Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4□□□□□ -1.77
RCCD1A6NED2 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RCCD1A6NED2 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RCCD1A6NED2 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RCCD1A6NED2 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RCCD1A6NED2 RNU6-1084P-201ENST00000362498 107 ntBASIC3.99□□□□□ -1.77
RCCD1A6NED2 Y_RNA.454-201ENST00000384224 113 ntBASIC3.99□□□□□ -1.77
RCCD1A6NED2 MIR95-201ENST00000385072 81 ntBASIC3.99□□□□□ -1.77
RCCD1A6NED2 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.99□□□□□ -1.77
RCCD1A6NED2 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC3.99□□□□□ -1.77
RCCD1A6NED2 RNU6-1041P-201ENST00000516254 102 ntBASIC3.99□□□□□ -1.77
RCCD1A6NED2 SNORD36C-201ENST00000516733 66 ntBASIC3.99□□□□□ -1.77
RCCD1A6NED2 MIR3199-1-201ENST00000582434 88 ntBASIC3.99□□□□□ -1.77
RCCD1A6NED2 ZYXP1-201ENST00000617638 118 ntBASIC3.99□□□□□ -1.77
RCCD1A6NED2 MIR338-201ENST00000636369 67 ntBASIC3.99□□□□□ -1.77
RCCD1A6NED2 U6.108-201ENST00000637764 58 ntBASIC3.99□□□□□ -1.77
RCCD1A6NED2 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
RCCD1A6NED2 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.99□□□□□ -1.77
RCCD1A6NED2 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RCCD1A6NED2 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
RCCD1A6NED2 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.99□□□□□ -1.77
RCCD1A6NED2 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
RCCD1A6NED2 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.98□□□□□ -1.77
RCCD1A6NED2 SNORD68-201ENST00000363214 84 ntBASIC3.98□□□□□ -1.77
RCCD1A6NED2 RNU6-268P-201ENST00000364174 107 ntBASIC3.98□□□□□ -1.77
RCCD1A6NED2 Y_RNA.351-201ENST00000365436 96 ntBASIC3.98□□□□□ -1.77
RCCD1A6NED2 MIR1193-201ENST00000408109 78 ntBASIC3.98□□□□□ -1.77
RCCD1A6NED2 Y_RNA.601-201ENST00000410500 113 ntBASIC3.98□□□□□ -1.77
RCCD1A6NED2 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.98□□□□□ -1.77
RCCD1A6NED2 RNU7-6P-201ENST00000516845 62 ntBASIC3.98□□□□□ -1.77
RCCD1A6NED2 SNORA18.7-201ENST00000516910 131 ntBASIC3.98□□□□□ -1.77
RCCD1A6NED2 AC008011.1-201ENST00000545989 227 ntBASIC3.98□□□□□ -1.77
RCCD1A6NED2 MIR3160-1-201ENST00000577972 85 ntBASIC3.98□□□□□ -1.77
RCCD1A6NED2 MIR4762-201ENST00000585261 75 ntBASIC3.98□□□□□ -1.77
RCCD1A6NED2 AL353149.1-201ENST00000610667 244 ntBASIC3.98□□□□□ -1.77
RCCD1A6NED2 MIR492-201ENST00000638676 116 ntBASIC3.98□□□□□ -1.77
RCCD1A6NED2 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
RCCD1A6NED2 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RCCD1A6NED2 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.98□□□□□ -1.77
RCCD1A6NED2 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RCCD1A6NED2 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RCCD1A6NED2 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RCCD1A6NED2 Y_RNA.10-201ENST00000362371 110 ntBASIC3.97□□□□□ -1.77
RCCD1A6NED2 RNA5SP42-201ENST00000364278 115 ntBASIC3.97□□□□□ -1.77
RCCD1A6NED2 RNA5SP323-201ENST00000391094 133 ntBASIC3.97□□□□□ -1.77
RCCD1A6NED2 RNU6-1328P-201ENST00000410938 106 ntBASIC3.97□□□□□ -1.77
RCCD1A6NED2 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.97□□□□□ -1.77
RCCD1A6NED2 RNU6-711P-201ENST00000517255 106 ntBASIC3.97□□□□□ -1.77
RCCD1A6NED2 U7.8-201ENST00000619968 63 ntBASIC3.97□□□□□ -1.77
RCCD1A6NED2 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
RCCD1A6NED2 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
RCCD1A6NED2 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.96□□□□□ -1.77
RCCD1A6NED2 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
RCCD1A6NED2 Y_RNA.17-201ENST00000362433 111 ntBASIC3.96□□□□□ -1.78
RCCD1A6NED2 RNU1-23P-201ENST00000363361 144 ntBASIC3.96□□□□□ -1.78
RCCD1A6NED2 RNA5SP479-201ENST00000364858 117 ntBASIC3.96□□□□□ -1.78
RCCD1A6NED2 snoU2-30.1-201ENST00000365012 70 ntBASIC3.96□□□□□ -1.78
RCCD1A6NED2 Y_RNA.593-201ENST00000410292 98 ntBASIC3.96□□□□□ -1.78
RCCD1A6NED2 SNRPGP14-201ENST00000435400 219 ntBASIC3.96□□□□□ -1.78
RCCD1A6NED2 AC107083.1-201ENST00000439643 279 ntBASIC3.96□□□□□ -1.78
RCCD1A6NED2 AC087499.4-201ENST00000448505 178 ntBASIC3.96□□□□□ -1.78
RCCD1A6NED2 SNORA48.11-201ENST00000517015 89 ntBASIC3.96□□□□□ -1.78
RCCD1A6NED2 AP003484.1-201ENST00000530974 250 ntBASIC3.96□□□□□ -1.78
RCCD1A6NED2 FAM71BP1-201ENST00000604431 523 ntBASIC3.96□□□□□ -1.78
RCCD1A6NED2 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.96□□□□□ -1.78
RCCD1A6NED2 MIR7515-201ENST00000637837 67 ntBASIC3.96□□□□□ -1.78
RCCD1A6NED2 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.96□□□□□ -1.78
RCCD1A6NED2 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
RCCD1A6NED2 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
RCCD1A6NED2 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
RCCD1A6NED2 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RCCD1A6NED2 OTUD4P1-201ENST00000237841 3067 ntBASIC3.95□□□□□ -1.78
RCCD1A6NED2 FAM35CP-201ENST00000554755 2470 ntBASIC3.95□□□□□ -1.78
RCCD1A6NED2 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.95□□□□□ -1.78
RCCD1A6NED2 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
RCCD1A6NED2 U8.5-201ENST00000364528 136 ntBASIC3.95□□□□□ -1.78
RCCD1A6NED2 Y_RNA.507-201ENST00000384500 99 ntBASIC3.95□□□□□ -1.78
RCCD1A6NED2 SNORA57.1-201ENST00000391227 145 ntBASIC3.95□□□□□ -1.78
RCCD1A6NED2 RNA5SP317-201ENST00000410176 116 ntBASIC3.95□□□□□ -1.78
RCCD1A6NED2 RNU6-938P-201ENST00000411285 103 ntBASIC3.95□□□□□ -1.78
RCCD1A6NED2 RNA5SP311-201ENST00000411290 116 ntBASIC3.95□□□□□ -1.78
RCCD1A6NED2 CYCSP35-201ENST00000451978 304 ntBASIC3.95□□□□□ -1.78
RCCD1A6NED2 RPL23AP67-201ENST00000465341 474 ntBASIC3.95□□□□□ -1.78
RCCD1A6NED2 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.95□□□□□ -1.78
RCCD1A6NED2 RNA5SP315-201ENST00000516340 116 ntBASIC3.95□□□□□ -1.78
RCCD1A6NED2 RNU2-35P-201ENST00000516446 142 ntBASIC3.95□□□□□ -1.78
RCCD1A6NED2 RNA5SP312-201ENST00000517068 116 ntBASIC3.95□□□□□ -1.78
RCCD1A6NED2 TNPO1P3-201ENST00000436471 2662 ntBASIC3.95□□□□□ -1.78
RCCD1A6NED2 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RCCD1A6NED2 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RCCD1A6NED2 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
RCCD1A6NED2 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RCCD1A6NED2 RNU6-1099P-201ENST00000363533 107 ntBASIC3.94□□□□□ -1.78
RCCD1A6NED2 Y_RNA.336-201ENST00000365307 109 ntBASIC3.94□□□□□ -1.78
RCCD1A6NED2 MIR515-2-201ENST00000384883 83 ntBASIC3.94□□□□□ -1.78
RCCD1A6NED2 MIR515-1-201ENST00000384884 83 ntBASIC3.94□□□□□ -1.78
RCCD1A6NED2 RNA5SP424-201ENST00000390988 115 ntBASIC3.94□□□□□ -1.78
RCCD1A6NED2 RPL21P3-201ENST00000395517 478 ntBASIC3.94□□□□□ -1.78
RCCD1A6NED2 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.94□□□□□ -1.78
RCCD1A6NED2 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms