Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 RNU6-926P-201ENST00000384075 107 ntBASIC1.92□□□□□ -2.1
ATP2A1O14983 Y_RNA.485-201ENST00000384395 102 ntBASIC1.92□□□□□ -2.1
ATP2A1O14983 AL117342.1-201ENST00000404861 406 ntBASIC1.92□□□□□ -2.1
ATP2A1O14983 RPL23AP36-201ENST00000413895 458 ntBASIC1.92□□□□□ -2.1
ATP2A1O14983 AC010469.2-201ENST00000496412 480 ntBASIC1.92□□□□□ -2.1
ATP2A1O14983 RNU6-408P-201ENST00000515910 100 ntBASIC1.92□□□□□ -2.1
ATP2A1O14983 RNU6-988P-201ENST00000519081 107 ntBASIC1.92□□□□□ -2.1
ATP2A1O14983 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.92□□□□□ -2.1
ATP2A1O14983 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.92□□□□□ -2.1
ATP2A1O14983 AC020661.2-201ENST00000560114 134 ntBASIC1.92□□□□□ -2.1
ATP2A1O14983 MIR4659A-201ENST00000580269 81 ntBASIC1.92□□□□□ -2.1
ATP2A1O14983 MIR3618-201ENST00000580330 88 ntBASIC1.92□□□□□ -2.1
ATP2A1O14983 MIR4303-201ENST00000581299 66 ntBASIC1.92□□□□□ -2.1
ATP2A1O14983 AC044792.1-201ENST00000593294 196 ntBASIC1.92□□□□□ -2.1
ATP2A1O14983 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.92□□□□□ -2.1
ATP2A1O14983 MIR3674-201ENST00000636576 68 ntBASIC1.92□□□□□ -2.1
ATP2A1O14983 snoU2-30.2-201ENST00000362805 70 ntBASIC1.91□□□□□ -2.1
ATP2A1O14983 RNU6-1310P-201ENST00000384153 107 ntBASIC1.91□□□□□ -2.1
ATP2A1O14983 MIR1253-201ENST00000408273 105 ntBASIC1.91□□□□□ -2.1
ATP2A1O14983 HMGN2P34-201ENST00000437647 269 ntBASIC1.91□□□□□ -2.1
ATP2A1O14983 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.91□□□□□ -2.1
ATP2A1O14983 Y_RNA.676-201ENST00000516393 96 ntBASIC1.91□□□□□ -2.1
ATP2A1O14983 MIR3684-201ENST00000579779 74 ntBASIC1.91□□□□□ -2.1
ATP2A1O14983 MIR3171-201ENST00000584270 74 ntBASIC1.91□□□□□ -2.1
ATP2A1O14983 RPS29P30-201ENST00000600975 111 ntBASIC1.91□□□□□ -2.1
ATP2A1O14983 AC240442.1-201ENST00000616055 283 ntBASIC1.91□□□□□ -2.1
ATP2A1O14983 AC010205.1-201ENST00000616668 449 ntBASIC1.91□□□□□ -2.1
ATP2A1O14983 MIR338-201ENST00000636369 67 ntBASIC1.91□□□□□ -2.1
ATP2A1O14983 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.91□□□□□ -2.1
ATP2A1O14983 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.91□□□□□ -2.1
ATP2A1O14983 RNU6-961P-201ENST00000363893 105 ntBASIC1.9□□□□□ -2.11
ATP2A1O14983 SNORD14.1-201ENST00000365609 90 ntBASIC1.9□□□□□ -2.11
ATP2A1O14983 RNA5SP475-201ENST00000410568 110 ntBASIC1.9□□□□□ -2.11
ATP2A1O14983 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.9□□□□□ -2.11
ATP2A1O14983 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.9□□□□□ -2.11
ATP2A1O14983 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.9□□□□□ -2.11
ATP2A1O14983 CST2P1-201ENST00000425770 87 ntBASIC1.9□□□□□ -2.11
ATP2A1O14983 AC099677.2-201ENST00000436385 175 ntBASIC1.9□□□□□ -2.11
ATP2A1O14983 MTCYBP6-201ENST00000441810 138 ntBASIC1.9□□□□□ -2.11
ATP2A1O14983 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.9□□□□□ -2.11
ATP2A1O14983 HMGB3P17-201ENST00000504195 649 ntBASIC1.9□□□□□ -2.11
ATP2A1O14983 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
ATP2A1O14983 AC108729.3-201ENST00000513484 108 ntBASIC1.9□□□□□ -2.11
ATP2A1O14983 RNU6-1053P-201ENST00000515930 101 ntBASIC1.9□□□□□ -2.11
ATP2A1O14983 RNVU1-2-201ENST00000516326 135 ntBASIC1.9□□□□□ -2.11
ATP2A1O14983 AC040926.1-201ENST00000530195 238 ntBASIC1.9□□□□□ -2.11
ATP2A1O14983 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.9□□□□□ -2.11
ATP2A1O14983 AP002001.1-203ENST00000534002 267 ntBASIC1.9□□□□□ -2.11
ATP2A1O14983 AC022432.1-201ENST00000595739 310 ntBASIC1.9□□□□□ -2.11
ATP2A1O14983 AL121655.1-201ENST00000605811 308 ntBASIC1.9□□□□□ -2.11
ATP2A1O14983 AC091812.1-201ENST00000432235 1948 ntBASIC1.89□□□□□ -2.11
ATP2A1O14983 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
ATP2A1O14983 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
ATP2A1O14983 RNU6-862P-201ENST00000362804 105 ntBASIC1.89□□□□□ -2.11
ATP2A1O14983 RNU4-50P-201ENST00000364361 141 ntBASIC1.89□□□□□ -2.11
ATP2A1O14983 SNORD48-201ENST00000364953 64 ntBASIC1.89□□□□□ -2.11
ATP2A1O14983 SNORA22B-201ENST00000383876 138 ntBASIC1.89□□□□□ -2.11
ATP2A1O14983 RNU6-1227P-201ENST00000383981 107 ntBASIC1.89□□□□□ -2.11
ATP2A1O14983 MIR515-2-201ENST00000384883 83 ntBASIC1.89□□□□□ -2.11
ATP2A1O14983 MIR515-1-201ENST00000384884 83 ntBASIC1.89□□□□□ -2.11
ATP2A1O14983 RNA5SP212-201ENST00000391223 107 ntBASIC1.89□□□□□ -2.11
ATP2A1O14983 AC244636.1-201ENST00000421152 228 ntBASIC1.89□□□□□ -2.11
ATP2A1O14983 AL163540.1-201ENST00000485382 386 ntBASIC1.89□□□□□ -2.11
ATP2A1O14983 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.89□□□□□ -2.11
ATP2A1O14983 AL390123.1-201ENST00000603216 237 ntBASIC1.89□□□□□ -2.11
ATP2A1O14983 AC012493.3-201ENST00000604494 112 ntBASIC1.89□□□□□ -2.11
ATP2A1O14983 AC069114.2-201ENST00000604699 304 ntBASIC1.89□□□□□ -2.11
ATP2A1O14983 AC011476.5-201ENST00000615594 130 ntBASIC1.89□□□□□ -2.11
ATP2A1O14983 AC006435.5-201ENST00000624486 112 ntBASIC1.89□□□□□ -2.11
ATP2A1O14983 Y_RNA.4-201ENST00000362333 112 ntBASIC1.88□□□□□ -2.11
ATP2A1O14983 RNU1-96P-201ENST00000364163 162 ntBASIC1.88□□□□□ -2.11
ATP2A1O14983 AC117470.1-201ENST00000381974 330 ntBASIC1.88□□□□□ -2.11
ATP2A1O14983 Y_RNA.424-201ENST00000384063 103 ntBASIC1.88□□□□□ -2.11
ATP2A1O14983 SNORA8-201ENST00000384574 139 ntBASIC1.88□□□□□ -2.11
ATP2A1O14983 MTND1P14-201ENST00000427400 950 ntBASIC1.88□□□□□ -2.11
ATP2A1O14983 AC005534.2-201ENST00000431047 433 ntBASIC1.88□□□□□ -2.11
ATP2A1O14983 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.88□□□□□ -2.11
ATP2A1O14983 AL356055.1-201ENST00000602528 446 ntBASIC1.88□□□□□ -2.11
ATP2A1O14983 RNU6-454P-201ENST00000364292 107 ntBASIC1.87□□□□□ -2.11
ATP2A1O14983 Y_RNA.287-201ENST00000364853 94 ntBASIC1.87□□□□□ -2.11
ATP2A1O14983 SNORA72.2-201ENST00000365028 127 ntBASIC1.87□□□□□ -2.11
ATP2A1O14983 Y_RNA.458-201ENST00000384240 102 ntBASIC1.87□□□□□ -2.11
ATP2A1O14983 MRPL42P3-201ENST00000401492 326 ntBASIC1.87□□□□□ -2.11
ATP2A1O14983 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.87□□□□□ -2.11
ATP2A1O14983 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.87□□□□□ -2.11
ATP2A1O14983 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.87□□□□□ -2.11
ATP2A1O14983 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.87□□□□□ -2.11
ATP2A1O14983 SNORD65B-201ENST00000459126 73 ntBASIC1.87□□□□□ -2.11
ATP2A1O14983 Y_RNA.713-201ENST00000517013 96 ntBASIC1.87□□□□□ -2.11
ATP2A1O14983 AC022616.4-201ENST00000522985 181 ntBASIC1.87□□□□□ -2.11
ATP2A1O14983 DNAJC19P9-201ENST00000555084 351 ntBASIC1.87□□□□□ -2.11
ATP2A1O14983 SUB1P4-201ENST00000566062 339 ntBASIC1.87□□□□□ -2.11
ATP2A1O14983 MIR3122-201ENST00000577243 73 ntBASIC1.87□□□□□ -2.11
ATP2A1O14983 MIR5094-201ENST00000578766 85 ntBASIC1.87□□□□□ -2.11
ATP2A1O14983 Y_RNA.772-201ENST00000606692 102 ntBASIC1.87□□□□□ -2.11
ATP2A1O14983 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.87□□□□□ -2.11
ATP2A1O14983 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.87□□□□□ -2.11
ATP2A1O14983 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.87□□□□□ -2.11
ATP2A1O14983 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
ATP2A1O14983 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms