Protein–RNA interactions for Protein: Q9UKV5

AMFR, E3 ubiquitin-protein ligase AMFR, humanhuman

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMFRQ9UKV5 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.42□□□□□ -2.02
AMFRQ9UKV5 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.42□□□□□ -2.02
AMFRQ9UKV5 AC006023.1-201ENST00000603944 259 ntBASIC2.42□□□□□ -2.02
AMFRQ9UKV5 AC025754.2-201ENST00000606491 432 ntBASIC2.42□□□□□ -2.02
AMFRQ9UKV5 MIR6817-201ENST00000615588 66 ntBASIC2.42□□□□□ -2.02
AMFRQ9UKV5 MIR6766-201ENST00000622641 72 ntBASIC2.42□□□□□ -2.02
AMFRQ9UKV5 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
AMFRQ9UKV5 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
AMFRQ9UKV5 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.41□□□□□ -2.02
AMFRQ9UKV5 Y_RNA.76-201ENST00000362931 109 ntBASIC2.41□□□□□ -2.02
AMFRQ9UKV5 Y_RNA.117-201ENST00000363294 101 ntBASIC2.41□□□□□ -2.02
AMFRQ9UKV5 Y_RNA.275-201ENST00000364726 110 ntBASIC2.41□□□□□ -2.02
AMFRQ9UKV5 Y_RNA.515-201ENST00000384535 112 ntBASIC2.41□□□□□ -2.02
AMFRQ9UKV5 AL031003.1-201ENST00000404229 172 ntBASIC2.41□□□□□ -2.02
AMFRQ9UKV5 AL357139.1-201ENST00000407792 426 ntBASIC2.41□□□□□ -2.02
AMFRQ9UKV5 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.41□□□□□ -2.02
AMFRQ9UKV5 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.41□□□□□ -2.02
AMFRQ9UKV5 RNA5SP24-201ENST00000516478 95 ntBASIC2.41□□□□□ -2.02
AMFRQ9UKV5 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.41□□□□□ -2.02
AMFRQ9UKV5 MIR5007-201ENST00000583098 95 ntBASIC2.41□□□□□ -2.02
AMFRQ9UKV5 AL512605.2-201ENST00000592972 256 ntBASIC2.41□□□□□ -2.02
AMFRQ9UKV5 AC046143.2-201ENST00000609789 160 ntBASIC2.41□□□□□ -2.02
AMFRQ9UKV5 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
AMFRQ9UKV5 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
AMFRQ9UKV5 RNU6-662P-201ENST00000384253 104 ntBASIC2.4□□□□□ -2.03
AMFRQ9UKV5 RNU6-57P-201ENST00000411348 103 ntBASIC2.4□□□□□ -2.03
AMFRQ9UKV5 AC114982.1-201ENST00000469402 321 ntBASIC2.4□□□□□ -2.03
AMFRQ9UKV5 AC234781.5-201ENST00000508429 271 ntBASIC2.4□□□□□ -2.03
AMFRQ9UKV5 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.4□□□□□ -2.03
AMFRQ9UKV5 RNU6-667P-201ENST00000517186 102 ntBASIC2.4□□□□□ -2.03
AMFRQ9UKV5 AC009779.6-201ENST00000603972 165 ntBASIC2.4□□□□□ -2.03
AMFRQ9UKV5 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.4□□□□□ -2.03
AMFRQ9UKV5 snoZ196.1-201ENST00000625269 89 ntBASIC2.4□□□□□ -2.03
AMFRQ9UKV5 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.4□□□□□ -2.03
AMFRQ9UKV5 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.4□□□□□ -2.03
AMFRQ9UKV5 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
AMFRQ9UKV5 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
AMFRQ9UKV5 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
AMFRQ9UKV5 AL136360.1-201ENST00000503377 1900 ntBASIC2.39□□□□□ -2.03
AMFRQ9UKV5 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
AMFRQ9UKV5 UBE2WP1-201ENST00000362030 340 ntBASIC2.39□□□□□ -2.03
AMFRQ9UKV5 Y_RNA.111-201ENST00000363248 100 ntBASIC2.39□□□□□ -2.03
AMFRQ9UKV5 SNORA25B-201ENST00000365507 128 ntBASIC2.39□□□□□ -2.03
AMFRQ9UKV5 MT-TR-201ENST00000387439 65 ntBASIC2.39□□□□□ -2.03
AMFRQ9UKV5 AC007064.1-201ENST00000412238 351 ntBASIC2.39□□□□□ -2.03
AMFRQ9UKV5 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.39□□□□□ -2.03
AMFRQ9UKV5 AC074290.1-201ENST00000448883 135 ntBASIC2.39□□□□□ -2.03
AMFRQ9UKV5 AL137159.1-201ENST00000452808 512 ntBASIC2.39□□□□□ -2.03
AMFRQ9UKV5 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.39□□□□□ -2.03
AMFRQ9UKV5 AC093259.1-201ENST00000509755 300 ntBASIC2.39□□□□□ -2.03
AMFRQ9UKV5 RNU4-71P-201ENST00000516258 113 ntBASIC2.39□□□□□ -2.03
AMFRQ9UKV5 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.39□□□□□ -2.03
AMFRQ9UKV5 MIR3162-201ENST00000581818 82 ntBASIC2.39□□□□□ -2.03
AMFRQ9UKV5 AL162424.1-201ENST00000602325 221 ntBASIC2.39□□□□□ -2.03
AMFRQ9UKV5 AC005828.6-201ENST00000606610 232 ntBASIC2.39□□□□□ -2.03
AMFRQ9UKV5 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.39□□□□□ -2.03
AMFRQ9UKV5 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.39□□□□□ -2.03
AMFRQ9UKV5 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.39□□□□□ -2.03
AMFRQ9UKV5 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.39□□□□□ -2.03
AMFRQ9UKV5 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
AMFRQ9UKV5 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
AMFRQ9UKV5 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
AMFRQ9UKV5 Y_RNA.122-201ENST00000363331 96 ntBASIC2.38□□□□□ -2.03
AMFRQ9UKV5 RNY1-201ENST00000364228 113 ntBASIC2.38□□□□□ -2.03
AMFRQ9UKV5 SNORA67.1-201ENST00000364749 141 ntBASIC2.38□□□□□ -2.03
AMFRQ9UKV5 RNU6-1289P-201ENST00000384431 106 ntBASIC2.38□□□□□ -2.03
AMFRQ9UKV5 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.38□□□□□ -2.03
AMFRQ9UKV5 AC018634.1-201ENST00000437554 401 ntBASIC2.38□□□□□ -2.03
AMFRQ9UKV5 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.38□□□□□ -2.03
AMFRQ9UKV5 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
AMFRQ9UKV5 RNU6-221P-201ENST00000459541 99 ntBASIC2.38□□□□□ -2.03
AMFRQ9UKV5 AC010531.2-201ENST00000465012 153 ntBASIC2.38□□□□□ -2.03
AMFRQ9UKV5 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.38□□□□□ -2.03
AMFRQ9UKV5 RNU6-948P-201ENST00000516374 107 ntBASIC2.38□□□□□ -2.03
AMFRQ9UKV5 RNA5SP82-201ENST00000516707 92 ntBASIC2.38□□□□□ -2.03
AMFRQ9UKV5 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.38□□□□□ -2.03
AMFRQ9UKV5 AC130289.1-201ENST00000577321 73 ntBASIC2.38□□□□□ -2.03
AMFRQ9UKV5 AC013412.1-201ENST00000610687 192 ntBASIC2.38□□□□□ -2.03
AMFRQ9UKV5 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.37□□□□□ -2.03
AMFRQ9UKV5 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
AMFRQ9UKV5 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.37□□□□□ -2.03
AMFRQ9UKV5 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.37□□□□□ -2.03
AMFRQ9UKV5 MIR340-201ENST00000362125 95 ntBASIC2.37□□□□□ -2.03
AMFRQ9UKV5 Y_RNA.217-201ENST00000364214 105 ntBASIC2.37□□□□□ -2.03
AMFRQ9UKV5 Y_RNA.332-201ENST00000365271 113 ntBASIC2.37□□□□□ -2.03
AMFRQ9UKV5 Y_RNA.361-201ENST00000365515 120 ntBASIC2.37□□□□□ -2.03
AMFRQ9UKV5 AL355796.1-201ENST00000406706 323 ntBASIC2.37□□□□□ -2.03
AMFRQ9UKV5 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.37□□□□□ -2.03
AMFRQ9UKV5 AL139156.1-201ENST00000412785 841 ntBASIC2.37□□□□□ -2.03
AMFRQ9UKV5 AC123900.1-201ENST00000420390 96 ntBASIC2.37□□□□□ -2.03
AMFRQ9UKV5 MTCO1P44-201ENST00000441935 243 ntBASIC2.37□□□□□ -2.03
AMFRQ9UKV5 Y_RNA.641-201ENST00000459414 105 ntBASIC2.37□□□□□ -2.03
AMFRQ9UKV5 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.37□□□□□ -2.03
AMFRQ9UKV5 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
AMFRQ9UKV5 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.37□□□□□ -2.03
AMFRQ9UKV5 RNU6-138P-201ENST00000515952 107 ntBASIC2.37□□□□□ -2.03
AMFRQ9UKV5 SNORD116-28-201ENST00000516123 91 ntBASIC2.37□□□□□ -2.03
AMFRQ9UKV5 MIR6852-201ENST00000621699 66 ntBASIC2.37□□□□□ -2.03
AMFRQ9UKV5 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.37□□□□□ -2.03
AMFRQ9UKV5 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 172.1 ms