Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 SNORA9.1-201ENST00000362412 131 ntBASIC-0.34□□□□□ -2.46
HMGB3O15347 RNU6-727P-201ENST00000363592 107 ntBASIC-0.34□□□□□ -2.46
HMGB3O15347 RNU6-873P-201ENST00000363833 107 ntBASIC-0.34□□□□□ -2.46
HMGB3O15347 U8.5-201ENST00000364528 136 ntBASIC-0.34□□□□□ -2.46
HMGB3O15347 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-0.34□□□□□ -2.46
HMGB3O15347 RNY1P14-201ENST00000384426 108 ntBASIC-0.34□□□□□ -2.46
HMGB3O15347 MIR598-201ENST00000384868 97 ntBASIC-0.34□□□□□ -2.46
HMGB3O15347 RNU2-59P-201ENST00000410482 191 ntBASIC-0.34□□□□□ -2.46
HMGB3O15347 AC098592.1-201ENST00000419352 333 ntBASIC-0.34□□□□□ -2.46
HMGB3O15347 RNU7-56P-201ENST00000458744 62 ntBASIC-0.34□□□□□ -2.46
HMGB3O15347 SNORD123-201ENST00000459473 70 ntBASIC-0.34□□□□□ -2.46
HMGB3O15347 AC091179.3-201ENST00000474761 144 ntBASIC-0.34□□□□□ -2.46
HMGB3O15347 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-0.34□□□□□ -2.46
HMGB3O15347 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-0.34□□□□□ -2.46
HMGB3O15347 AL355375.2-201ENST00000574825 175 ntBASIC-0.34□□□□□ -2.46
HMGB3O15347 CPDP1-201ENST00000579660 283 ntBASIC-0.34□□□□□ -2.46
HMGB3O15347 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-0.34□□□□□ -2.46
HMGB3O15347 MIR4305-201ENST00000583252 102 ntBASIC-0.34□□□□□ -2.46
HMGB3O15347 MIR4762-201ENST00000585261 75 ntBASIC-0.34□□□□□ -2.46
HMGB3O15347 AC104260.1-201ENST00000616660 539 ntBASIC-0.34□□□□□ -2.46
HMGB3O15347 AC091925.1-201ENST00000623204 462 ntBASIC-0.34□□□□□ -2.46
HMGB3O15347 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.34□□□□□ -2.46
HMGB3O15347 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.35□□□□□ -2.47
HMGB3O15347 MIR330-201ENST00000362196 94 ntBASIC-0.35□□□□□ -2.47
HMGB3O15347 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.35□□□□□ -2.47
HMGB3O15347 RNU5F-7P-201ENST00000363696 115 ntBASIC-0.35□□□□□ -2.47
HMGB3O15347 RNU6-934P-201ENST00000365154 107 ntBASIC-0.35□□□□□ -2.47
HMGB3O15347 RNU6-903P-201ENST00000391270 109 ntBASIC-0.35□□□□□ -2.47
HMGB3O15347 RNU6-195P-201ENST00000411352 109 ntBASIC-0.35□□□□□ -2.47
HMGB3O15347 AC018865.2-201ENST00000423631 129 ntBASIC-0.35□□□□□ -2.47
HMGB3O15347 AL359672.1-201ENST00000442302 409 ntBASIC-0.35□□□□□ -2.47
HMGB3O15347 snoU13.21-201ENST00000459368 105 ntBASIC-0.35□□□□□ -2.47
HMGB3O15347 Y_RNA.638-201ENST00000459374 113 ntBASIC-0.35□□□□□ -2.47
HMGB3O15347 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.35□□□□□ -2.47
HMGB3O15347 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.35□□□□□ -2.47
HMGB3O15347 SNORA14.1-201ENST00000516113 141 ntBASIC-0.35□□□□□ -2.47
HMGB3O15347 AC091144.1-201ENST00000519573 138 ntBASIC-0.35□□□□□ -2.47
HMGB3O15347 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC-0.35□□□□□ -2.47
HMGB3O15347 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-0.35□□□□□ -2.47
HMGB3O15347 MTND1P8-201ENST00000571424 950 ntBASIC-0.35□□□□□ -2.47
HMGB3O15347 MIR5583-1-201ENST00000580941 59 ntBASIC-0.35□□□□□ -2.47
HMGB3O15347 AC012433.1-201ENST00000588916 398 ntBASIC-0.35□□□□□ -2.47
HMGB3O15347 AC018645.2-201ENST00000609151 472 ntBASIC-0.35□□□□□ -2.47
HMGB3O15347 AP000240.1-201ENST00000609910 452 ntBASIC-0.35□□□□□ -2.47
HMGB3O15347 MIR377-201ENST00000362145 69 ntBASIC-0.36□□□□□ -2.47
HMGB3O15347 SNORD115-32-201ENST00000364079 82 ntBASIC-0.36□□□□□ -2.47
HMGB3O15347 RNU6-396P-201ENST00000365369 105 ntBASIC-0.36□□□□□ -2.47
HMGB3O15347 RNU6-117P-201ENST00000365415 107 ntBASIC-0.36□□□□□ -2.47
HMGB3O15347 RNU6-1329P-201ENST00000365664 107 ntBASIC-0.36□□□□□ -2.47
HMGB3O15347 MIR610-201ENST00000385139 96 ntBASIC-0.36□□□□□ -2.47
HMGB3O15347 MIR644A-201ENST00000385262 94 ntBASIC-0.36□□□□□ -2.47
HMGB3O15347 AL353997.1-201ENST00000432936 108 ntBASIC-0.36□□□□□ -2.47
HMGB3O15347 AL137792.2-201ENST00000443484 235 ntBASIC-0.36□□□□□ -2.47
HMGB3O15347 AC091885.1-201ENST00000506658 268 ntBASIC-0.36□□□□□ -2.47
HMGB3O15347 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.36□□□□□ -2.47
HMGB3O15347 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.36□□□□□ -2.47
HMGB3O15347 AL158209.2-201ENST00000619266 216 ntBASIC-0.36□□□□□ -2.47
HMGB3O15347 AC010608.3-201ENST00000625048 527 ntBASIC-0.36□□□□□ -2.47
HMGB3O15347 SNORA27.1-201ENST00000362604 124 ntBASIC-0.37□□□□□ -2.47
HMGB3O15347 SNORD68-201ENST00000363214 84 ntBASIC-0.37□□□□□ -2.47
HMGB3O15347 MTCO2P11-201ENST00000431069 680 ntBASIC-0.37□□□□□ -2.47
HMGB3O15347 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC-0.37□□□□□ -2.47
HMGB3O15347 MTND1P26-201ENST00000440488 538 ntBASIC-0.37□□□□□ -2.47
HMGB3O15347 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC-0.37□□□□□ -2.47
HMGB3O15347 MIR3684-201ENST00000579779 74 ntBASIC-0.37□□□□□ -2.47
HMGB3O15347 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC-0.37□□□□□ -2.47
HMGB3O15347 MIR1295B-201ENST00000636144 60 ntBASIC-0.37□□□□□ -2.47
HMGB3O15347 Y_RNA.319-201ENST00000365138 92 ntBASIC-0.38□□□□□ -2.47
HMGB3O15347 Y_RNA.370-201ENST00000365589 108 ntBASIC-0.38□□□□□ -2.47
HMGB3O15347 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.38□□□□□ -2.47
HMGB3O15347 MIR193B-201ENST00000384907 83 ntBASIC-0.38□□□□□ -2.47
HMGB3O15347 MIR145-201ENST00000384967 88 ntBASIC-0.38□□□□□ -2.47
HMGB3O15347 MT-TN-201ENST00000387400 73 ntBASIC-0.38□□□□□ -2.47
HMGB3O15347 AL008987.1-201ENST00000415528 237 ntBASIC-0.38□□□□□ -2.47
HMGB3O15347 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.38□□□□□ -2.47
HMGB3O15347 ZNF114P1-201ENST00000453500 292 ntBASIC-0.38□□□□□ -2.47
HMGB3O15347 AC018710.1-201ENST00000506509 158 ntBASIC-0.38□□□□□ -2.47
HMGB3O15347 AC093303.1-201ENST00000514549 295 ntBASIC-0.38□□□□□ -2.47
HMGB3O15347 AC104576.1-201ENST00000524225 88 ntBASIC-0.38□□□□□ -2.47
HMGB3O15347 RN7SL793P-201ENST00000583259 296 ntBASIC-0.38□□□□□ -2.47
HMGB3O15347 MIR4743-201ENST00000584576 69 ntBASIC-0.38□□□□□ -2.47
HMGB3O15347 AF250324.2-201ENST00000608299 610 ntBASIC-0.38□□□□□ -2.47
HMGB3O15347 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.39□□□□□ -2.47
HMGB3O15347 MTATP6P14-201ENST00000455189 673 ntBASIC-0.39□□□□□ -2.47
HMGB3O15347 RNU7-180P-201ENST00000459240 63 ntBASIC-0.39□□□□□ -2.47
HMGB3O15347 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC-0.39□□□□□ -2.47
HMGB3O15347 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.39□□□□□ -2.47
HMGB3O15347 MIR4771-2-201ENST00000577758 74 ntBASIC-0.39□□□□□ -2.47
HMGB3O15347 MIR4771-1-201ENST00000582617 74 ntBASIC-0.39□□□□□ -2.47
HMGB3O15347 MIR4676-201ENST00000583078 72 ntBASIC-0.39□□□□□ -2.47
HMGB3O15347 AL022161.1-201ENST00000604390 213 ntBASIC-0.39□□□□□ -2.47
HMGB3O15347 HULC.1-201ENST00000612720 240 ntBASIC-0.39□□□□□ -2.47
HMGB3O15347 AC009161.2-201ENST00000624626 138 ntBASIC-0.39□□□□□ -2.47
HMGB3O15347 SNORD45.3-201ENST00000363836 72 ntBASIC-0.4□□□□□ -2.47
HMGB3O15347 RNU6-280P-201ENST00000364145 104 ntBASIC-0.4□□□□□ -2.47
HMGB3O15347 RNU6-407P-201ENST00000365280 104 ntBASIC-0.4□□□□□ -2.47
HMGB3O15347 MIR521-1-201ENST00000384902 87 ntBASIC-0.4□□□□□ -2.47
HMGB3O15347 MIR122-201ENST00000385044 85 ntBASIC-0.4□□□□□ -2.47
HMGB3O15347 MIR214-201ENST00000385214 110 ntBASIC-0.4□□□□□ -2.47
HMGB3O15347 SNORA40.4-201ENST00000390971 128 ntBASIC-0.4□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms