Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.68□□□□□ -2.14
O00370 FCF1P4-201ENST00000448326 183 ntBASIC1.68□□□□□ -2.14
O00370 RNU6-970P-201ENST00000516312 107 ntBASIC1.68□□□□□ -2.14
O00370 Y_RNA.676-201ENST00000516393 96 ntBASIC1.68□□□□□ -2.14
O00370 AC023157.2-201ENST00000540596 141 ntBASIC1.68□□□□□ -2.14
O00370 AC138305.3-201ENST00000624988 240 ntBASIC1.68□□□□□ -2.14
O00370 MIR338-201ENST00000636369 67 ntBASIC1.68□□□□□ -2.14
O00370 U6.92-201ENST00000636464 89 ntBASIC1.68□□□□□ -2.14
O00370 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.68□□□□□ -2.14
O00370 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
O00370 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.68□□□□□ -2.14
O00370 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
O00370 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.68□□□□□ -2.14
O00370 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.67□□□□□ -2.14
O00370 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
O00370 Y_RNA.252-201ENST00000364556 101 ntBASIC1.67□□□□□ -2.14
O00370 RNY1P14-201ENST00000384426 108 ntBASIC1.67□□□□□ -2.14
O00370 RNU6-997P-201ENST00000384725 107 ntBASIC1.67□□□□□ -2.14
O00370 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
O00370 MTCO2P12-201ENST00000427426 682 ntBASIC1.67□□□□□ -2.14
O00370 RNU1-98P-201ENST00000458992 160 ntBASIC1.67□□□□□ -2.14
O00370 RPS27P22-201ENST00000478056 241 ntBASIC1.67□□□□□ -2.14
O00370 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.67□□□□□ -2.14
O00370 AC074133.1-201ENST00000515696 183 ntBASIC1.67□□□□□ -2.14
O00370 RNU4-77P-201ENST00000516692 156 ntBASIC1.67□□□□□ -2.14
O00370 CYCSP23-201ENST00000519781 313 ntBASIC1.67□□□□□ -2.14
O00370 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.67□□□□□ -2.14
O00370 MIR4659A-201ENST00000580269 81 ntBASIC1.67□□□□□ -2.14
O00370 AC010900.2-201ENST00000604508 210 ntBASIC1.67□□□□□ -2.14
O00370 MIR3674-201ENST00000636576 68 ntBASIC1.67□□□□□ -2.14
O00370 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.67□□□□□ -2.14
O00370 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.66□□□□□ -2.14
O00370 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
O00370 Y_RNA.31-201ENST00000362574 102 ntBASIC1.66□□□□□ -2.14
O00370 RNU6-961P-201ENST00000363893 105 ntBASIC1.66□□□□□ -2.14
O00370 Y_RNA.287-201ENST00000364853 94 ntBASIC1.66□□□□□ -2.14
O00370 RNU6-407P-201ENST00000365280 104 ntBASIC1.66□□□□□ -2.14
O00370 RNY3P4-201ENST00000384428 101 ntBASIC1.66□□□□□ -2.14
O00370 MIR1323-201ENST00000408090 73 ntBASIC1.66□□□□□ -2.14
O00370 MTCO3P19-201ENST00000415864 321 ntBASIC1.66□□□□□ -2.14
O00370 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.66□□□□□ -2.14
O00370 NDUFB4P10-201ENST00000452541 359 ntBASIC1.66□□□□□ -2.14
O00370 AC010469.2-201ENST00000496412 480 ntBASIC1.66□□□□□ -2.14
O00370 SNORA31.17-201ENST00000516953 127 ntBASIC1.66□□□□□ -2.14
O00370 RN7SKP295-201ENST00000517264 153 ntBASIC1.66□□□□□ -2.14
O00370 AP002001.1-203ENST00000534002 267 ntBASIC1.66□□□□□ -2.14
O00370 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.66□□□□□ -2.14
O00370 MIR5188-201ENST00000583467 113 ntBASIC1.66□□□□□ -2.14
O00370 RPS29P30-201ENST00000600975 111 ntBASIC1.66□□□□□ -2.14
O00370 MIR8074-201ENST00000615081 81 ntBASIC1.66□□□□□ -2.14
O00370 uc_338.22-201ENST00000622722 187 ntBASIC1.66□□□□□ -2.14
O00370 AL606534.2-204ENST00000635008 178 ntBASIC1.66□□□□□ -2.14
O00370 Y_RNA.138-201ENST00000363462 102 ntBASIC1.65□□□□□ -2.15
O00370 RNU6-457P-201ENST00000363999 107 ntBASIC1.65□□□□□ -2.15
O00370 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.65□□□□□ -2.15
O00370 AL117342.1-201ENST00000404861 406 ntBASIC1.65□□□□□ -2.15
O00370 CST2P1-201ENST00000425770 87 ntBASIC1.65□□□□□ -2.15
O00370 AC005002.2-201ENST00000438228 269 ntBASIC1.65□□□□□ -2.15
O00370 AC010409.1-201ENST00000487382 476 ntBASIC1.65□□□□□ -2.15
O00370 BX248123.2-201ENST00000606318 124 ntBASIC1.65□□□□□ -2.15
O00370 SNORD58B-201ENST00000607313 66 ntBASIC1.65□□□□□ -2.15
O00370 AP000648.3-201ENST00000623539 4507 ntBASIC1.65□□□□□ -2.15
O00370 AC091812.1-201ENST00000432235 1948 ntBASIC1.64□□□□□ -2.15
O00370 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
O00370 RNU6-661P-201ENST00000362409 107 ntBASIC1.64□□□□□ -2.15
O00370 Y_RNA.27-201ENST00000362540 103 ntBASIC1.64□□□□□ -2.15
O00370 Y_RNA.164-201ENST00000363709 102 ntBASIC1.64□□□□□ -2.15
O00370 MCFD2P1-201ENST00000417812 300 ntBASIC1.64□□□□□ -2.15
O00370 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.64□□□□□ -2.15
O00370 AC112492.4-201ENST00000456549 352 ntBASIC1.64□□□□□ -2.15
O00370 SNORD65B-201ENST00000459126 73 ntBASIC1.64□□□□□ -2.15
O00370 AC084364.2-201ENST00000546924 395 ntBASIC1.64□□□□□ -2.15
O00370 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.64□□□□□ -2.15
O00370 MIR4438-201ENST00000585271 93 ntBASIC1.64□□□□□ -2.15
O00370 AC022432.1-201ENST00000595739 310 ntBASIC1.64□□□□□ -2.15
O00370 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.64□□□□□ -2.15
O00370 AL353149.1-201ENST00000610667 244 ntBASIC1.64□□□□□ -2.15
O00370 AL138825.1-201ENST00000618587 192 ntBASIC1.64□□□□□ -2.15
O00370 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
O00370 AC010615.1-201ENST00000594254 1764 ntBASIC1.63□□□□□ -2.15
O00370 RNU1-115P-201ENST00000365329 160 ntBASIC1.63□□□□□ -2.15
O00370 SNORD42.2-201ENST00000365570 69 ntBASIC1.63□□□□□ -2.15
O00370 Y_RNA.424-201ENST00000384063 103 ntBASIC1.63□□□□□ -2.15
O00370 MIR320A-201ENST00000385302 82 ntBASIC1.63□□□□□ -2.15
O00370 AC018865.2-201ENST00000423631 129 ntBASIC1.63□□□□□ -2.15
O00370 AC245047.4-201ENST00000433189 144 ntBASIC1.63□□□□□ -2.15
O00370 AL137792.2-201ENST00000443484 235 ntBASIC1.63□□□□□ -2.15
O00370 AC005908.1-201ENST00000468701 347 ntBASIC1.63□□□□□ -2.15
O00370 RNU6-911P-201ENST00000516523 104 ntBASIC1.63□□□□□ -2.15
O00370 RNU1-142P-201ENST00000516682 145 ntBASIC1.63□□□□□ -2.15
O00370 AL137100.2-201ENST00000555786 315 ntBASIC1.63□□□□□ -2.15
O00370 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.63□□□□□ -2.15
O00370 AC055872.1-201ENST00000570978 278 ntBASIC1.63□□□□□ -2.15
O00370 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.63□□□□□ -2.15
O00370 AC005176.2-201ENST00000596933 147 ntBASIC1.63□□□□□ -2.15
O00370 AP001485.1-201ENST00000604799 199 ntBASIC1.63□□□□□ -2.15
O00370 AL359075.3-201ENST00000613288 217 ntBASIC1.63□□□□□ -2.15
O00370 AC004467.1-201ENST00000615678 330 ntBASIC1.63□□□□□ -2.15
O00370 AC240442.1-201ENST00000616055 283 ntBASIC1.63□□□□□ -2.15
O00370 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms