Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 AP001330.5-201ENST00000607176 411 ntBASIC0.31□□□□□ -2.36
TRAV41A0A0B4J266 AC243829.6-201ENST00000612652 106 ntBASIC0.31□□□□□ -2.36
TRAV41A0A0B4J266 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
TRAV41A0A0B4J266 SNORA25.3-201ENST00000363205 127 ntBASIC0.3□□□□□ -2.36
TRAV41A0A0B4J266 Y_RNA.184-201ENST00000363884 108 ntBASIC0.3□□□□□ -2.36
TRAV41A0A0B4J266 Y_RNA.336-201ENST00000365307 109 ntBASIC0.3□□□□□ -2.36
TRAV41A0A0B4J266 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.3□□□□□ -2.36
TRAV41A0A0B4J266 SNORA69-201ENST00000383895 132 ntBASIC0.3□□□□□ -2.36
TRAV41A0A0B4J266 RNY1P8-201ENST00000383970 114 ntBASIC0.3□□□□□ -2.36
TRAV41A0A0B4J266 SNORA20B-201ENST00000384220 132 ntBASIC0.3□□□□□ -2.36
TRAV41A0A0B4J266 RNU6-163P-201ENST00000384396 106 ntBASIC0.3□□□□□ -2.36
TRAV41A0A0B4J266 MIR598-201ENST00000384868 97 ntBASIC0.3□□□□□ -2.36
TRAV41A0A0B4J266 RNA5SP482-201ENST00000391269 118 ntBASIC0.3□□□□□ -2.36
TRAV41A0A0B4J266 CALM2P3-201ENST00000400429 449 ntBASIC0.3□□□□□ -2.36
TRAV41A0A0B4J266 AL590632.1-201ENST00000424289 371 ntBASIC0.3□□□□□ -2.36
TRAV41A0A0B4J266 DAP3P1-201ENST00000441522 278 ntBASIC0.3□□□□□ -2.36
TRAV41A0A0B4J266 AL353572.1-201ENST00000442490 417 ntBASIC0.3□□□□□ -2.36
TRAV41A0A0B4J266 MTND1P11-201ENST00000456661 876 ntBASIC0.3□□□□□ -2.36
TRAV41A0A0B4J266 AC083798.1-201ENST00000472671 131 ntBASIC0.3□□□□□ -2.36
TRAV41A0A0B4J266 RNU7-28P-201ENST00000516759 62 ntBASIC0.3□□□□□ -2.36
TRAV41A0A0B4J266 RNU6-835P-201ENST00000516974 104 ntBASIC0.3□□□□□ -2.36
TRAV41A0A0B4J266 AP002004.2-201ENST00000531656 154 ntBASIC0.3□□□□□ -2.36
TRAV41A0A0B4J266 MTND1P15-201ENST00000579262 949 ntBASIC0.3□□□□□ -2.36
TRAV41A0A0B4J266 PIGPP4-201ENST00000584447 307 ntBASIC0.3□□□□□ -2.36
TRAV41A0A0B4J266 AC073648.5-201ENST00000603502 305 ntBASIC0.3□□□□□ -2.36
TRAV41A0A0B4J266 AC087752.4-201ENST00000605911 462 ntBASIC0.3□□□□□ -2.36
TRAV41A0A0B4J266 7SK.10-201ENST00000621414 298 ntBASIC0.3□□□□□ -2.36
TRAV41A0A0B4J266 AC244015.1-201ENST00000622301 99 ntBASIC0.3□□□□□ -2.36
TRAV41A0A0B4J266 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.3□□□□□ -2.36
TRAV41A0A0B4J266 AC121333.1-201ENST00000567488 2709 ntBASIC0.3□□□□□ -2.36
TRAV41A0A0B4J266 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
TRAV41A0A0B4J266 MIR103A2-201ENST00000362154 78 ntBASIC0.29□□□□□ -2.36
TRAV41A0A0B4J266 RNU6-254P-201ENST00000363377 107 ntBASIC0.29□□□□□ -2.36
TRAV41A0A0B4J266 Y_RNA.179-201ENST00000363844 90 ntBASIC0.29□□□□□ -2.36
TRAV41A0A0B4J266 RNY1-201ENST00000364228 113 ntBASIC0.29□□□□□ -2.36
TRAV41A0A0B4J266 RNU4-41P-201ENST00000364426 143 ntBASIC0.29□□□□□ -2.36
TRAV41A0A0B4J266 Y_RNA.372-201ENST00000365599 102 ntBASIC0.29□□□□□ -2.36
TRAV41A0A0B4J266 Y_RNA.409-201ENST00000383990 98 ntBASIC0.29□□□□□ -2.36
TRAV41A0A0B4J266 RNU6-790P-201ENST00000384479 105 ntBASIC0.29□□□□□ -2.36
TRAV41A0A0B4J266 RNU6-95P-201ENST00000384697 107 ntBASIC0.29□□□□□ -2.36
TRAV41A0A0B4J266 RNU6-648P-201ENST00000410190 107 ntBASIC0.29□□□□□ -2.36
TRAV41A0A0B4J266 RNU4-55P-201ENST00000410731 137 ntBASIC0.29□□□□□ -2.36
TRAV41A0A0B4J266 RNU5A-5P-201ENST00000411054 116 ntBASIC0.29□□□□□ -2.36
TRAV41A0A0B4J266 AC018865.2-201ENST00000423631 129 ntBASIC0.29□□□□□ -2.36
TRAV41A0A0B4J266 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.29□□□□□ -2.36
TRAV41A0A0B4J266 AC244098.3-201ENST00000424803 96 ntBASIC0.29□□□□□ -2.36
TRAV41A0A0B4J266 AC244023.1-201ENST00000426884 112 ntBASIC0.29□□□□□ -2.36
TRAV41A0A0B4J266 RPL23AP50-201ENST00000434149 455 ntBASIC0.29□□□□□ -2.36
TRAV41A0A0B4J266 U7.7-201ENST00000459276 60 ntBASIC0.29□□□□□ -2.36
TRAV41A0A0B4J266 RPS3AP17-201ENST00000472594 777 ntBASIC0.29□□□□□ -2.36
TRAV41A0A0B4J266 RNU4-57P-201ENST00000515980 135 ntBASIC0.29□□□□□ -2.36
TRAV41A0A0B4J266 RNU6-1198P-201ENST00000516904 67 ntBASIC0.29□□□□□ -2.36
TRAV41A0A0B4J266 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.29□□□□□ -2.36
TRAV41A0A0B4J266 AC025627.3-201ENST00000582078 182 ntBASIC0.29□□□□□ -2.36
TRAV41A0A0B4J266 Z83818.1-201ENST00000603584 150 ntBASIC0.29□□□□□ -2.36
TRAV41A0A0B4J266 AC242498.1-201ENST00000604134 111 ntBASIC0.29□□□□□ -2.36
TRAV41A0A0B4J266 RNU6-94P-201ENST00000607728 107 ntBASIC0.29□□□□□ -2.36
TRAV41A0A0B4J266 AC093913.1-201ENST00000614178 329 ntBASIC0.29□□□□□ -2.36
TRAV41A0A0B4J266 AC007014.2-201ENST00000615581 479 ntBASIC0.29□□□□□ -2.36
TRAV41A0A0B4J266 SEPT14P17-201ENST00000617978 177 ntBASIC0.29□□□□□ -2.36
TRAV41A0A0B4J266 AC243994.1-201ENST00000618627 109 ntBASIC0.29□□□□□ -2.36
TRAV41A0A0B4J266 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
TRAV41A0A0B4J266 MTND5P16-201ENST00000460269 1703 ntBASIC0.28□□□□□ -2.36
TRAV41A0A0B4J266 Y_RNA.118-201ENST00000363300 101 ntBASIC0.28□□□□□ -2.36
TRAV41A0A0B4J266 Y_RNA.296-201ENST00000364930 108 ntBASIC0.28□□□□□ -2.36
TRAV41A0A0B4J266 RNU6-1297P-201ENST00000384415 104 ntBASIC0.28□□□□□ -2.36
TRAV41A0A0B4J266 RNU6-541P-201ENST00000384709 110 ntBASIC0.28□□□□□ -2.36
TRAV41A0A0B4J266 ZNF885P-201ENST00000420174 1098 ntBASIC0.28□□□□□ -2.36
TRAV41A0A0B4J266 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.28□□□□□ -2.36
TRAV41A0A0B4J266 RNU7-41P-201ENST00000515917 61 ntBASIC0.28□□□□□ -2.36
TRAV41A0A0B4J266 RN7SKP164-201ENST00000516138 266 ntBASIC0.28□□□□□ -2.36
TRAV41A0A0B4J266 AC023442.1-201ENST00000531247 422 ntBASIC0.28□□□□□ -2.36
TRAV41A0A0B4J266 AC073114.1-201ENST00000612027 490 ntBASIC0.28□□□□□ -2.36
TRAV41A0A0B4J266 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
TRAV41A0A0B4J266 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.28□□□□□ -2.36
TRAV41A0A0B4J266 AC097520.1-201ENST00000624435 385 ntBASIC0.28□□□□□ -2.36
TRAV41A0A0B4J266 AC068137.4-201ENST00000638485 296 ntBASIC0.28□□□□□ -2.36
TRAV41A0A0B4J266 AC068700.1-201ENST00000565862 3754 ntBASIC0.28□□□□□ -2.37
TRAV41A0A0B4J266 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.28□□□□□ -2.37
TRAV41A0A0B4J266 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
TRAV41A0A0B4J266 SNORA27.1-201ENST00000362604 124 ntBASIC0.27□□□□□ -2.37
TRAV41A0A0B4J266 RNU6-833P-201ENST00000363486 107 ntBASIC0.27□□□□□ -2.37
TRAV41A0A0B4J266 RNU6-280P-201ENST00000364145 104 ntBASIC0.27□□□□□ -2.37
TRAV41A0A0B4J266 Y_RNA.231-201ENST00000364358 102 ntBASIC0.27□□□□□ -2.37
TRAV41A0A0B4J266 RNU6-407P-201ENST00000365280 104 ntBASIC0.27□□□□□ -2.37
TRAV41A0A0B4J266 VTRNA1-3-201ENST00000365645 89 ntBASIC0.27□□□□□ -2.37
TRAV41A0A0B4J266 RNU6-1237P-201ENST00000384777 107 ntBASIC0.27□□□□□ -2.37
TRAV41A0A0B4J266 MIR891A-201ENST00000401237 79 ntBASIC0.27□□□□□ -2.37
TRAV41A0A0B4J266 RNA5SP193-201ENST00000410353 107 ntBASIC0.27□□□□□ -2.37
TRAV41A0A0B4J266 MTCYBP10-201ENST00000424905 650 ntBASIC0.27□□□□□ -2.37
TRAV41A0A0B4J266 AC092423.1-201ENST00000430165 186 ntBASIC0.27□□□□□ -2.37
TRAV41A0A0B4J266 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.27□□□□□ -2.37
TRAV41A0A0B4J266 MTCO1P19-201ENST00000443487 500 ntBASIC0.27□□□□□ -2.37
TRAV41A0A0B4J266 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC0.27□□□□□ -2.37
TRAV41A0A0B4J266 RNA5SP20-201ENST00000515976 84 ntBASIC0.27□□□□□ -2.37
TRAV41A0A0B4J266 RNU6-107P-201ENST00000516643 102 ntBASIC0.27□□□□□ -2.37
TRAV41A0A0B4J266 Y_RNA.695-201ENST00000516715 107 ntBASIC0.27□□□□□ -2.37
TRAV41A0A0B4J266 RPL21P9-201ENST00000556149 474 ntBASIC0.27□□□□□ -2.37
TRAV41A0A0B4J266 RNU6-89P-201ENST00000606519 100 ntBASIC0.27□□□□□ -2.37
TRAV41A0A0B4J266 AC099654.12-201ENST00000639868 649 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms