Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 MRPS10P1-201ENST00000448483 130 ntBASIC0.78□□□□□ -2.28
COMMD3-BMI1R4GMX3 AC010598.1-201ENST00000510378 103 ntBASIC0.78□□□□□ -2.28
COMMD3-BMI1R4GMX3 RNU6-322P-201ENST00000516010 103 ntBASIC0.78□□□□□ -2.28
COMMD3-BMI1R4GMX3 RNA5SP220-201ENST00000516298 104 ntBASIC0.78□□□□□ -2.28
COMMD3-BMI1R4GMX3 RNA5SP168-201ENST00000516642 112 ntBASIC0.78□□□□□ -2.28
COMMD3-BMI1R4GMX3 RNU6-197P-201ENST00000516680 100 ntBASIC0.78□□□□□ -2.28
COMMD3-BMI1R4GMX3 RNU6-256P-201ENST00000516747 97 ntBASIC0.78□□□□□ -2.28
COMMD3-BMI1R4GMX3 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC0.78□□□□□ -2.28
COMMD3-BMI1R4GMX3 AC009248.2-201ENST00000619826 254 ntBASIC0.78□□□□□ -2.28
COMMD3-BMI1R4GMX3 MIR1321-201ENST00000637766 79 ntBASIC0.78□□□□□ -2.28
COMMD3-BMI1R4GMX3 RNU6-199P-201ENST00000362954 107 ntBASIC0.77□□□□□ -2.29
COMMD3-BMI1R4GMX3 Y_RNA.184-201ENST00000363884 108 ntBASIC0.77□□□□□ -2.29
COMMD3-BMI1R4GMX3 Y_RNA.796-201ENST00000364268 102 ntBASIC0.77□□□□□ -2.29
COMMD3-BMI1R4GMX3 Y_RNA.256-201ENST00000364594 104 ntBASIC0.77□□□□□ -2.29
COMMD3-BMI1R4GMX3 Y_RNA.799-201ENST00000364992 102 ntBASIC0.77□□□□□ -2.29
COMMD3-BMI1R4GMX3 SNORD114-22-201ENST00000365423 72 ntBASIC0.77□□□□□ -2.29
COMMD3-BMI1R4GMX3 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.77□□□□□ -2.29
COMMD3-BMI1R4GMX3 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC0.77□□□□□ -2.29
COMMD3-BMI1R4GMX3 AL606490.4-201ENST00000423117 127 ntBASIC0.77□□□□□ -2.29
COMMD3-BMI1R4GMX3 Z82188.1-201ENST00000436709 154 ntBASIC0.77□□□□□ -2.29
COMMD3-BMI1R4GMX3 MTCO3P18-201ENST00000440206 761 ntBASIC0.77□□□□□ -2.29
COMMD3-BMI1R4GMX3 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC0.77□□□□□ -2.29
COMMD3-BMI1R4GMX3 SNORD124-201ENST00000459577 104 ntBASIC0.77□□□□□ -2.29
COMMD3-BMI1R4GMX3 AC091179.3-201ENST00000474761 144 ntBASIC0.77□□□□□ -2.29
COMMD3-BMI1R4GMX3 AC048334.1-201ENST00000477975 159 ntBASIC0.77□□□□□ -2.29
COMMD3-BMI1R4GMX3 AC105758.1-201ENST00000506038 399 ntBASIC0.77□□□□□ -2.29
COMMD3-BMI1R4GMX3 RNU6-113P-201ENST00000516653 101 ntBASIC0.77□□□□□ -2.29
COMMD3-BMI1R4GMX3 AC090142.3-201ENST00000519012 385 ntBASIC0.77□□□□□ -2.29
COMMD3-BMI1R4GMX3 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.77□□□□□ -2.29
COMMD3-BMI1R4GMX3 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.77□□□□□ -2.29
COMMD3-BMI1R4GMX3 AC090049.2-201ENST00000550377 109 ntBASIC0.77□□□□□ -2.29
COMMD3-BMI1R4GMX3 MIR4438-201ENST00000585271 93 ntBASIC0.77□□□□□ -2.29
COMMD3-BMI1R4GMX3 AC068790.6-201ENST00000602558 258 ntBASIC0.77□□□□□ -2.29
COMMD3-BMI1R4GMX3 FAM71BP1-201ENST00000604431 523 ntBASIC0.77□□□□□ -2.29
COMMD3-BMI1R4GMX3 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.77□□□□□ -2.29
COMMD3-BMI1R4GMX3 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
COMMD3-BMI1R4GMX3 SNORA2.2-201ENST00000365473 135 ntBASIC0.76□□□□□ -2.29
COMMD3-BMI1R4GMX3 Y_RNA.414-201ENST00000384011 101 ntBASIC0.76□□□□□ -2.29
COMMD3-BMI1R4GMX3 Y_RNA.415-201ENST00000384012 112 ntBASIC0.76□□□□□ -2.29
COMMD3-BMI1R4GMX3 RNU6-483P-201ENST00000384088 108 ntBASIC0.76□□□□□ -2.29
COMMD3-BMI1R4GMX3 RNU6-42P-201ENST00000384165 107 ntBASIC0.76□□□□□ -2.29
COMMD3-BMI1R4GMX3 MIR487A-201ENST00000385009 80 ntBASIC0.76□□□□□ -2.29
COMMD3-BMI1R4GMX3 MTCYBP4-201ENST00000401524 249 ntBASIC0.76□□□□□ -2.29
COMMD3-BMI1R4GMX3 AC243428.1-201ENST00000421099 264 ntBASIC0.76□□□□□ -2.29
COMMD3-BMI1R4GMX3 SNORD65B-201ENST00000459126 73 ntBASIC0.76□□□□□ -2.29
COMMD3-BMI1R4GMX3 RNU7-66P-201ENST00000459469 62 ntBASIC0.76□□□□□ -2.29
COMMD3-BMI1R4GMX3 snoU13.18-201ENST00000459483 104 ntBASIC0.76□□□□□ -2.29
COMMD3-BMI1R4GMX3 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.76□□□□□ -2.29
COMMD3-BMI1R4GMX3 RN7SKP49-201ENST00000516675 260 ntBASIC0.76□□□□□ -2.29
COMMD3-BMI1R4GMX3 AL590705.4-201ENST00000532209 134 ntBASIC0.76□□□□□ -2.29
COMMD3-BMI1R4GMX3 CBX3P8-201ENST00000532412 525 ntBASIC0.76□□□□□ -2.29
COMMD3-BMI1R4GMX3 AK6P2-201ENST00000549020 471 ntBASIC0.76□□□□□ -2.29
COMMD3-BMI1R4GMX3 RPL21P9-201ENST00000556149 474 ntBASIC0.76□□□□□ -2.29
COMMD3-BMI1R4GMX3 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.76□□□□□ -2.29
COMMD3-BMI1R4GMX3 AC010999.1-201ENST00000611856 324 ntBASIC0.76□□□□□ -2.29
COMMD3-BMI1R4GMX3 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.76□□□□□ -2.29
COMMD3-BMI1R4GMX3 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.76□□□□□ -2.29
COMMD3-BMI1R4GMX3 AC008163.1-202ENST00000636004 2889 ntBASIC0.75□□□□□ -2.29
COMMD3-BMI1R4GMX3 HSBP1P2-201ENST00000299671 229 ntBASIC0.75□□□□□ -2.29
COMMD3-BMI1R4GMX3 SNORD114-27-201ENST00000363766 70 ntBASIC0.75□□□□□ -2.29
COMMD3-BMI1R4GMX3 RNU1-93P-201ENST00000364704 169 ntBASIC0.75□□□□□ -2.29
COMMD3-BMI1R4GMX3 SNORD87-201ENST00000364849 89 ntBASIC0.75□□□□□ -2.29
COMMD3-BMI1R4GMX3 Y_RNA.355-201ENST00000365462 98 ntBASIC0.75□□□□□ -2.29
COMMD3-BMI1R4GMX3 SNORD116-11-201ENST00000383882 92 ntBASIC0.75□□□□□ -2.29
COMMD3-BMI1R4GMX3 RNU1-139P-201ENST00000391307 165 ntBASIC0.75□□□□□ -2.29
COMMD3-BMI1R4GMX3 AL451046.2-201ENST00000403074 277 ntBASIC0.75□□□□□ -2.29
COMMD3-BMI1R4GMX3 AC114482.1-201ENST00000418010 247 ntBASIC0.75□□□□□ -2.29
COMMD3-BMI1R4GMX3 AC002429.1-201ENST00000437672 148 ntBASIC0.75□□□□□ -2.29
COMMD3-BMI1R4GMX3 MTCO2P7-201ENST00000446518 666 ntBASIC0.75□□□□□ -2.29
COMMD3-BMI1R4GMX3 MTND1P29-201ENST00000448112 647 ntBASIC0.75□□□□□ -2.29
COMMD3-BMI1R4GMX3 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.75□□□□□ -2.29
COMMD3-BMI1R4GMX3 RPL30P10-201ENST00000488148 337 ntBASIC0.75□□□□□ -2.29
COMMD3-BMI1R4GMX3 Y_RNA.683-201ENST00000516508 93 ntBASIC0.75□□□□□ -2.29
COMMD3-BMI1R4GMX3 FRG2DP-202ENST00000566967 323 ntBASIC0.75□□□□□ -2.29
COMMD3-BMI1R4GMX3 FAM106DP-201ENST00000586416 501 ntBASIC0.75□□□□□ -2.29
COMMD3-BMI1R4GMX3 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.75□□□□□ -2.29
COMMD3-BMI1R4GMX3 MIR6857-201ENST00000613267 93 ntBASIC0.75□□□□□ -2.29
COMMD3-BMI1R4GMX3 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.75□□□□□ -2.29
COMMD3-BMI1R4GMX3 MIR6079-201ENST00000635807 62 ntBASIC0.75□□□□□ -2.29
COMMD3-BMI1R4GMX3 ZNF299P-201ENST00000406845 1804 ntBASIC0.74□□□□□ -2.29
COMMD3-BMI1R4GMX3 MIR96-201ENST00000362288 78 ntBASIC0.74□□□□□ -2.29
COMMD3-BMI1R4GMX3 RNU6-451P-201ENST00000362921 107 ntBASIC0.74□□□□□ -2.29
COMMD3-BMI1R4GMX3 Y_RNA.124-201ENST00000363339 93 ntBASIC0.74□□□□□ -2.29
COMMD3-BMI1R4GMX3 SNORD116-1-201ENST00000384335 95 ntBASIC0.74□□□□□ -2.29
COMMD3-BMI1R4GMX3 Y_RNA.615-201ENST00000410769 117 ntBASIC0.74□□□□□ -2.29
COMMD3-BMI1R4GMX3 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.74□□□□□ -2.29
COMMD3-BMI1R4GMX3 AC245047.7-201ENST00000440265 293 ntBASIC0.74□□□□□ -2.29
COMMD3-BMI1R4GMX3 SUMO1P2-201ENST00000452524 304 ntBASIC0.74□□□□□ -2.29
COMMD3-BMI1R4GMX3 RPL39P39-201ENST00000455840 151 ntBASIC0.74□□□□□ -2.29
COMMD3-BMI1R4GMX3 AC046134.1-201ENST00000514454 666 ntBASIC0.74□□□□□ -2.29
COMMD3-BMI1R4GMX3 RNU6-1114P-201ENST00000516022 107 ntBASIC0.74□□□□□ -2.29
COMMD3-BMI1R4GMX3 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.74□□□□□ -2.29
COMMD3-BMI1R4GMX3 AL121579.1-201ENST00000555129 305 ntBASIC0.74□□□□□ -2.29
COMMD3-BMI1R4GMX3 MIR4273-201ENST00000582824 84 ntBASIC0.74□□□□□ -2.29
COMMD3-BMI1R4GMX3 AC106800.4-201ENST00000614905 153 ntBASIC0.74□□□□□ -2.29
COMMD3-BMI1R4GMX3 MIR6734-201ENST00000621166 68 ntBASIC0.74□□□□□ -2.29
COMMD3-BMI1R4GMX3 Y_RNA.118-201ENST00000363300 101 ntBASIC0.73□□□□□ -2.29
COMMD3-BMI1R4GMX3 RNY1P14-201ENST00000384426 108 ntBASIC0.73□□□□□ -2.29
COMMD3-BMI1R4GMX3 SNORA80D-201ENST00000384488 135 ntBASIC0.73□□□□□ -2.29
COMMD3-BMI1R4GMX3 MIR10B-201ENST00000385011 110 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms