103 ntBASIC2.84□□□□□ -1.95
FOXN1O15353 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.84□□□□□ -1.95
FOXN1O15353 U3.40-201ENST00000408706 208 ntBASIC2.84□□□□□ -1.95
FOXN1O15353 RNA5SP390-201ENST00000410191 113 ntBASIC2.84□□□□□ -1.95
FOXN1O15353 EBAG9P1-201ENST00000418955 543 ntBASIC2.84□□□□□ -1.95
FOXN1O15353 AL135790.2-201ENST00000437701 267 ntBASIC2.84□□□□□ -1.95
FOXN1O15353 HMGN2P10-201ENST00000448085 265 ntBASIC2.84□□□□□ -1.95
FOXN1O15353 AC012308.1-201ENST00000451232 178 ntBASIC2.84□□□□□ -1.95
FOXN1O15353 AL137159.1-201ENST00000452808 512 ntBASIC2.84□□□□□ -1.95
FOXN1O15353 RPL26P9-201ENST00000457466 433 ntBASIC2.84□□□□□ -1.95
FOXN1O15353 RNU6-1333P-201ENST00000516162 93 ntBASIC2.84□□□□□ -1.95
FOXN1O15353 SNORA25.12-201ENST00000516202 82 ntBASIC2.84□□□□□ -1.95
FOXN1O15353 RNU2-12P-201ENST00000517216 168 ntBASIC2.84□□□□□ -1.95
FOXN1O15353 AC022616.8-201ENST00000533569 253 ntBASIC2.84□□□□□ -1.95
FOXN1O15353 AC004486.1-201ENST00000546846 233 ntBASIC2.84□□□□□ -1.95
FOXN1O15353 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.84□□□□□ -1.95
FOXN1O15353 AC021739.1-201ENST00000559631 174 ntBASIC2.84□□□□□ -1.95
FOXN1O15353 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.84□□□□□ -1.95
FOXN1O15353 MIR3658-201ENST00000636291 56 ntBASIC2.84□□□□□ -1.95
FOXN1O15353 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
FOXN1O15353 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.84□□□□□ -1.96
FOXN1O15353 AC103988.1-201ENST00000566382 2177 ntBASIC2.84□□□□□ -1.96
FOXN1O15353 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.83□□□□□ -1.96
FOXN1O15353 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
FOXN1O15353 MIR378A-201ENST00000362177 66 ntBASIC2.83□□□□□ -1.96
FOXN1O15353 Y_RNA.224-201ENST00000364308 111 ntBASIC2.83□□□□□ -1.96
FOXN1O15353 snoU2_19.4-201ENST00000364329 80 ntBASIC2.83□□□□□ -1.96
FOXN1O15353 Y_RNA.572-201ENST00000384757 98 ntBASIC2.83□□□□□ -1.96
FOXN1O15353 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
FOXN1O15353 RNU6-578P-201ENST00000390980 103 ntBASIC2.83□□□□□ -1.96
FOXN1O15353 SNORA26.5-201ENST00000391215 123 ntBASIC2.83□□□□□ -1.96
FOXN1O15353 AL035461.1-201ENST00000421490 332 ntBASIC2.83□□□□□ -1.96
FOXN1O15353 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.83□□□□□ -1.96
FOXN1O15353 snoU13.28-201ENST00000459235 104 ntBASIC2.83□□□□□ -1.96
FOXN1O15353 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.83□□□□□ -1.96
FOXN1O15353 MIR449C-201ENST00000516047 92 ntBASIC2.83□□□□□ -1.96
FOXN1O15353 RNU6-1234P-201ENST00000516877 103 ntBASIC2.83□□□□□ -1.96
FOXN1O15353 RNU6-711P-201ENST00000517255 106 ntBASIC2.83□□□□□ -1.96
FOXN1O15353 MIR4431-201ENST00000579990 94 ntBASIC2.83□□□□□ -1.96
FOXN1O15353 MIR4744-201ENST00000581563 82 ntBASIC2.83□□□□□ -1.96
FOXN1O15353 SNORA4-201ENST00000584302 138 ntBASIC2.83□□□□□ -1.96
FOXN1O15353 AL359881.1-201ENST00000602916 267 ntBASIC2.83□□□□□ -1.96
FOXN1O15353 AC006380.1-201ENST00000603598 186 ntBASIC2.83□□□□□ -1.96
FOXN1O15353 AC069294.1-201ENST00000608397 350 ntBASIC2.83□□□□□ -1.96
FOXN1O15353 AC073308.1-201ENST00000623696 305 ntBASIC2.83□□□□□ -1.96
FOXN1O15353 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.83□□□□□ -1.96
FOXN1O15353 AC134026.1-201ENST00000623249 2239 ntBASIC2.83□□□□□ -1.96
FOXN1O15353 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms