Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 MRPL42P2-201ENST00000403169 426 ntBASIC-0.57□□□□□ -2.5
TCRBV3S1A0A5B6 RNA5SP127-201ENST00000411051 133 ntBASIC-0.57□□□□□ -2.5
TCRBV3S1A0A5B6 AL390729.2-201ENST00000416137 156 ntBASIC-0.57□□□□□ -2.5
TCRBV3S1A0A5B6 AC096531.1-201ENST00000419107 107 ntBASIC-0.57□□□□□ -2.5
TCRBV3S1A0A5B6 MTND3P9-201ENST00000429526 346 ntBASIC-0.57□□□□□ -2.5
TCRBV3S1A0A5B6 MTND4LP16-201ENST00000440828 295 ntBASIC-0.57□□□□□ -2.5
TCRBV3S1A0A5B6 MTND4P18-201ENST00000447010 465 ntBASIC-0.57□□□□□ -2.5
TCRBV3S1A0A5B6 EPS15P1-201ENST00000448836 336 ntBASIC-0.57□□□□□ -2.5
TCRBV3S1A0A5B6 AC079140.5-201ENST00000507882 310 ntBASIC-0.57□□□□□ -2.5
TCRBV3S1A0A5B6 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.57□□□□□ -2.5
TCRBV3S1A0A5B6 RN7SKP287-201ENST00000516546 266 ntBASIC-0.57□□□□□ -2.5
TCRBV3S1A0A5B6 AC090572.1-201ENST00000519251 160 ntBASIC-0.57□□□□□ -2.5
TCRBV3S1A0A5B6 AL158211.1-201ENST00000566763 763 ntBASIC-0.57□□□□□ -2.5
TCRBV3S1A0A5B6 AC100830.2-201ENST00000581636 240 ntBASIC-0.57□□□□□ -2.5
TCRBV3S1A0A5B6 RNU6-1192P-201ENST00000612197 107 ntBASIC-0.57□□□□□ -2.5
TCRBV3S1A0A5B6 RNU6-489P-201ENST00000618289 107 ntBASIC-0.57□□□□□ -2.5
TCRBV3S1A0A5B6 AC067863.3-201ENST00000624172 122 ntBASIC-0.57□□□□□ -2.5
TCRBV3S1A0A5B6 AC010608.3-201ENST00000625048 527 ntBASIC-0.57□□□□□ -2.5
TCRBV3S1A0A5B6 SNORD68-201ENST00000363214 84 ntBASIC-0.58□□□□□ -2.5
TCRBV3S1A0A5B6 SNORA72.1-201ENST00000363485 129 ntBASIC-0.58□□□□□ -2.5
TCRBV3S1A0A5B6 U8.5-201ENST00000364528 136 ntBASIC-0.58□□□□□ -2.5
TCRBV3S1A0A5B6 SNORA20B-201ENST00000384220 132 ntBASIC-0.58□□□□□ -2.5
TCRBV3S1A0A5B6 SNORD28B-201ENST00000390993 75 ntBASIC-0.58□□□□□ -2.5
TCRBV3S1A0A5B6 RNU2-54P-201ENST00000410299 190 ntBASIC-0.58□□□□□ -2.5
TCRBV3S1A0A5B6 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC-0.58□□□□□ -2.5
TCRBV3S1A0A5B6 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC-0.58□□□□□ -2.5
TCRBV3S1A0A5B6 RNU7-102P-201ENST00000458948 62 ntBASIC-0.58□□□□□ -2.5
TCRBV3S1A0A5B6 RNU6-1037P-201ENST00000459571 107 ntBASIC-0.58□□□□□ -2.5
TCRBV3S1A0A5B6 TRBVB-201ENST00000477100 408 ntBASIC-0.58□□□□□ -2.5
TCRBV3S1A0A5B6 MIR548AR-201ENST00000582191 57 ntBASIC-0.58□□□□□ -2.5
TCRBV3S1A0A5B6 MIR4762-201ENST00000585261 75 ntBASIC-0.58□□□□□ -2.5
TCRBV3S1A0A5B6 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC-0.58□□□□□ -2.5
TCRBV3S1A0A5B6 AF250324.2-201ENST00000608299 610 ntBASIC-0.58□□□□□ -2.5
TCRBV3S1A0A5B6 AC006157.1-201ENST00000611750 366 ntBASIC-0.58□□□□□ -2.5
TCRBV3S1A0A5B6 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-0.58□□□□□ -2.5
TCRBV3S1A0A5B6 AC121333.1-201ENST00000567488 2709 ntBASIC-0.58□□□□□ -2.5
TCRBV3S1A0A5B6 RNA5SP117-201ENST00000365294 118 ntBASIC-0.59□□□□□ -2.5
TCRBV3S1A0A5B6 SNORD73A-201ENST00000386062 65 ntBASIC-0.59□□□□□ -2.5
TCRBV3S1A0A5B6 MLLT10P1-201ENST00000418346 262 ntBASIC-0.59□□□□□ -2.5
TCRBV3S1A0A5B6 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC-0.59□□□□□ -2.5
TCRBV3S1A0A5B6 MTCO2P11-201ENST00000431069 680 ntBASIC-0.59□□□□□ -2.5
TCRBV3S1A0A5B6 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC-0.59□□□□□ -2.5
TCRBV3S1A0A5B6 RNU6-276P-201ENST00000516114 96 ntBASIC-0.59□□□□□ -2.5
TCRBV3S1A0A5B6 Y_RNA.670-201ENST00000516255 105 ntBASIC-0.59□□□□□ -2.5
TCRBV3S1A0A5B6 AC069113.1-201ENST00000517763 267 ntBASIC-0.59□□□□□ -2.5
TCRBV3S1A0A5B6 AL359999.1-201ENST00000604513 294 ntBASIC-0.59□□□□□ -2.5
TCRBV3S1A0A5B6 AC011921.3-201ENST00000605540 361 ntBASIC-0.59□□□□□ -2.5
TCRBV3S1A0A5B6 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-0.59□□□□□ -2.5
TCRBV3S1A0A5B6 SNORD114-31-201ENST00000363219 75 ntBASIC-0.6□□□□□ -2.51
TCRBV3S1A0A5B6 Y_RNA.123-201ENST00000363338 102 ntBASIC-0.6□□□□□ -2.51
TCRBV3S1A0A5B6 RNU6-931P-201ENST00000363850 107 ntBASIC-0.6□□□□□ -2.51
TCRBV3S1A0A5B6 SNORD115-8-201ENST00000363856 82 ntBASIC-0.6□□□□□ -2.51
TCRBV3S1A0A5B6 SNORD115-38-201ENST00000365037 82 ntBASIC-0.6□□□□□ -2.51
TCRBV3S1A0A5B6 SNORA20.2-201ENST00000383922 131 ntBASIC-0.6□□□□□ -2.51
TCRBV3S1A0A5B6 RNU6-376P-201ENST00000384731 106 ntBASIC-0.6□□□□□ -2.51
TCRBV3S1A0A5B6 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.6□□□□□ -2.51
TCRBV3S1A0A5B6 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC-0.6□□□□□ -2.51
TCRBV3S1A0A5B6 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.6□□□□□ -2.51
TCRBV3S1A0A5B6 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-0.6□□□□□ -2.51
TCRBV3S1A0A5B6 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC-0.6□□□□□ -2.51
TCRBV3S1A0A5B6 RPL39P34-201ENST00000477141 156 ntBASIC-0.6□□□□□ -2.51
TCRBV3S1A0A5B6 AC091885.1-201ENST00000506658 268 ntBASIC-0.6□□□□□ -2.51
TCRBV3S1A0A5B6 Y_RNA.676-201ENST00000516393 96 ntBASIC-0.6□□□□□ -2.51
TCRBV3S1A0A5B6 IGLVI-20-201ENST00000519296 130 ntBASIC-0.6□□□□□ -2.51
TCRBV3S1A0A5B6 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-0.6□□□□□ -2.51
TCRBV3S1A0A5B6 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.6□□□□□ -2.51
TCRBV3S1A0A5B6 AC005771.1-201ENST00000585581 349 ntBASIC-0.6□□□□□ -2.51
TCRBV3S1A0A5B6 MIR8064-201ENST00000612863 90 ntBASIC-0.6□□□□□ -2.51
TCRBV3S1A0A5B6 SNORD38B-202ENST00000625943 69 ntBASIC-0.6□□□□□ -2.51
TCRBV3S1A0A5B6 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-0.61□□□□□ -2.51
TCRBV3S1A0A5B6 RNU6-727P-201ENST00000363592 107 ntBASIC-0.61□□□□□ -2.51
TCRBV3S1A0A5B6 RNU6-660P-201ENST00000364566 109 ntBASIC-0.61□□□□□ -2.51
TCRBV3S1A0A5B6 RNU4-9P-201ENST00000364951 139 ntBASIC-0.61□□□□□ -2.51
TCRBV3S1A0A5B6 SNORD14C-201ENST00000365382 88 ntBASIC-0.61□□□□□ -2.51
TCRBV3S1A0A5B6 RNU6-117P-201ENST00000365415 107 ntBASIC-0.61□□□□□ -2.51
TCRBV3S1A0A5B6 Y_RNA.370-201ENST00000365589 108 ntBASIC-0.61□□□□□ -2.51
TCRBV3S1A0A5B6 Y_RNA.399-201ENST00000383955 105 ntBASIC-0.61□□□□□ -2.51
TCRBV3S1A0A5B6 RNU6-125P-201ENST00000384505 107 ntBASIC-0.61□□□□□ -2.51
TCRBV3S1A0A5B6 MIR802-201ENST00000390235 94 ntBASIC-0.61□□□□□ -2.51
TCRBV3S1A0A5B6 RNA5SP300-201ENST00000391197 107 ntBASIC-0.61□□□□□ -2.51
TCRBV3S1A0A5B6 AC018865.2-201ENST00000423631 129 ntBASIC-0.61□□□□□ -2.51
TCRBV3S1A0A5B6 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.61□□□□□ -2.51
TCRBV3S1A0A5B6 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-0.61□□□□□ -2.51
TCRBV3S1A0A5B6 RPL23AP75-201ENST00000491601 451 ntBASIC-0.61□□□□□ -2.51
TCRBV3S1A0A5B6 AC016550.1-201ENST00000505348 785 ntBASIC-0.61□□□□□ -2.51
TCRBV3S1A0A5B6 RNA5SP20-201ENST00000515976 84 ntBASIC-0.61□□□□□ -2.51
TCRBV3S1A0A5B6 SNORA14.1-201ENST00000516113 141 ntBASIC-0.61□□□□□ -2.51
TCRBV3S1A0A5B6 RNA5SP54-201ENST00000516951 92 ntBASIC-0.61□□□□□ -2.51
TCRBV3S1A0A5B6 MTND1P35-201ENST00000526739 508 ntBASIC-0.61□□□□□ -2.51
TCRBV3S1A0A5B6 AC026371.1-201ENST00000551867 419 ntBASIC-0.61□□□□□ -2.51
TCRBV3S1A0A5B6 MIR4645-201ENST00000583158 77 ntBASIC-0.61□□□□□ -2.51
TCRBV3S1A0A5B6 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.61□□□□□ -2.51
TCRBV3S1A0A5B6 AL591926.4-201ENST00000616895 298 ntBASIC-0.61□□□□□ -2.51
TCRBV3S1A0A5B6 MIR6828-201ENST00000636181 60 ntBASIC-0.61□□□□□ -2.51
TCRBV3S1A0A5B6 AC013437.2-201ENST00000639587 677 ntBASIC-0.61□□□□□ -2.51
TCRBV3S1A0A5B6 MTND4P12-201ENST00000498999 1377 ntBASIC-0.61□□□□□ -2.51
TCRBV3S1A0A5B6 SNORD114-28-201ENST00000363610 72 ntBASIC-0.62□□□□□ -2.51
TCRBV3S1A0A5B6 RNY1P12-201ENST00000364251 105 ntBASIC-0.62□□□□□ -2.51
TCRBV3S1A0A5B6 RNU6-923P-201ENST00000364753 107 ntBASIC-0.62□□□□□ -2.51
TCRBV3S1A0A5B6 RNU6-1029P-201ENST00000384109 107 ntBASIC-0.62□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms