Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 SNORD127-201ENST00000458892 86 ntBASIC2.1□□□□□ -2.07
TCRBV7S3A2A0A539 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
TCRBV7S3A2A0A539 SNORA70.12-201ENST00000516084 153 ntBASIC2.1□□□□□ -2.07
TCRBV7S3A2A0A539 RNU2-31P-201ENST00000516954 155 ntBASIC2.1□□□□□ -2.07
TCRBV7S3A2A0A539 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.1□□□□□ -2.07
TCRBV7S3A2A0A539 AC023157.2-201ENST00000540596 141 ntBASIC2.1□□□□□ -2.07
TCRBV7S3A2A0A539 AC245884.12-201ENST00000615364 59 ntBASIC2.1□□□□□ -2.07
TCRBV7S3A2A0A539 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.1□□□□□ -2.07
TCRBV7S3A2A0A539 Y_RNA.16-201ENST00000362421 102 ntBASIC2.09□□□□□ -2.07
TCRBV7S3A2A0A539 snoU2-30.2-201ENST00000362805 70 ntBASIC2.09□□□□□ -2.07
TCRBV7S3A2A0A539 RNU6-23P-201ENST00000363283 107 ntBASIC2.09□□□□□ -2.07
TCRBV7S3A2A0A539 Y_RNA.237-201ENST00000364439 102 ntBASIC2.09□□□□□ -2.07
TCRBV7S3A2A0A539 Y_RNA.287-201ENST00000364853 94 ntBASIC2.09□□□□□ -2.07
TCRBV7S3A2A0A539 RNA5SP37-201ENST00000365420 130 ntBASIC2.09□□□□□ -2.07
TCRBV7S3A2A0A539 SNORA67.3-201ENST00000384366 140 ntBASIC2.09□□□□□ -2.07
TCRBV7S3A2A0A539 Y_RNA.562-201ENST00000384695 113 ntBASIC2.09□□□□□ -2.07
TCRBV7S3A2A0A539 SNORA53-201ENST00000391141 249 ntBASIC2.09□□□□□ -2.07
TCRBV7S3A2A0A539 RNA5SP465-201ENST00000391195 109 ntBASIC2.09□□□□□ -2.07
TCRBV7S3A2A0A539 SNORA11.4-201ENST00000408823 129 ntBASIC2.09□□□□□ -2.07
TCRBV7S3A2A0A539 RNA5SP270-201ENST00000411361 118 ntBASIC2.09□□□□□ -2.07
TCRBV7S3A2A0A539 BX510359.4-201ENST00000423750 193 ntBASIC2.09□□□□□ -2.07
TCRBV7S3A2A0A539 HMGN2P34-201ENST00000437647 269 ntBASIC2.09□□□□□ -2.07
TCRBV7S3A2A0A539 ATP5J2P3-201ENST00000451550 258 ntBASIC2.09□□□□□ -2.07
TCRBV7S3A2A0A539 SERF1AP1-201ENST00000514575 187 ntBASIC2.09□□□□□ -2.07
TCRBV7S3A2A0A539 SNORA31.25-201ENST00000517242 134 ntBASIC2.09□□□□□ -2.07
TCRBV7S3A2A0A539 IGKV3-31-201ENST00000523109 329 ntBASIC2.09□□□□□ -2.07
TCRBV7S3A2A0A539 AC002984.1-201ENST00000591692 448 ntBASIC2.09□□□□□ -2.07
TCRBV7S3A2A0A539 SNRPGP19-201ENST00000603826 189 ntBASIC2.09□□□□□ -2.07
TCRBV7S3A2A0A539 AC062037.2-201ENST00000610137 73 ntBASIC2.09□□□□□ -2.07
TCRBV7S3A2A0A539 MIR338-201ENST00000636369 67 ntBASIC2.09□□□□□ -2.07
TCRBV7S3A2A0A539 CENPCP1-201ENST00000533085 2578 ntBASIC2.09□□□□□ -2.07
TCRBV7S3A2A0A539 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
TCRBV7S3A2A0A539 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.08□□□□□ -2.08
TCRBV7S3A2A0A539 AL391987.6-201ENST00000305671 199 ntBASIC2.08□□□□□ -2.08
TCRBV7S3A2A0A539 SNORD115-3-201ENST00000363100 82 ntBASIC2.08□□□□□ -2.08
TCRBV7S3A2A0A539 RNU6-324P-201ENST00000363957 106 ntBASIC2.08□□□□□ -2.08
TCRBV7S3A2A0A539 HSPE1P13-201ENST00000451143 297 ntBASIC2.08□□□□□ -2.08
TCRBV7S3A2A0A539 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.08□□□□□ -2.08
TCRBV7S3A2A0A539 RNU6-1041P-201ENST00000516254 102 ntBASIC2.08□□□□□ -2.08
TCRBV7S3A2A0A539 RNU1-40P-201ENST00000516816 164 ntBASIC2.08□□□□□ -2.08
TCRBV7S3A2A0A539 RNU1-97P-201ENST00000516872 164 ntBASIC2.08□□□□□ -2.08
TCRBV7S3A2A0A539 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.08□□□□□ -2.08
TCRBV7S3A2A0A539 DEFB108E-201ENST00000524692 240 ntBASIC2.08□□□□□ -2.08
TCRBV7S3A2A0A539 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.08□□□□□ -2.08
TCRBV7S3A2A0A539 AC005786.1-201ENST00000588553 154 ntBASIC2.08□□□□□ -2.08
TCRBV7S3A2A0A539 DEFB117-201ENST00000602356 141 ntBASIC2.08□□□□□ -2.08
TCRBV7S3A2A0A539 AP000942.4-201ENST00000604811 241 ntBASIC2.08□□□□□ -2.08
TCRBV7S3A2A0A539 Y_RNA.783-201ENST00000613546 102 ntBASIC2.08□□□□□ -2.08
TCRBV7S3A2A0A539 AC022513.1-201ENST00000624512 117 ntBASIC2.08□□□□□ -2.08
TCRBV7S3A2A0A539 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
TCRBV7S3A2A0A539 RNU1-96P-201ENST00000364163 162 ntBASIC2.07□□□□□ -2.08
TCRBV7S3A2A0A539 Y_RNA.401-201ENST00000383965 117 ntBASIC2.07□□□□□ -2.08
TCRBV7S3A2A0A539 SNORA64-201ENST00000384674 134 ntBASIC2.07□□□□□ -2.08
TCRBV7S3A2A0A539 RNU6-1248P-201ENST00000391096 64 ntBASIC2.07□□□□□ -2.08
TCRBV7S3A2A0A539 MIR1253-201ENST00000408273 105 ntBASIC2.07□□□□□ -2.08
TCRBV7S3A2A0A539 RNU6-710P-201ENST00000410424 105 ntBASIC2.07□□□□□ -2.08
TCRBV7S3A2A0A539 MTCO1P5-201ENST00000433573 344 ntBASIC2.07□□□□□ -2.08
TCRBV7S3A2A0A539 MRPS10P1-201ENST00000448483 130 ntBASIC2.07□□□□□ -2.08
TCRBV7S3A2A0A539 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.07□□□□□ -2.08
TCRBV7S3A2A0A539 RNU6-1132P-201ENST00000459214 107 ntBASIC2.07□□□□□ -2.08
TCRBV7S3A2A0A539 AC079804.2-201ENST00000490376 200 ntBASIC2.07□□□□□ -2.08
TCRBV7S3A2A0A539 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.07□□□□□ -2.08
TCRBV7S3A2A0A539 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.07□□□□□ -2.08
TCRBV7S3A2A0A539 AL137100.2-201ENST00000555786 315 ntBASIC2.07□□□□□ -2.08
TCRBV7S3A2A0A539 SNORD53-201ENST00000579969 78 ntBASIC2.07□□□□□ -2.08
TCRBV7S3A2A0A539 MIR5089-201ENST00000580047 84 ntBASIC2.07□□□□□ -2.08
TCRBV7S3A2A0A539 U6.73-201ENST00000619194 103 ntBASIC2.07□□□□□ -2.08
TCRBV7S3A2A0A539 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
TCRBV7S3A2A0A539 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.06□□□□□ -2.08
TCRBV7S3A2A0A539 Y_RNA.14-201ENST00000362415 103 ntBASIC2.06□□□□□ -2.08
TCRBV7S3A2A0A539 RNU4-82P-201ENST00000362443 140 ntBASIC2.06□□□□□ -2.08
TCRBV7S3A2A0A539 Y_RNA.124-201ENST00000363339 93 ntBASIC2.06□□□□□ -2.08
TCRBV7S3A2A0A539 AC024067.1-201ENST00000426199 223 ntBASIC2.06□□□□□ -2.08
TCRBV7S3A2A0A539 SUMO1P4-201ENST00000429430 302 ntBASIC2.06□□□□□ -2.08
TCRBV7S3A2A0A539 RPS26P55-201ENST00000471178 356 ntBASIC2.06□□□□□ -2.08
TCRBV7S3A2A0A539 RNA5SP20-201ENST00000515976 84 ntBASIC2.06□□□□□ -2.08
TCRBV7S3A2A0A539 RNU7-193P-201ENST00000516723 65 ntBASIC2.06□□□□□ -2.08
TCRBV7S3A2A0A539 AC009127.3-201ENST00000570531 403 ntBASIC2.06□□□□□ -2.08
TCRBV7S3A2A0A539 AC037487.3-201ENST00000606668 112 ntBASIC2.06□□□□□ -2.08
TCRBV7S3A2A0A539 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
TCRBV7S3A2A0A539 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
TCRBV7S3A2A0A539 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.05□□□□□ -2.08
TCRBV7S3A2A0A539 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.05□□□□□ -2.08
TCRBV7S3A2A0A539 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
TCRBV7S3A2A0A539 UBE2WP1-201ENST00000362030 340 ntBASIC2.05□□□□□ -2.08
TCRBV7S3A2A0A539 RNU6-505P-201ENST00000384427 107 ntBASIC2.05□□□□□ -2.08
TCRBV7S3A2A0A539 MIR515-2-201ENST00000384883 83 ntBASIC2.05□□□□□ -2.08
TCRBV7S3A2A0A539 MIR515-1-201ENST00000384884 83 ntBASIC2.05□□□□□ -2.08
TCRBV7S3A2A0A539 MT-TG-201ENST00000387429 68 ntBASIC2.05□□□□□ -2.08
TCRBV7S3A2A0A539 RNU11-3P-201ENST00000391111 133 ntBASIC2.05□□□□□ -2.08
TCRBV7S3A2A0A539 RNU2-2P-201ENST00000410396 191 ntBASIC2.05□□□□□ -2.08
TCRBV7S3A2A0A539 RNU2-38P-201ENST00000410856 79 ntBASIC2.05□□□□□ -2.08
TCRBV7S3A2A0A539 CST2P1-201ENST00000425770 87 ntBASIC2.05□□□□□ -2.08
TCRBV7S3A2A0A539 AC010154.1-201ENST00000425857 269 ntBASIC2.05□□□□□ -2.08
TCRBV7S3A2A0A539 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.05□□□□□ -2.08
TCRBV7S3A2A0A539 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.05□□□□□ -2.08
TCRBV7S3A2A0A539 RNU6-191P-201ENST00000516295 94 ntBASIC2.05□□□□□ -2.08
TCRBV7S3A2A0A539 RNA5SP82-201ENST00000516707 92 ntBASIC2.05□□□□□ -2.08
TCRBV7S3A2A0A539 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.05□□□□□ -2.08
TCRBV7S3A2A0A539 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms