Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC141273.2-201ENST00000618989 130 ntBASIC2.45□□□□□ -2.02
FOXN3O00409 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.45□□□□□ -2.02
FOXN3O00409 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
FOXN3O00409 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
FOXN3O00409 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
FOXN3O00409 RNU1-58P-201ENST00000362413 163 ntBASIC2.44□□□□□ -2.02
FOXN3O00409 SNORD81.1-201ENST00000363064 77 ntBASIC2.44□□□□□ -2.02
FOXN3O00409 Y_RNA.269-201ENST00000364685 89 ntBASIC2.44□□□□□ -2.02
FOXN3O00409 Y_RNA.331-201ENST00000365267 102 ntBASIC2.44□□□□□ -2.02
FOXN3O00409 RNU6-1310P-201ENST00000384153 107 ntBASIC2.44□□□□□ -2.02
FOXN3O00409 Y_RNA.570-201ENST00000384750 101 ntBASIC2.44□□□□□ -2.02
FOXN3O00409 MIR1253-201ENST00000408273 105 ntBASIC2.44□□□□□ -2.02
FOXN3O00409 MIR1185-2-201ENST00000408687 86 ntBASIC2.44□□□□□ -2.02
FOXN3O00409 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.44□□□□□ -2.02
FOXN3O00409 TOMM22P2-201ENST00000430735 237 ntBASIC2.44□□□□□ -2.02
FOXN3O00409 AL357134.1-201ENST00000445848 426 ntBASIC2.44□□□□□ -2.02
FOXN3O00409 RPS27P21-201ENST00000486977 252 ntBASIC2.44□□□□□ -2.02
FOXN3O00409 AC087441.2-201ENST00000529141 262 ntBASIC2.44□□□□□ -2.02
FOXN3O00409 AP002001.1-203ENST00000534002 267 ntBASIC2.44□□□□□ -2.02
FOXN3O00409 MIR3124-201ENST00000582636 67 ntBASIC2.44□□□□□ -2.02
FOXN3O00409 AC005176.2-201ENST00000596933 147 ntBASIC2.44□□□□□ -2.02
FOXN3O00409 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.44□□□□□ -2.02
FOXN3O00409 AC091932.3-201ENST00000624223 323 ntBASIC2.44□□□□□ -2.02
FOXN3O00409 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
FOXN3O00409 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.44□□□□□ -2.02
FOXN3O00409 MIR335-201ENST00000362173 94 ntBASIC2.43□□□□□ -2.02
FOXN3O00409 Y_RNA.230-201ENST00000364348 109 ntBASIC2.43□□□□□ -2.02
FOXN3O00409 SNORD63-201ENST00000384262 68 ntBASIC2.43□□□□□ -2.02
FOXN3O00409 SNORA80E-201ENST00000384744 137 ntBASIC2.43□□□□□ -2.02
FOXN3O00409 MIR17-201ENST00000385012 84 ntBASIC2.43□□□□□ -2.02
FOXN3O00409 U3.40-201ENST00000408706 208 ntBASIC2.43□□□□□ -2.02
FOXN3O00409 RNU2-14P-201ENST00000411053 191 ntBASIC2.43□□□□□ -2.02
FOXN3O00409 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.43□□□□□ -2.02
FOXN3O00409 HMGN2P34-201ENST00000437647 269 ntBASIC2.43□□□□□ -2.02
FOXN3O00409 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.43□□□□□ -2.02
FOXN3O00409 SERF1AP1-201ENST00000514575 187 ntBASIC2.43□□□□□ -2.02
FOXN3O00409 RNA5SP24-201ENST00000516478 95 ntBASIC2.43□□□□□ -2.02
FOXN3O00409 RNU2-34P-201ENST00000516534 121 ntBASIC2.43□□□□□ -2.02
FOXN3O00409 MIR3145-201ENST00000580727 82 ntBASIC2.43□□□□□ -2.02
FOXN3O00409 MIR4423-201ENST00000580922 80 ntBASIC2.43□□□□□ -2.02
FOXN3O00409 AC007229.1-201ENST00000590455 412 ntBASIC2.43□□□□□ -2.02
FOXN3O00409 U2.14-201ENST00000615943 113 ntBASIC2.43□□□□□ -2.02
FOXN3O00409 Y_RNA.20-201ENST00000362479 113 ntBASIC2.42□□□□□ -2.02
FOXN3O00409 Y_RNA.352-201ENST00000365439 102 ntBASIC2.42□□□□□ -2.02
FOXN3O00409 Y_RNA.446-201ENST00000384178 104 ntBASIC2.42□□□□□ -2.02
FOXN3O00409 RNU6-651P-201ENST00000411040 105 ntBASIC2.42□□□□□ -2.02
FOXN3O00409 AC060773.1-201ENST00000421698 310 ntBASIC2.42□□□□□ -2.02
FOXN3O00409 HMGN2P3-201ENST00000433603 273 ntBASIC2.42□□□□□ -2.02
FOXN3O00409 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.42□□□□□ -2.02
FOXN3O00409 HMGN2P5-201ENST00000436882 273 ntBASIC2.42□□□□□ -2.02
FOXN3O00409 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.42□□□□□ -2.02
FOXN3O00409 SEPT14P8-201ENST00000508026 178 ntBASIC2.42□□□□□ -2.02
FOXN3O00409 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
FOXN3O00409 RNA5SP281-201ENST00000516504 135 ntBASIC2.42□□□□□ -2.02
FOXN3O00409 RNU6-856P-201ENST00000516959 98 ntBASIC2.42□□□□□ -2.02
FOXN3O00409 SUMO2P18-201ENST00000518873 252 ntBASIC2.42□□□□□ -2.02
FOXN3O00409 AC130289.1-201ENST00000577321 73 ntBASIC2.42□□□□□ -2.02
FOXN3O00409 AC008749.1-201ENST00000597650 306 ntBASIC2.42□□□□□ -2.02
FOXN3O00409 SNORD113-5-201ENST00000607261 78 ntBASIC2.42□□□□□ -2.02
FOXN3O00409 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.42□□□□□ -2.02
FOXN3O00409 Y_RNA.101-201ENST00000363154 102 ntBASIC2.41□□□□□ -2.02
FOXN3O00409 Y_RNA.117-201ENST00000363294 101 ntBASIC2.41□□□□□ -2.02
FOXN3O00409 SNORA16B-201ENST00000364674 135 ntBASIC2.41□□□□□ -2.02
FOXN3O00409 Y_RNA.274-201ENST00000364714 101 ntBASIC2.41□□□□□ -2.02
FOXN3O00409 Y_RNA.418-201ENST00000384029 102 ntBASIC2.41□□□□□ -2.02
FOXN3O00409 Y_RNA.569-201ENST00000384749 103 ntBASIC2.41□□□□□ -2.02
FOXN3O00409 RNU5A-5P-201ENST00000411054 116 ntBASIC2.41□□□□□ -2.02
FOXN3O00409 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.41□□□□□ -2.02
FOXN3O00409 RNU6-221P-201ENST00000459541 99 ntBASIC2.41□□□□□ -2.02
FOXN3O00409 YWHAEP4-201ENST00000505390 198 ntBASIC2.41□□□□□ -2.02
FOXN3O00409 AC011406.1-201ENST00000512440 370 ntBASIC2.41□□□□□ -2.02
FOXN3O00409 SNORA31.25-201ENST00000517242 134 ntBASIC2.41□□□□□ -2.02
FOXN3O00409 AC025647.1-201ENST00000517879 253 ntBASIC2.41□□□□□ -2.02
FOXN3O00409 RPL21P9-201ENST00000556149 474 ntBASIC2.41□□□□□ -2.02
FOXN3O00409 ZNF720P1-201ENST00000562403 1939 ntBASIC2.4□□□□□ -2.02
FOXN3O00409 AC005336.3-201ENST00000623833 2679 ntBASIC2.4□□□□□ -2.02
FOXN3O00409 SNORA25.1-201ENST00000362326 128 ntBASIC2.4□□□□□ -2.03
FOXN3O00409 RNU4-82P-201ENST00000362443 140 ntBASIC2.4□□□□□ -2.03
FOXN3O00409 Y_RNA.478-201ENST00000384358 107 ntBASIC2.4□□□□□ -2.03
FOXN3O00409 SNORA40.19-201ENST00000390846 128 ntBASIC2.4□□□□□ -2.03
FOXN3O00409 SNORA53-201ENST00000391141 249 ntBASIC2.4□□□□□ -2.03
FOXN3O00409 AL390729.2-201ENST00000416137 156 ntBASIC2.4□□□□□ -2.03
FOXN3O00409 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.4□□□□□ -2.03
FOXN3O00409 AC008134.1-201ENST00000420943 193 ntBASIC2.4□□□□□ -2.03
FOXN3O00409 POLR2KP2-201ENST00000438155 177 ntBASIC2.4□□□□□ -2.03
FOXN3O00409 ATP5J2P3-201ENST00000451550 258 ntBASIC2.4□□□□□ -2.03
FOXN3O00409 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.4□□□□□ -2.03
FOXN3O00409 AC104435.1-201ENST00000483483 166 ntBASIC2.4□□□□□ -2.03
FOXN3O00409 RNU2-31P-201ENST00000516954 155 ntBASIC2.4□□□□□ -2.03
FOXN3O00409 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.4□□□□□ -2.03
FOXN3O00409 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.4□□□□□ -2.03
FOXN3O00409 MIR3169-201ENST00000578032 83 ntBASIC2.4□□□□□ -2.03
FOXN3O00409 MIR4529-201ENST00000578110 78 ntBASIC2.4□□□□□ -2.03
FOXN3O00409 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.39□□□□□ -2.03
FOXN3O00409 Y_RNA.44-201ENST00000362676 108 ntBASIC2.39□□□□□ -2.03
FOXN3O00409 Y_RNA.76-201ENST00000362931 109 ntBASIC2.39□□□□□ -2.03
FOXN3O00409 RNU6-454P-201ENST00000364292 107 ntBASIC2.39□□□□□ -2.03
FOXN3O00409 RNU6-1240P-201ENST00000365155 104 ntBASIC2.39□□□□□ -2.03
FOXN3O00409 Y_RNA.383-201ENST00000383855 97 ntBASIC2.39□□□□□ -2.03
FOXN3O00409 MIR221-201ENST00000385135 110 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 162.3 ms