Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 AL356157.2-201ENST00000605122 111 ntBASIC1.94□□□□□ -2.1
NOTCH3Q9UM47 AC010999.1-201ENST00000611856 324 ntBASIC1.94□□□□□ -2.1
NOTCH3Q9UM47 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
NOTCH3Q9UM47 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.94□□□□□ -2.1
NOTCH3Q9UM47 U2.21-201ENST00000637295 81 ntBASIC1.94□□□□□ -2.1
NOTCH3Q9UM47 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.94□□□□□ -2.1
NOTCH3Q9UM47 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
NOTCH3Q9UM47 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.93□□□□□ -2.1
NOTCH3Q9UM47 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.93□□□□□ -2.1
NOTCH3Q9UM47 GABRG2-229ENST00000641017 3628 ntBASIC1.93□□□□□ -2.1
NOTCH3Q9UM47 Y_RNA.287-201ENST00000364853 94 ntBASIC1.93□□□□□ -2.1
NOTCH3Q9UM47 RNU6-294P-201ENST00000364999 102 ntBASIC1.93□□□□□ -2.1
NOTCH3Q9UM47 Z98749.2-208ENST00000381646 500 ntBASIC1.93□□□□□ -2.1
NOTCH3Q9UM47 RNU6-1310P-201ENST00000384153 107 ntBASIC1.93□□□□□ -2.1
NOTCH3Q9UM47 MIR626-201ENST00000385032 94 ntBASIC1.93□□□□□ -2.1
NOTCH3Q9UM47 MIR549A-201ENST00000385268 96 ntBASIC1.93□□□□□ -2.1
NOTCH3Q9UM47 SNORA26.3-201ENST00000391119 136 ntBASIC1.93□□□□□ -2.1
NOTCH3Q9UM47 MIR888-201ENST00000401186 77 ntBASIC1.93□□□□□ -2.1
NOTCH3Q9UM47 U3.37-201ENST00000408528 213 ntBASIC1.93□□□□□ -2.1
NOTCH3Q9UM47 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.93□□□□□ -2.1
NOTCH3Q9UM47 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.93□□□□□ -2.1
NOTCH3Q9UM47 HSPE1P13-201ENST00000451143 297 ntBASIC1.93□□□□□ -2.1
NOTCH3Q9UM47 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC1.93□□□□□ -2.1
NOTCH3Q9UM47 AC006445.2-201ENST00000510061 472 ntBASIC1.93□□□□□ -2.1
NOTCH3Q9UM47 AC091874.1-201ENST00000511402 339 ntBASIC1.93□□□□□ -2.1
NOTCH3Q9UM47 RNU6-537P-201ENST00000517277 103 ntBASIC1.93□□□□□ -2.1
NOTCH3Q9UM47 AL391813.1-201ENST00000603098 260 ntBASIC1.93□□□□□ -2.1
NOTCH3Q9UM47 AP001005.3-201ENST00000622049 129 ntBASIC1.93□□□□□ -2.1
NOTCH3Q9UM47 SNORA43.4-201ENST00000629559 138 ntBASIC1.93□□□□□ -2.1
NOTCH3Q9UM47 AC095038.3-201ENST00000634439 195 ntBASIC1.93□□□□□ -2.1
NOTCH3Q9UM47 AL592437.2-201ENST00000421655 2434 ntBASIC1.93□□□□□ -2.1
NOTCH3Q9UM47 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
NOTCH3Q9UM47 Y_RNA.24-201ENST00000362508 103 ntBASIC1.92□□□□□ -2.1
NOTCH3Q9UM47 Y_RNA.280-201ENST00000364765 112 ntBASIC1.92□□□□□ -2.1
NOTCH3Q9UM47 RNA5SP173-201ENST00000364857 136 ntBASIC1.92□□□□□ -2.1
NOTCH3Q9UM47 Y_RNA.337-201ENST00000365312 102 ntBASIC1.92□□□□□ -2.1
NOTCH3Q9UM47 RNU6-629P-201ENST00000384061 103 ntBASIC1.92□□□□□ -2.1
NOTCH3Q9UM47 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
NOTCH3Q9UM47 RPS26P42-201ENST00000413485 326 ntBASIC1.92□□□□□ -2.1
NOTCH3Q9UM47 GPM6BP3-201ENST00000442797 145 ntBASIC1.92□□□□□ -2.1
NOTCH3Q9UM47 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC1.92□□□□□ -2.1
NOTCH3Q9UM47 AL031737.1-201ENST00000450125 223 ntBASIC1.92□□□□□ -2.1
NOTCH3Q9UM47 Y_RNA.692-201ENST00000516627 105 ntBASIC1.92□□□□□ -2.1
NOTCH3Q9UM47 RNU2-44P-201ENST00000516795 194 ntBASIC1.92□□□□□ -2.1
NOTCH3Q9UM47 RN7SKP282-201ENST00000516824 299 ntBASIC1.92□□□□□ -2.1
NOTCH3Q9UM47 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC1.92□□□□□ -2.1
NOTCH3Q9UM47 TRAV28-201ENST00000557548 323 ntBASIC1.92□□□□□ -2.1
NOTCH3Q9UM47 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC1.92□□□□□ -2.1
NOTCH3Q9UM47 AL138880.2-201ENST00000616214 239 ntBASIC1.92□□□□□ -2.1
NOTCH3Q9UM47 AC004925.1-201ENST00000624256 2706 ntBASIC1.92□□□□□ -2.1
NOTCH3Q9UM47 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC1.92□□□□□ -2.1
NOTCH3Q9UM47 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
NOTCH3Q9UM47 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
NOTCH3Q9UM47 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC1.92□□□□□ -2.1
NOTCH3Q9UM47 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
NOTCH3Q9UM47 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC1.92□□□□□ -2.1
NOTCH3Q9UM47 MIR518C-201ENST00000384822 101 ntBASIC1.92□□□□□ -2.1
NOTCH3Q9UM47 FTH1P15-201ENST00000406984 280 ntBASIC1.92□□□□□ -2.1
NOTCH3Q9UM47 Y_RNA.617-201ENST00000410920 90 ntBASIC1.92□□□□□ -2.1
NOTCH3Q9UM47 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC1.92□□□□□ -2.1
NOTCH3Q9UM47 AC096649.2-201ENST00000416186 393 ntBASIC1.92□□□□□ -2.1
NOTCH3Q9UM47 AC016632.1-201ENST00000503994 196 ntBASIC1.92□□□□□ -2.1
NOTCH3Q9UM47 SNORA31.16-201ENST00000516773 139 ntBASIC1.92□□□□□ -2.1
NOTCH3Q9UM47 AP001328.1-201ENST00000528550 176 ntBASIC1.92□□□□□ -2.1
NOTCH3Q9UM47 AL031274.2-201ENST00000599419 203 ntBASIC1.92□□□□□ -2.1
NOTCH3Q9UM47 AL356575.1-201ENST00000603008 283 ntBASIC1.92□□□□□ -2.1
NOTCH3Q9UM47 DLEU2_6.1-201ENST00000610536 112 ntBASIC1.92□□□□□ -2.1
NOTCH3Q9UM47 U4.3-201ENST00000621047 82 ntBASIC1.92□□□□□ -2.1
NOTCH3Q9UM47 MIR3674-201ENST00000636576 68 ntBASIC1.92□□□□□ -2.1
NOTCH3Q9UM47 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC1.92□□□□□ -2.1
NOTCH3Q9UM47 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC1.92□□□□□ -2.1
NOTCH3Q9UM47 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC1.92□□□□□ -2.1
NOTCH3Q9UM47 AC092268.1-201ENST00000342691 405 ntBASIC1.91□□□□□ -2.1
NOTCH3Q9UM47 Y_RNA.456-201ENST00000384232 111 ntBASIC1.91□□□□□ -2.1
NOTCH3Q9UM47 MIR499A-201ENST00000384903 122 ntBASIC1.91□□□□□ -2.1
NOTCH3Q9UM47 SNORA12.1-201ENST00000390873 148 ntBASIC1.91□□□□□ -2.1
NOTCH3Q9UM47 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.91□□□□□ -2.1
NOTCH3Q9UM47 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC1.91□□□□□ -2.1
NOTCH3Q9UM47 AC079780.1-201ENST00000428259 207 ntBASIC1.91□□□□□ -2.1
NOTCH3Q9UM47 AC009969.1-201ENST00000438726 172 ntBASIC1.91□□□□□ -2.1
NOTCH3Q9UM47 RNA5SP61-201ENST00000516453 100 ntBASIC1.91□□□□□ -2.1
NOTCH3Q9UM47 RNU2-12P-201ENST00000517216 168 ntBASIC1.91□□□□□ -2.1
NOTCH3Q9UM47 MIR5688-201ENST00000580619 83 ntBASIC1.91□□□□□ -2.1
NOTCH3Q9UM47 TCL6_2.1-201ENST00000615162 119 ntBASIC1.91□□□□□ -2.1
NOTCH3Q9UM47 U6.95-201ENST00000636931 70 ntBASIC1.91□□□□□ -2.1
NOTCH3Q9UM47 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
NOTCH3Q9UM47 Y_RNA.49-201ENST00000362714 112 ntBASIC1.91□□□□□ -2.1
NOTCH3Q9UM47 SNORD56.1-201ENST00000362913 68 ntBASIC1.91□□□□□ -2.1
NOTCH3Q9UM47 SNORD114-26-201ENST00000363543 72 ntBASIC1.91□□□□□ -2.1
NOTCH3Q9UM47 RNU1-73P-201ENST00000383971 164 ntBASIC1.91□□□□□ -2.1
NOTCH3Q9UM47 RNU6-905P-201ENST00000384434 107 ntBASIC1.91□□□□□ -2.1
NOTCH3Q9UM47 Y_RNA.495-201ENST00000384435 112 ntBASIC1.91□□□□□ -2.1
NOTCH3Q9UM47 AL591034.1-201ENST00000407447 340 ntBASIC1.91□□□□□ -2.1
NOTCH3Q9UM47 AL159169.1-201ENST00000421119 127 ntBASIC1.91□□□□□ -2.1
NOTCH3Q9UM47 HSPE1P21-201ENST00000438283 308 ntBASIC1.91□□□□□ -2.1
NOTCH3Q9UM47 AC007969.2-201ENST00000441891 191 ntBASIC1.91□□□□□ -2.1
NOTCH3Q9UM47 AC006026.2-201ENST00000457376 180 ntBASIC1.91□□□□□ -2.1
NOTCH3Q9UM47 RNU6-412P-201ENST00000516434 106 ntBASIC1.91□□□□□ -2.1
NOTCH3Q9UM47 IGKV1-22-201ENST00000524313 326 ntBASIC1.91□□□□□ -2.1
NOTCH3Q9UM47 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms