Protein–RNA interactions for Protein: Q9UHB6

LIMA1, LIM domain and actin-binding protein 1, humanhuman

Known RBP Predictions only

Length 759 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1Q9UHB6 RN7SKP192-201ENST00000411291 327 ntBASIC1.97□□□□□ -2.09
LIMA1Q9UHB6 AC113618.1-201ENST00000416747 285 ntBASIC1.97□□□□□ -2.09
LIMA1Q9UHB6 CST2P1-201ENST00000425770 87 ntBASIC1.97□□□□□ -2.09
LIMA1Q9UHB6 TOMM22P2-201ENST00000430735 237 ntBASIC1.97□□□□□ -2.09
LIMA1Q9UHB6 TRBV12-1-201ENST00000479785 344 ntBASIC1.97□□□□□ -2.09
LIMA1Q9UHB6 SNORA25.10-201ENST00000515926 124 ntBASIC1.97□□□□□ -2.09
LIMA1Q9UHB6 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.97□□□□□ -2.09
LIMA1Q9UHB6 AC022254.1-201ENST00000567857 235 ntBASIC1.97□□□□□ -2.09
LIMA1Q9UHB6 AC006600.1-201ENST00000572529 153 ntBASIC1.97□□□□□ -2.09
LIMA1Q9UHB6 AC024614.2-201ENST00000577584 372 ntBASIC1.97□□□□□ -2.09
LIMA1Q9UHB6 AC104695.3-201ENST00000604052 296 ntBASIC1.97□□□□□ -2.09
LIMA1Q9UHB6 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.97□□□□□ -2.09
LIMA1Q9UHB6 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.97□□□□□ -2.09
LIMA1Q9UHB6 U2.1-201ENST00000618978 145 ntBASIC1.97□□□□□ -2.09
LIMA1Q9UHB6 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.97□□□□□ -2.09
LIMA1Q9UHB6 AC005592.1-201ENST00000566527 1640 ntBASIC1.97□□□□□ -2.09
LIMA1Q9UHB6 Y_RNA.39-201ENST00000362620 98 ntBASIC1.96□□□□□ -2.1
LIMA1Q9UHB6 RNU6-1240P-201ENST00000365155 104 ntBASIC1.96□□□□□ -2.1
LIMA1Q9UHB6 MIR606-201ENST00000384851 96 ntBASIC1.96□□□□□ -2.1
LIMA1Q9UHB6 Y_RNA.605-201ENST00000410577 105 ntBASIC1.96□□□□□ -2.1
LIMA1Q9UHB6 ELOCP21-201ENST00000412558 336 ntBASIC1.96□□□□□ -2.1
LIMA1Q9UHB6 PCNPP5-201ENST00000452246 481 ntBASIC1.96□□□□□ -2.1
LIMA1Q9UHB6 AC074133.1-201ENST00000515696 183 ntBASIC1.96□□□□□ -2.1
LIMA1Q9UHB6 RNU6-475P-201ENST00000516073 104 ntBASIC1.96□□□□□ -2.1
LIMA1Q9UHB6 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.96□□□□□ -2.1
LIMA1Q9UHB6 AL360085.1-201ENST00000604713 532 ntBASIC1.96□□□□□ -2.1
LIMA1Q9UHB6 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.96□□□□□ -2.1
LIMA1Q9UHB6 Y_RNA.158-201ENST00000363651 101 ntBASIC1.95□□□□□ -2.1
LIMA1Q9UHB6 RNU6-1264P-201ENST00000383891 107 ntBASIC1.95□□□□□ -2.1
LIMA1Q9UHB6 RNU6-738P-201ENST00000384531 106 ntBASIC1.95□□□□□ -2.1
LIMA1Q9UHB6 RNU6-1160P-201ENST00000384546 104 ntBASIC1.95□□□□□ -2.1
LIMA1Q9UHB6 AL079342.1-201ENST00000401460 267 ntBASIC1.95□□□□□ -2.1
LIMA1Q9UHB6 SNORD12B-201ENST00000410433 91 ntBASIC1.95□□□□□ -2.1
LIMA1Q9UHB6 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.95□□□□□ -2.1
LIMA1Q9UHB6 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.95□□□□□ -2.1
LIMA1Q9UHB6 AC003989.2-201ENST00000440224 169 ntBASIC1.95□□□□□ -2.1
LIMA1Q9UHB6 AC010409.1-201ENST00000487382 476 ntBASIC1.95□□□□□ -2.1
LIMA1Q9UHB6 MRPS17P9-201ENST00000511924 393 ntBASIC1.95□□□□□ -2.1
LIMA1Q9UHB6 SNORA40.9-201ENST00000515895 93 ntBASIC1.95□□□□□ -2.1
LIMA1Q9UHB6 RNU6-911P-201ENST00000516523 104 ntBASIC1.95□□□□□ -2.1
LIMA1Q9UHB6 SNORA40.14-201ENST00000516543 86 ntBASIC1.95□□□□□ -2.1
LIMA1Q9UHB6 GNAI2P1-201ENST00000541815 315 ntBASIC1.95□□□□□ -2.1
LIMA1Q9UHB6 MIR4713-201ENST00000582691 75 ntBASIC1.95□□□□□ -2.1
LIMA1Q9UHB6 VN1R91P-201ENST00000594377 169 ntBASIC1.95□□□□□ -2.1
LIMA1Q9UHB6 AC012493.3-201ENST00000604494 112 ntBASIC1.95□□□□□ -2.1
LIMA1Q9UHB6 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.94□□□□□ -2.1
LIMA1Q9UHB6 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.94□□□□□ -2.1
LIMA1Q9UHB6 RNU6-1266P-201ENST00000362794 105 ntBASIC1.94□□□□□ -2.1
LIMA1Q9UHB6 RNU6-112P-201ENST00000363599 104 ntBASIC1.94□□□□□ -2.1
LIMA1Q9UHB6 RNU6-1019P-201ENST00000364424 107 ntBASIC1.94□□□□□ -2.1
LIMA1Q9UHB6 RNU6-450P-201ENST00000364654 107 ntBASIC1.94□□□□□ -2.1
LIMA1Q9UHB6 Y_RNA.287-201ENST00000364853 94 ntBASIC1.94□□□□□ -2.1
LIMA1Q9UHB6 Y_RNA.527-201ENST00000384573 102 ntBASIC1.94□□□□□ -2.1
LIMA1Q9UHB6 RNU6-417P-201ENST00000384712 107 ntBASIC1.94□□□□□ -2.1
LIMA1Q9UHB6 MIR9-3-201ENST00000385084 90 ntBASIC1.94□□□□□ -2.1
LIMA1Q9UHB6 MIR628-201ENST00000385229 95 ntBASIC1.94□□□□□ -2.1
LIMA1Q9UHB6 MIR676-201ENST00000390702 67 ntBASIC1.94□□□□□ -2.1
LIMA1Q9UHB6 AC245047.4-201ENST00000433189 144 ntBASIC1.94□□□□□ -2.1
LIMA1Q9UHB6 RNU6-625P-201ENST00000459412 107 ntBASIC1.94□□□□□ -2.1
LIMA1Q9UHB6 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.94□□□□□ -2.1
LIMA1Q9UHB6 AC018448.1-201ENST00000552843 316 ntBASIC1.94□□□□□ -2.1
LIMA1Q9UHB6 MIR4648-201ENST00000580107 72 ntBASIC1.94□□□□□ -2.1
LIMA1Q9UHB6 AL096840.1-201ENST00000603287 93 ntBASIC1.94□□□□□ -2.1
LIMA1Q9UHB6 AC010900.2-201ENST00000604508 210 ntBASIC1.94□□□□□ -2.1
LIMA1Q9UHB6 AC116312.1-201ENST00000606841 314 ntBASIC1.94□□□□□ -2.1
LIMA1Q9UHB6 SNORA33-201ENST00000363664 130 ntBASIC1.93□□□□□ -2.1
LIMA1Q9UHB6 RNU6-639P-201ENST00000384074 107 ntBASIC1.93□□□□□ -2.1
LIMA1Q9UHB6 RNY3P4-201ENST00000384428 101 ntBASIC1.93□□□□□ -2.1
LIMA1Q9UHB6 RNU6-823P-201ENST00000391042 103 ntBASIC1.93□□□□□ -2.1
LIMA1Q9UHB6 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.93□□□□□ -2.1
LIMA1Q9UHB6 MTND2P23-201ENST00000422990 651 ntBASIC1.93□□□□□ -2.1
LIMA1Q9UHB6 RPL23AP42-201ENST00000471152 471 ntBASIC1.93□□□□□ -2.1
LIMA1Q9UHB6 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.93□□□□□ -2.1
LIMA1Q9UHB6 AC010469.2-201ENST00000496412 480 ntBASIC1.93□□□□□ -2.1
LIMA1Q9UHB6 SNORA31.17-201ENST00000516953 127 ntBASIC1.93□□□□□ -2.1
LIMA1Q9UHB6 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.93□□□□□ -2.1
LIMA1Q9UHB6 AL442163.3-201ENST00000554110 156 ntBASIC1.93□□□□□ -2.1
LIMA1Q9UHB6 MIR3618-201ENST00000580330 88 ntBASIC1.93□□□□□ -2.1
LIMA1Q9UHB6 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
LIMA1Q9UHB6 Y_RNA.153-201ENST00000363615 91 ntBASIC1.92□□□□□ -2.1
LIMA1Q9UHB6 Y_RNA.162-201ENST00000363683 102 ntBASIC1.92□□□□□ -2.1
LIMA1Q9UHB6 SNORA72.2-201ENST00000365028 127 ntBASIC1.92□□□□□ -2.1
LIMA1Q9UHB6 Y_RNA.498-201ENST00000384460 102 ntBASIC1.92□□□□□ -2.1
LIMA1Q9UHB6 RNU6-296P-201ENST00000384608 107 ntBASIC1.92□□□□□ -2.1
LIMA1Q9UHB6 MIR515-2-201ENST00000384883 83 ntBASIC1.92□□□□□ -2.1
LIMA1Q9UHB6 MIR515-1-201ENST00000384884 83 ntBASIC1.92□□□□□ -2.1
LIMA1Q9UHB6 RNU6-985P-201ENST00000410182 104 ntBASIC1.92□□□□□ -2.1
LIMA1Q9UHB6 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.92□□□□□ -2.1
LIMA1Q9UHB6 AC040926.1-201ENST00000530195 238 ntBASIC1.92□□□□□ -2.1
LIMA1Q9UHB6 AC084364.2-201ENST00000546924 395 ntBASIC1.92□□□□□ -2.1
LIMA1Q9UHB6 HSBP1P1-201ENST00000555205 166 ntBASIC1.92□□□□□ -2.1
LIMA1Q9UHB6 AC110588.1-201ENST00000559699 137 ntBASIC1.92□□□□□ -2.1
LIMA1Q9UHB6 AC113195.1-201ENST00000579952 141 ntBASIC1.92□□□□□ -2.1
LIMA1Q9UHB6 AC006504.6-201ENST00000590142 199 ntBASIC1.92□□□□□ -2.1
LIMA1Q9UHB6 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.92□□□□□ -2.1
LIMA1Q9UHB6 AC010615.1-201ENST00000594254 1764 ntBASIC1.92□□□□□ -2.1
LIMA1Q9UHB6 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.92□□□□□ -2.1
LIMA1Q9UHB6 RNA5SP126-201ENST00000365092 109 ntBASIC1.91□□□□□ -2.1
LIMA1Q9UHB6 SNORA70B-201ENST00000384210 135 ntBASIC1.91□□□□□ -2.1
LIMA1Q9UHB6 MIR520A-201ENST00000384862 85 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 304 ms