Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM35Q9UPQ4 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM35Q9UPQ4 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM35Q9UPQ4 DBIP2-201ENST00000419076 262 ntBASIC4.9□□□□□ -1.63
TRIM35Q9UPQ4 AC004552.1-201ENST00000419089 348 ntBASIC4.9□□□□□ -1.63
TRIM35Q9UPQ4 TRBV25OR9-2-201ENST00000438417 374 ntBASIC4.9□□□□□ -1.63
TRIM35Q9UPQ4 RPS26P3-201ENST00000470205 348 ntBASIC4.9□□□□□ -1.63
TRIM35Q9UPQ4 AC090543.2-201ENST00000483963 348 ntBASIC4.9□□□□□ -1.63
TRIM35Q9UPQ4 AC004057.1-201ENST00000485827 348 ntBASIC4.9□□□□□ -1.63
TRIM35Q9UPQ4 AC093729.1-201ENST00000513074 128 ntBASIC4.9□□□□□ -1.63
TRIM35Q9UPQ4 AC023632.4-201ENST00000517783 191 ntBASIC4.9□□□□□ -1.63
TRIM35Q9UPQ4 AP003484.1-201ENST00000530974 250 ntBASIC4.9□□□□□ -1.63
TRIM35Q9UPQ4 AC079598.5-201ENST00000547460 117 ntBASIC4.9□□□□□ -1.63
TRIM35Q9UPQ4 Clostridiales-1.3-201ENST00000637703 147 ntBASIC4.9□□□□□ -1.63
TRIM35Q9UPQ4 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.9□□□□□ -1.63
TRIM35Q9UPQ4 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
TRIM35Q9UPQ4 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
TRIM35Q9UPQ4 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.89□□□□□ -1.63
TRIM35Q9UPQ4 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM35Q9UPQ4 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.89□□□□□ -1.63
TRIM35Q9UPQ4 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM35Q9UPQ4 RNU6-1313P-201ENST00000362622 102 ntBASIC4.89□□□□□ -1.63
TRIM35Q9UPQ4 SNORA1.1-201ENST00000364671 133 ntBASIC4.89□□□□□ -1.63
TRIM35Q9UPQ4 RNA5SP51-201ENST00000364750 119 ntBASIC4.89□□□□□ -1.63
TRIM35Q9UPQ4 SNORA57.3-201ENST00000411095 141 ntBASIC4.89□□□□□ -1.63
TRIM35Q9UPQ4 FTH1P12-201ENST00000432137 551 ntBASIC4.89□□□□□ -1.63
TRIM35Q9UPQ4 RNA5SP164-201ENST00000516533 110 ntBASIC4.89□□□□□ -1.63
TRIM35Q9UPQ4 SNORA67.7-201ENST00000516664 135 ntBASIC4.89□□□□□ -1.63
TRIM35Q9UPQ4 AC002984.1-201ENST00000591692 448 ntBASIC4.89□□□□□ -1.63
TRIM35Q9UPQ4 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.89□□□□□ -1.63
TRIM35Q9UPQ4 AL512310.12-203ENST00000640543 90 ntBASIC4.89□□□□□ -1.63
TRIM35Q9UPQ4 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM35Q9UPQ4 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM35Q9UPQ4 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM35Q9UPQ4 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.89□□□□□ -1.63
TRIM35Q9UPQ4 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
TRIM35Q9UPQ4 AC010300.1-201ENST00000600671 5134 ntBASIC4.89□□□□□ -1.63
TRIM35Q9UPQ4 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM35Q9UPQ4 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM35Q9UPQ4 SNORA84-201ENST00000459229 133 ntBASIC4.88□□□□□ -1.63
TRIM35Q9UPQ4 RNU6-1291P-201ENST00000516591 104 ntBASIC4.88□□□□□ -1.63
TRIM35Q9UPQ4 AC008011.1-201ENST00000545989 227 ntBASIC4.88□□□□□ -1.63
TRIM35Q9UPQ4 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.88□□□□□ -1.63
TRIM35Q9UPQ4 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM35Q9UPQ4 AC018630.2-201ENST00000534866 2403 ntBASIC4.88□□□□□ -1.63
TRIM35Q9UPQ4 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
TRIM35Q9UPQ4 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM35Q9UPQ4 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM35Q9UPQ4 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
TRIM35Q9UPQ4 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
TRIM35Q9UPQ4 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM35Q9UPQ4 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
TRIM35Q9UPQ4 RNU6-442P-201ENST00000383968 104 ntBASIC4.87□□□□□ -1.63
TRIM35Q9UPQ4 RNA5SP424-201ENST00000390988 115 ntBASIC4.87□□□□□ -1.63
TRIM35Q9UPQ4 RNU11-5P-201ENST00000391216 129 ntBASIC4.87□□□□□ -1.63
TRIM35Q9UPQ4 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.87□□□□□ -1.63
TRIM35Q9UPQ4 AL035398.1-201ENST00000430869 322 ntBASIC4.87□□□□□ -1.63
TRIM35Q9UPQ4 HMGN2P21-201ENST00000447764 270 ntBASIC4.87□□□□□ -1.63
TRIM35Q9UPQ4 RPL36AP48-201ENST00000485521 314 ntBASIC4.87□□□□□ -1.63
TRIM35Q9UPQ4 MIR3158-1-201ENST00000583596 81 ntBASIC4.87□□□□□ -1.63
TRIM35Q9UPQ4 CR392039.5-201ENST00000623201 510 ntBASIC4.87□□□□□ -1.63
TRIM35Q9UPQ4 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM35Q9UPQ4 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM35Q9UPQ4 AC015813.6-201ENST00000624409 5808 ntBASIC4.87□□□□□ -1.63
TRIM35Q9UPQ4 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM35Q9UPQ4 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
TRIM35Q9UPQ4 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
TRIM35Q9UPQ4 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
TRIM35Q9UPQ4 MIR522-201ENST00000385071 87 ntBASIC4.86□□□□□ -1.63
TRIM35Q9UPQ4 RNU4-37P-201ENST00000410214 84 ntBASIC4.86□□□□□ -1.63
TRIM35Q9UPQ4 AL133547.1-201ENST00000448546 220 ntBASIC4.86□□□□□ -1.63
TRIM35Q9UPQ4 RNU1-95P-201ENST00000516357 160 ntBASIC4.86□□□□□ -1.63
TRIM35Q9UPQ4 RNU1-128P-201ENST00000516704 160 ntBASIC4.86□□□□□ -1.63
TRIM35Q9UPQ4 MIR376B-201ENST00000614515 100 ntBASIC4.86□□□□□ -1.63
TRIM35Q9UPQ4 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC4.86□□□□□ -1.63
TRIM35Q9UPQ4 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
TRIM35Q9UPQ4 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM35Q9UPQ4 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM35Q9UPQ4 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM35Q9UPQ4 LINC02471-203ENST00000641941 4752 ntBASIC4.85□□□□□ -1.63
TRIM35Q9UPQ4 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM35Q9UPQ4 MIR519C-201ENST00000385053 87 ntBASIC4.85□□□□□ -1.63
TRIM35Q9UPQ4 AL627390.1-201ENST00000396055 340 ntBASIC4.85□□□□□ -1.63
TRIM35Q9UPQ4 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM35Q9UPQ4 AL161932.1-201ENST00000437408 146 ntBASIC4.85□□□□□ -1.63
TRIM35Q9UPQ4 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.85□□□□□ -1.63
TRIM35Q9UPQ4 AC087499.4-201ENST00000448505 178 ntBASIC4.85□□□□□ -1.63
TRIM35Q9UPQ4 RNA5SP468-201ENST00000516782 93 ntBASIC4.85□□□□□ -1.63
TRIM35Q9UPQ4 AC140658.3-201ENST00000567603 271 ntBASIC4.85□□□□□ -1.63
TRIM35Q9UPQ4 AC090115.4-201ENST00000609970 188 ntBASIC4.85□□□□□ -1.63
TRIM35Q9UPQ4 MIR4727-201ENST00000622232 55 ntBASIC4.85□□□□□ -1.63
TRIM35Q9UPQ4 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM35Q9UPQ4 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM35Q9UPQ4 AC073346.2-201ENST00000624724 2058 ntBASIC4.85□□□□□ -1.63
TRIM35Q9UPQ4 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM35Q9UPQ4 BCLAF1P1-201ENST00000505813 2752 ntBASIC4.85□□□□□ -1.63
TRIM35Q9UPQ4 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
TRIM35Q9UPQ4 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.85□□□□□ -1.63
TRIM35Q9UPQ4 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM35Q9UPQ4 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 167.4 ms