Protein–RNA interactions for Protein: O14545

TRAFD1, TRAF-type zinc finger domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1O14545 Y_RNA.711-201ENST00000516993 102 ntBASIC1.61□□□□□ -2.15
TRAFD1O14545 AC040926.1-201ENST00000530195 238 ntBASIC1.61□□□□□ -2.15
TRAFD1O14545 GNAI2P1-201ENST00000541815 315 ntBASIC1.61□□□□□ -2.15
TRAFD1O14545 MIR3198-2-201ENST00000577868 80 ntBASIC1.61□□□□□ -2.15
TRAFD1O14545 AC044792.1-201ENST00000593294 196 ntBASIC1.61□□□□□ -2.15
TRAFD1O14545 AC040896.1-201ENST00000613819 479 ntBASIC1.61□□□□□ -2.15
TRAFD1O14545 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.61□□□□□ -2.15
TRAFD1O14545 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.61□□□□□ -2.15
TRAFD1O14545 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.6□□□□□ -2.15
TRAFD1O14545 Y_RNA.27-201ENST00000362540 103 ntBASIC1.6□□□□□ -2.15
TRAFD1O14545 RNU6-454P-201ENST00000364292 107 ntBASIC1.6□□□□□ -2.15
TRAFD1O14545 Y_RNA.424-201ENST00000384063 103 ntBASIC1.6□□□□□ -2.15
TRAFD1O14545 MIR320A-201ENST00000385302 82 ntBASIC1.6□□□□□ -2.15
TRAFD1O14545 RNU6-482P-201ENST00000391068 107 ntBASIC1.6□□□□□ -2.15
TRAFD1O14545 MIR1253-201ENST00000408273 105 ntBASIC1.6□□□□□ -2.15
TRAFD1O14545 MTCO3P19-201ENST00000415864 321 ntBASIC1.6□□□□□ -2.15
TRAFD1O14545 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.6□□□□□ -2.15
TRAFD1O14545 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.6□□□□□ -2.15
TRAFD1O14545 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.6□□□□□ -2.15
TRAFD1O14545 FCF1P4-201ENST00000448326 183 ntBASIC1.6□□□□□ -2.15
TRAFD1O14545 RPL26P26-201ENST00000480251 434 ntBASIC1.6□□□□□ -2.15
TRAFD1O14545 AC008834.1-201ENST00000511612 175 ntBASIC1.6□□□□□ -2.15
TRAFD1O14545 SNORA25.10-201ENST00000515926 124 ntBASIC1.6□□□□□ -2.15
TRAFD1O14545 RNU6-397P-201ENST00000516226 104 ntBASIC1.6□□□□□ -2.15
TRAFD1O14545 RNU6-988P-201ENST00000519081 107 ntBASIC1.6□□□□□ -2.15
TRAFD1O14545 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
TRAFD1O14545 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.6□□□□□ -2.15
TRAFD1O14545 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.6□□□□□ -2.15
TRAFD1O14545 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.6□□□□□ -2.15
TRAFD1O14545 MIR4769-201ENST00000584126 77 ntBASIC1.6□□□□□ -2.15
TRAFD1O14545 RPS29P30-201ENST00000600975 111 ntBASIC1.6□□□□□ -2.15
TRAFD1O14545 AC016925.2-201ENST00000605108 242 ntBASIC1.6□□□□□ -2.15
TRAFD1O14545 AC103810.8-201ENST00000607347 118 ntBASIC1.6□□□□□ -2.15
TRAFD1O14545 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.6□□□□□ -2.15
TRAFD1O14545 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
TRAFD1O14545 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
TRAFD1O14545 RNU6-626P-201ENST00000363354 107 ntBASIC1.59□□□□□ -2.15
TRAFD1O14545 RNU1-96P-201ENST00000364163 162 ntBASIC1.59□□□□□ -2.15
TRAFD1O14545 SNORD14.1-201ENST00000365609 90 ntBASIC1.59□□□□□ -2.15
TRAFD1O14545 RNU6-1264P-201ENST00000383891 107 ntBASIC1.59□□□□□ -2.15
TRAFD1O14545 RNU6-20P-201ENST00000384106 107 ntBASIC1.59□□□□□ -2.15
TRAFD1O14545 Y_RNA.527-201ENST00000384573 102 ntBASIC1.59□□□□□ -2.15
TRAFD1O14545 SNORA67.5-201ENST00000391036 107 ntBASIC1.59□□□□□ -2.15
TRAFD1O14545 RNA5SP467-201ENST00000391274 118 ntBASIC1.59□□□□□ -2.15
TRAFD1O14545 RNA5SP475-201ENST00000410568 110 ntBASIC1.59□□□□□ -2.15
TRAFD1O14545 AC074133.1-201ENST00000515696 183 ntBASIC1.59□□□□□ -2.15
TRAFD1O14545 RNU6-911P-201ENST00000516523 104 ntBASIC1.59□□□□□ -2.15
TRAFD1O14545 RNU2-34P-201ENST00000516534 121 ntBASIC1.59□□□□□ -2.15
TRAFD1O14545 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.59□□□□□ -2.15
TRAFD1O14545 AC104695.3-201ENST00000604052 296 ntBASIC1.59□□□□□ -2.15
TRAFD1O14545 AC124312.5-201ENST00000604451 268 ntBASIC1.59□□□□□ -2.15
TRAFD1O14545 AL021879.1-201ENST00000611756 288 ntBASIC1.59□□□□□ -2.15
TRAFD1O14545 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.59□□□□□ -2.15
TRAFD1O14545 AC004467.1-201ENST00000615678 330 ntBASIC1.59□□□□□ -2.15
TRAFD1O14545 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.59□□□□□ -2.15
TRAFD1O14545 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.59□□□□□ -2.15
TRAFD1O14545 MIR3674-201ENST00000636576 68 ntBASIC1.59□□□□□ -2.15
TRAFD1O14545 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.59□□□□□ -2.16
TRAFD1O14545 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
TRAFD1O14545 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
TRAFD1O14545 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
TRAFD1O14545 RNU6-457P-201ENST00000363999 107 ntBASIC1.58□□□□□ -2.16
TRAFD1O14545 Y_RNA.287-201ENST00000364853 94 ntBASIC1.58□□□□□ -2.16
TRAFD1O14545 SNORA72.2-201ENST00000365028 127 ntBASIC1.58□□□□□ -2.16
TRAFD1O14545 RNU6-1240P-201ENST00000365155 104 ntBASIC1.58□□□□□ -2.16
TRAFD1O14545 Y_RNA.389-201ENST00000383924 113 ntBASIC1.58□□□□□ -2.16
TRAFD1O14545 Y_RNA.471-201ENST00000384312 102 ntBASIC1.58□□□□□ -2.16
TRAFD1O14545 MRPL42P3-201ENST00000401492 326 ntBASIC1.58□□□□□ -2.16
TRAFD1O14545 TOMM22P2-201ENST00000430735 237 ntBASIC1.58□□□□□ -2.16
TRAFD1O14545 AC005534.2-201ENST00000431047 433 ntBASIC1.58□□□□□ -2.16
TRAFD1O14545 AC112492.4-201ENST00000456549 352 ntBASIC1.58□□□□□ -2.16
TRAFD1O14545 SNORD65B-201ENST00000459126 73 ntBASIC1.58□□□□□ -2.16
TRAFD1O14545 RNU6-966P-201ENST00000516479 104 ntBASIC1.58□□□□□ -2.16
TRAFD1O14545 SNORA40.14-201ENST00000516543 86 ntBASIC1.58□□□□□ -2.16
TRAFD1O14545 AC023157.2-201ENST00000540596 141 ntBASIC1.58□□□□□ -2.16
TRAFD1O14545 AC005786.1-201ENST00000588553 154 ntBASIC1.58□□□□□ -2.16
TRAFD1O14545 PART1_1.1-201ENST00000611761 217 ntBASIC1.58□□□□□ -2.16
TRAFD1O14545 MIR338-201ENST00000636369 67 ntBASIC1.58□□□□□ -2.16
TRAFD1O14545 AP000648.3-201ENST00000623539 4507 ntBASIC1.57□□□□□ -2.16
TRAFD1O14545 RNU6-1266P-201ENST00000362794 105 ntBASIC1.57□□□□□ -2.16
TRAFD1O14545 snoU2-30.2-201ENST00000362805 70 ntBASIC1.57□□□□□ -2.16
TRAFD1O14545 Y_RNA.101-201ENST00000363154 102 ntBASIC1.57□□□□□ -2.16
TRAFD1O14545 Y_RNA.143-201ENST00000363520 106 ntBASIC1.57□□□□□ -2.16
TRAFD1O14545 Y_RNA.458-201ENST00000384240 102 ntBASIC1.57□□□□□ -2.16
TRAFD1O14545 MIR934-201ENST00000401241 83 ntBASIC1.57□□□□□ -2.16
TRAFD1O14545 AL117342.1-201ENST00000404861 406 ntBASIC1.57□□□□□ -2.16
TRAFD1O14545 MIR1302-11-201ENST00000408051 138 ntBASIC1.57□□□□□ -2.16
TRAFD1O14545 MIR1302-9-201ENST00000408365 138 ntBASIC1.57□□□□□ -2.16
TRAFD1O14545 MIR1302-10-201ENST00000408734 138 ntBASIC1.57□□□□□ -2.16
TRAFD1O14545 RNU6-1186P-201ENST00000410429 97 ntBASIC1.57□□□□□ -2.16
TRAFD1O14545 RNU6-130P-201ENST00000411112 103 ntBASIC1.57□□□□□ -2.16
TRAFD1O14545 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.57□□□□□ -2.16
TRAFD1O14545 AC005002.2-201ENST00000438228 269 ntBASIC1.57□□□□□ -2.16
TRAFD1O14545 HSPE1P21-201ENST00000438283 308 ntBASIC1.57□□□□□ -2.16
TRAFD1O14545 MTCYBP6-201ENST00000441810 138 ntBASIC1.57□□□□□ -2.16
TRAFD1O14545 NDUFB4P10-201ENST00000452541 359 ntBASIC1.57□□□□□ -2.16
TRAFD1O14545 RNU6-237P-201ENST00000515985 71 ntBASIC1.57□□□□□ -2.16
TRAFD1O14545 SNORA44.1-201ENST00000517031 108 ntBASIC1.57□□□□□ -2.16
TRAFD1O14545 RNU6-1137P-201ENST00000517073 99 ntBASIC1.57□□□□□ -2.16
TRAFD1O14545 CYCSP23-201ENST00000519781 313 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 130.6 ms