Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 RNU6-165P-201ENST00000517170 99 ntBASIC0.49□□□□□ -2.33
COL6A6A6NMZ7 SUMO2P18-201ENST00000518873 252 ntBASIC0.49□□□□□ -2.33
COL6A6A6NMZ7 SUMO2P16-201ENST00000519475 264 ntBASIC0.49□□□□□ -2.33
COL6A6A6NMZ7 AP003484.1-201ENST00000530974 250 ntBASIC0.49□□□□□ -2.33
COL6A6A6NMZ7 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.49□□□□□ -2.33
COL6A6A6NMZ7 AL121579.1-201ENST00000555129 305 ntBASIC0.49□□□□□ -2.33
COL6A6A6NMZ7 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.49□□□□□ -2.33
COL6A6A6NMZ7 SNORA59B-202ENST00000578183 701 ntBASIC0.49□□□□□ -2.33
COL6A6A6NMZ7 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.49□□□□□ -2.33
COL6A6A6NMZ7 AC124303.1-201ENST00000605703 360 ntBASIC0.49□□□□□ -2.33
COL6A6A6NMZ7 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
COL6A6A6NMZ7 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
COL6A6A6NMZ7 SNORD114-7-201ENST00000362520 77 ntBASIC0.49□□□□□ -2.33
COL6A6A6NMZ7 SNORA36A-201ENST00000384221 132 ntBASIC0.49□□□□□ -2.33
COL6A6A6NMZ7 RNU6-975P-201ENST00000384296 105 ntBASIC0.49□□□□□ -2.33
COL6A6A6NMZ7 MIR146A-201ENST00000385201 99 ntBASIC0.49□□□□□ -2.33
COL6A6A6NMZ7 RNA5SP504-201ENST00000410676 117 ntBASIC0.49□□□□□ -2.33
COL6A6A6NMZ7 USP9YP14-201ENST00000430663 563 ntBASIC0.49□□□□□ -2.33
COL6A6A6NMZ7 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.49□□□□□ -2.33
COL6A6A6NMZ7 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.49□□□□□ -2.33
COL6A6A6NMZ7 Y_RNA.706-201ENST00000516933 99 ntBASIC0.49□□□□□ -2.33
COL6A6A6NMZ7 CYP3A52P-201ENST00000563326 91 ntBASIC0.49□□□□□ -2.33
COL6A6A6NMZ7 MIR4273-201ENST00000582824 84 ntBASIC0.49□□□□□ -2.33
COL6A6A6NMZ7 AC010525.2-201ENST00000590920 195 ntBASIC0.49□□□□□ -2.33
COL6A6A6NMZ7 HSPE1P19-201ENST00000603327 295 ntBASIC0.49□□□□□ -2.33
COL6A6A6NMZ7 AC103591.3-201ENST00000608684 209 ntBASIC0.49□□□□□ -2.33
COL6A6A6NMZ7 MIR6128-201ENST00000615528 109 ntBASIC0.49□□□□□ -2.33
COL6A6A6NMZ7 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.49□□□□□ -2.33
COL6A6A6NMZ7 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.49□□□□□ -2.33
COL6A6A6NMZ7 MIR3662-201ENST00000637030 95 ntBASIC0.49□□□□□ -2.33
COL6A6A6NMZ7 HSBP1P2-201ENST00000299671 229 ntBASIC0.48□□□□□ -2.33
COL6A6A6NMZ7 RNU6-743P-201ENST00000364151 106 ntBASIC0.48□□□□□ -2.33
COL6A6A6NMZ7 Y_RNA.373-201ENST00000365600 103 ntBASIC0.48□□□□□ -2.33
COL6A6A6NMZ7 Y_RNA.404-201ENST00000383978 102 ntBASIC0.48□□□□□ -2.33
COL6A6A6NMZ7 RNU6-1119P-201ENST00000384349 108 ntBASIC0.48□□□□□ -2.33
COL6A6A6NMZ7 RNU6-417P-201ENST00000384712 107 ntBASIC0.48□□□□□ -2.33
COL6A6A6NMZ7 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
COL6A6A6NMZ7 AC009161.1-201ENST00000417306 376 ntBASIC0.48□□□□□ -2.33
COL6A6A6NMZ7 AL139396.1-201ENST00000421137 167 ntBASIC0.48□□□□□ -2.33
COL6A6A6NMZ7 EIF1P2-201ENST00000428233 350 ntBASIC0.48□□□□□ -2.33
COL6A6A6NMZ7 FGF7P6-202ENST00000451282 293 ntBASIC0.48□□□□□ -2.33
COL6A6A6NMZ7 MTCO3P8-201ENST00000453691 755 ntBASIC0.48□□□□□ -2.33
COL6A6A6NMZ7 AC112492.4-201ENST00000456549 352 ntBASIC0.48□□□□□ -2.33
COL6A6A6NMZ7 RPS26P55-201ENST00000471178 356 ntBASIC0.48□□□□□ -2.33
COL6A6A6NMZ7 SNORD116-28-201ENST00000516123 91 ntBASIC0.48□□□□□ -2.33
COL6A6A6NMZ7 RNU6-835P-201ENST00000516974 104 ntBASIC0.48□□□□□ -2.33
COL6A6A6NMZ7 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.48□□□□□ -2.33
COL6A6A6NMZ7 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
COL6A6A6NMZ7 MIR4802-201ENST00000581881 80 ntBASIC0.48□□□□□ -2.33
COL6A6A6NMZ7 AC133104.2-201ENST00000615272 193 ntBASIC0.48□□□□□ -2.33
COL6A6A6NMZ7 AC008163.1-202ENST00000636004 2889 ntBASIC0.48□□□□□ -2.33
COL6A6A6NMZ7 RNU6-842P-201ENST00000384269 107 ntBASIC0.48□□□□□ -2.33
COL6A6A6NMZ7 RNU6-790P-201ENST00000384479 105 ntBASIC0.48□□□□□ -2.33
COL6A6A6NMZ7 MIR586-201ENST00000385035 97 ntBASIC0.48□□□□□ -2.33
COL6A6A6NMZ7 RNU6-192P-201ENST00000391253 100 ntBASIC0.48□□□□□ -2.33
COL6A6A6NMZ7 Y_RNA.615-201ENST00000410769 117 ntBASIC0.48□□□□□ -2.33
COL6A6A6NMZ7 AL022718.1-201ENST00000412004 84 ntBASIC0.48□□□□□ -2.33
COL6A6A6NMZ7 AL161935.2-201ENST00000414627 60 ntBASIC0.48□□□□□ -2.33
COL6A6A6NMZ7 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.48□□□□□ -2.33
COL6A6A6NMZ7 AL606489.2-201ENST00000433886 234 ntBASIC0.48□□□□□ -2.33
COL6A6A6NMZ7 SUMO1P2-201ENST00000452524 304 ntBASIC0.48□□□□□ -2.33
COL6A6A6NMZ7 RNU6-221P-201ENST00000459541 99 ntBASIC0.48□□□□□ -2.33
COL6A6A6NMZ7 AC007215.1-201ENST00000464893 276 ntBASIC0.48□□□□□ -2.33
COL6A6A6NMZ7 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.48□□□□□ -2.33
COL6A6A6NMZ7 SNORA70.12-201ENST00000516084 153 ntBASIC0.48□□□□□ -2.33
COL6A6A6NMZ7 SNORA25.14-201ENST00000516481 132 ntBASIC0.48□□□□□ -2.33
COL6A6A6NMZ7 AL512310.8-201ENST00000550183 120 ntBASIC0.48□□□□□ -2.33
COL6A6A6NMZ7 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.48□□□□□ -2.33
COL6A6A6NMZ7 AC136932.1-201ENST00000574771 208 ntBASIC0.48□□□□□ -2.33
COL6A6A6NMZ7 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.48□□□□□ -2.33
COL6A6A6NMZ7 MIR4438-201ENST00000585271 93 ntBASIC0.48□□□□□ -2.33
COL6A6A6NMZ7 AP001485.1-201ENST00000604799 199 ntBASIC0.48□□□□□ -2.33
COL6A6A6NMZ7 AC100812.1-201ENST00000607622 580 ntBASIC0.48□□□□□ -2.33
COL6A6A6NMZ7 AF250324.2-201ENST00000608299 610 ntBASIC0.48□□□□□ -2.33
COL6A6A6NMZ7 uc_338.22-201ENST00000622722 187 ntBASIC0.48□□□□□ -2.33
COL6A6A6NMZ7 U6.108-201ENST00000637764 58 ntBASIC0.48□□□□□ -2.33
COL6A6A6NMZ7 AC073869.6-201ENST00000640656 341 ntBASIC0.48□□□□□ -2.33
COL6A6A6NMZ7 SNORA27.1-201ENST00000362604 124 ntBASIC0.47□□□□□ -2.33
COL6A6A6NMZ7 RNU6-1188P-201ENST00000363795 107 ntBASIC0.47□□□□□ -2.33
COL6A6A6NMZ7 RNU1-124P-201ENST00000363861 145 ntBASIC0.47□□□□□ -2.33
COL6A6A6NMZ7 SNORA4.2-201ENST00000365313 147 ntBASIC0.47□□□□□ -2.33
COL6A6A6NMZ7 SNORA32.2-201ENST00000384049 122 ntBASIC0.47□□□□□ -2.33
COL6A6A6NMZ7 RNA5SP494-201ENST00000410653 129 ntBASIC0.47□□□□□ -2.33
COL6A6A6NMZ7 RNU2-16P-201ENST00000410712 136 ntBASIC0.47□□□□□ -2.33
COL6A6A6NMZ7 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.47□□□□□ -2.33
COL6A6A6NMZ7 RAB28P5-201ENST00000427490 651 ntBASIC0.47□□□□□ -2.33
COL6A6A6NMZ7 PCNPP5-201ENST00000452246 481 ntBASIC0.47□□□□□ -2.33
COL6A6A6NMZ7 MTND1P11-201ENST00000456661 876 ntBASIC0.47□□□□□ -2.33
COL6A6A6NMZ7 SNORD65B-201ENST00000459126 73 ntBASIC0.47□□□□□ -2.33
COL6A6A6NMZ7 RPL39P28-201ENST00000465655 155 ntBASIC0.47□□□□□ -2.33
COL6A6A6NMZ7 AC097473.1-201ENST00000508142 408 ntBASIC0.47□□□□□ -2.33
COL6A6A6NMZ7 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.47□□□□□ -2.33
COL6A6A6NMZ7 SNORA31.4-201ENST00000516049 129 ntBASIC0.47□□□□□ -2.33
COL6A6A6NMZ7 RNU6-273P-201ENST00000516937 96 ntBASIC0.47□□□□□ -2.33
COL6A6A6NMZ7 RNU6-856P-201ENST00000516959 98 ntBASIC0.47□□□□□ -2.33
COL6A6A6NMZ7 MIR2355-201ENST00000517199 87 ntBASIC0.47□□□□□ -2.33
COL6A6A6NMZ7 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.47□□□□□ -2.33
COL6A6A6NMZ7 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.47□□□□□ -2.33
COL6A6A6NMZ7 MIR4709-201ENST00000577272 72 ntBASIC0.47□□□□□ -2.33
COL6A6A6NMZ7 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms