Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 AL158032.1-201ENST00000605401 106 ntBASIC-1.1□□□□□ -2.59
AP4S1Q9Y587 AC027279.3-201ENST00000625055 122 ntBASIC-1.1□□□□□ -2.59
AP4S1Q9Y587 Y_RNA.100-201ENST00000363141 102 ntBASIC-1.11□□□□□ -2.59
AP4S1Q9Y587 Y_RNA.267-201ENST00000364679 109 ntBASIC-1.11□□□□□ -2.59
AP4S1Q9Y587 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-1.11□□□□□ -2.59
AP4S1Q9Y587 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-1.11□□□□□ -2.59
AP4S1Q9Y587 MTND1P26-201ENST00000440488 538 ntBASIC-1.11□□□□□ -2.59
AP4S1Q9Y587 snoU13.6-201ENST00000458785 104 ntBASIC-1.11□□□□□ -2.59
AP4S1Q9Y587 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-1.11□□□□□ -2.59
AP4S1Q9Y587 AC091178.2-201ENST00000584401 117 ntBASIC-1.11□□□□□ -2.59
AP4S1Q9Y587 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-1.11□□□□□ -2.59
AP4S1Q9Y587 AC091304.10-201ENST00000641554 121 ntBASIC-1.11□□□□□ -2.59
AP4S1Q9Y587 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-1.11□□□□□ -2.59
AP4S1Q9Y587 RNU6-1048P-201ENST00000364054 107 ntBASIC-1.12□□□□□ -2.59
AP4S1Q9Y587 MIR625-201ENST00000385047 85 ntBASIC-1.12□□□□□ -2.59
AP4S1Q9Y587 MIR125B2-201ENST00000385128 89 ntBASIC-1.12□□□□□ -2.59
AP4S1Q9Y587 SNORD123-201ENST00000459473 70 ntBASIC-1.12□□□□□ -2.59
AP4S1Q9Y587 RNU6-123P-201ENST00000516163 102 ntBASIC-1.12□□□□□ -2.59
AP4S1Q9Y587 AC068587.5-201ENST00000528506 175 ntBASIC-1.12□□□□□ -2.59
AP4S1Q9Y587 MIR5708-201ENST00000579723 85 ntBASIC-1.12□□□□□ -2.59
AP4S1Q9Y587 MIR4438-201ENST00000585271 93 ntBASIC-1.12□□□□□ -2.59
AP4S1Q9Y587 RNU6-1322P-201ENST00000364309 107 ntBASIC-1.13□□□□□ -2.59
AP4S1Q9Y587 U8.5-201ENST00000364528 136 ntBASIC-1.13□□□□□ -2.59
AP4S1Q9Y587 RNY3P13-201ENST00000365542 102 ntBASIC-1.13□□□□□ -2.59
AP4S1Q9Y587 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.13□□□□□ -2.59
AP4S1Q9Y587 RNU6-25P-201ENST00000383873 107 ntBASIC-1.13□□□□□ -2.59
AP4S1Q9Y587 RNU6-48P-201ENST00000384161 107 ntBASIC-1.13□□□□□ -2.59
AP4S1Q9Y587 RNU6-15P-201ENST00000384534 107 ntBASIC-1.13□□□□□ -2.59
AP4S1Q9Y587 RNU6-29P-201ENST00000384637 107 ntBASIC-1.13□□□□□ -2.59
AP4S1Q9Y587 MIR604-201ENST00000384880 94 ntBASIC-1.13□□□□□ -2.59
AP4S1Q9Y587 MIR136-201ENST00000385207 82 ntBASIC-1.13□□□□□ -2.59
AP4S1Q9Y587 MT-TQ-201ENST00000387372 72 ntBASIC-1.13□□□□□ -2.59
AP4S1Q9Y587 MIR873-201ENST00000401120 77 ntBASIC-1.13□□□□□ -2.59
AP4S1Q9Y587 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC-1.13□□□□□ -2.59
AP4S1Q9Y587 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC-1.13□□□□□ -2.59
AP4S1Q9Y587 MTATP6P26-201ENST00000445926 662 ntBASIC-1.13□□□□□ -2.59
AP4S1Q9Y587 AC107297.1-201ENST00000459991 176 ntBASIC-1.13□□□□□ -2.59
AP4S1Q9Y587 Y_RNA.666-201ENST00000516187 112 ntBASIC-1.13□□□□□ -2.59
AP4S1Q9Y587 RNU6-469P-201ENST00000516253 101 ntBASIC-1.13□□□□□ -2.59
AP4S1Q9Y587 RNA5SP47-201ENST00000517230 109 ntBASIC-1.13□□□□□ -2.59
AP4S1Q9Y587 AP002004.2-201ENST00000531656 154 ntBASIC-1.13□□□□□ -2.59
AP4S1Q9Y587 MTND1P8-201ENST00000571424 950 ntBASIC-1.13□□□□□ -2.59
AP4S1Q9Y587 AC073539.2-201ENST00000597113 165 ntBASIC-1.13□□□□□ -2.59
AP4S1Q9Y587 AC099785.1-201ENST00000605697 437 ntBASIC-1.13□□□□□ -2.59
AP4S1Q9Y587 MIR6507-201ENST00000613630 70 ntBASIC-1.13□□□□□ -2.59
AP4S1Q9Y587 AC134878.1-201ENST00000619901 243 ntBASIC-1.13□□□□□ -2.59
AP4S1Q9Y587 uc_338.22-201ENST00000622722 187 ntBASIC-1.13□□□□□ -2.59
AP4S1Q9Y587 AL078596.1-201ENST00000624856 447 ntBASIC-1.13□□□□□ -2.59
AP4S1Q9Y587 RNU5E-10P-201ENST00000363506 118 ntBASIC-1.14□□□□□ -2.59
AP4S1Q9Y587 Y_RNA.552-201ENST00000384665 112 ntBASIC-1.14□□□□□ -2.59
AP4S1Q9Y587 MTCO3P40-201ENST00000392516 676 ntBASIC-1.14□□□□□ -2.59
AP4S1Q9Y587 MIR548L-201ENST00000408303 86 ntBASIC-1.14□□□□□ -2.59
AP4S1Q9Y587 RNU2-54P-201ENST00000410299 190 ntBASIC-1.14□□□□□ -2.59
AP4S1Q9Y587 ELOCP21-201ENST00000412558 336 ntBASIC-1.14□□□□□ -2.59
AP4S1Q9Y587 AC243428.1-201ENST00000421099 264 ntBASIC-1.14□□□□□ -2.59
AP4S1Q9Y587 MTCO1P20-201ENST00000425366 358 ntBASIC-1.14□□□□□ -2.59
AP4S1Q9Y587 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-1.14□□□□□ -2.59
AP4S1Q9Y587 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-1.14□□□□□ -2.59
AP4S1Q9Y587 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC-1.14□□□□□ -2.59
AP4S1Q9Y587 RNU6-341P-201ENST00000516973 96 ntBASIC-1.14□□□□□ -2.59
AP4S1Q9Y587 RNU7-156P-201ENST00000517214 74 ntBASIC-1.14□□□□□ -2.59
AP4S1Q9Y587 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC-1.14□□□□□ -2.59
AP4S1Q9Y587 AC026470.2-201ENST00000561492 181 ntBASIC-1.14□□□□□ -2.59
AP4S1Q9Y587 AC144521.1-201ENST00000607148 956 ntBASIC-1.14□□□□□ -2.59
AP4S1Q9Y587 AC012467.1-201ENST00000607740 256 ntBASIC-1.14□□□□□ -2.59
AP4S1Q9Y587 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC-1.14□□□□□ -2.59
AP4S1Q9Y587 AC016597.2-201ENST00000613256 341 ntBASIC-1.14□□□□□ -2.59
AP4S1Q9Y587 AL139418.1-201ENST00000613613 177 ntBASIC-1.14□□□□□ -2.59
AP4S1Q9Y587 AC008873.1-201ENST00000625051 138 ntBASIC-1.14□□□□□ -2.59
AP4S1Q9Y587 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-1.14□□□□□ -2.59
AP4S1Q9Y587 MTND5P32-201ENST00000560711 1802 ntBASIC-1.15□□□□□ -2.59
AP4S1Q9Y587 MIR16-2-201ENST00000362117 81 ntBASIC-1.15□□□□□ -2.59
AP4S1Q9Y587 RNU6-1162P-201ENST00000384443 104 ntBASIC-1.15□□□□□ -2.59
AP4S1Q9Y587 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-1.15□□□□□ -2.59
AP4S1Q9Y587 RPS29P13-201ENST00000402041 169 ntBASIC-1.15□□□□□ -2.59
AP4S1Q9Y587 RPS26P42-201ENST00000413485 326 ntBASIC-1.15□□□□□ -2.59
AP4S1Q9Y587 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC-1.15□□□□□ -2.59
AP4S1Q9Y587 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC-1.15□□□□□ -2.59
AP4S1Q9Y587 AC046134.1-201ENST00000514454 666 ntBASIC-1.15□□□□□ -2.59
AP4S1Q9Y587 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.15□□□□□ -2.59
AP4S1Q9Y587 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.15□□□□□ -2.59
AP4S1Q9Y587 MIR544B-201ENST00000582372 78 ntBASIC-1.15□□□□□ -2.59
AP4S1Q9Y587 MIR4677-201ENST00000584153 80 ntBASIC-1.15□□□□□ -2.59
AP4S1Q9Y587 AC087683.1-201ENST00000591187 441 ntBASIC-1.15□□□□□ -2.59
AP4S1Q9Y587 BNIP3P26-201ENST00000600827 554 ntBASIC-1.15□□□□□ -2.59
AP4S1Q9Y587 OR4H6P-202ENST00000603819 340 ntBASIC-1.15□□□□□ -2.59
AP4S1Q9Y587 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC-1.15□□□□□ -2.59
AP4S1Q9Y587 AC078880.5-201ENST00000617845 421 ntBASIC-1.15□□□□□ -2.59
AP4S1Q9Y587 RNU4-73P-201ENST00000363164 141 ntBASIC-1.16□□□□□ -2.6
AP4S1Q9Y587 RNU6-125P-201ENST00000384505 107 ntBASIC-1.16□□□□□ -2.6
AP4S1Q9Y587 MIR224-201ENST00000384889 81 ntBASIC-1.16□□□□□ -2.6
AP4S1Q9Y587 RNU6-607P-201ENST00000411283 108 ntBASIC-1.16□□□□□ -2.6
AP4S1Q9Y587 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC-1.16□□□□□ -2.6
AP4S1Q9Y587 MTND1P32-201ENST00000433043 938 ntBASIC-1.16□□□□□ -2.6
AP4S1Q9Y587 MRPS10P1-201ENST00000448483 130 ntBASIC-1.16□□□□□ -2.6
AP4S1Q9Y587 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC-1.16□□□□□ -2.6
AP4S1Q9Y587 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC-1.16□□□□□ -2.6
AP4S1Q9Y587 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC-1.16□□□□□ -2.6
AP4S1Q9Y587 AC012409.4-201ENST00000612923 249 ntBASIC-1.16□□□□□ -2.6
AP4S1Q9Y587 UGP2-231ENST00000627474 264 ntTSL 5 BASIC-1.16□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms