Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 AC008134.1-201ENST00000420943 193 ntBASIC1.64□□□□□ -2.15
HACD3Q9P035 TOMM22P2-201ENST00000430735 237 ntBASIC1.64□□□□□ -2.15
HACD3Q9P035 AC010409.1-201ENST00000487382 476 ntBASIC1.64□□□□□ -2.15
HACD3Q9P035 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.64□□□□□ -2.15
HACD3Q9P035 Y_RNA.661-201ENST00000516003 99 ntBASIC1.64□□□□□ -2.15
HACD3Q9P035 AP002001.1-203ENST00000534002 267 ntBASIC1.64□□□□□ -2.15
HACD3Q9P035 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.64□□□□□ -2.15
HACD3Q9P035 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.64□□□□□ -2.15
HACD3Q9P035 AC092447.9-201ENST00000603395 144 ntBASIC1.64□□□□□ -2.15
HACD3Q9P035 AC010900.2-201ENST00000604508 210 ntBASIC1.64□□□□□ -2.15
HACD3Q9P035 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.64□□□□□ -2.15
HACD3Q9P035 MIR369-201ENST00000362155 70 ntBASIC1.63□□□□□ -2.15
HACD3Q9P035 MIR410-201ENST00000362222 80 ntBASIC1.63□□□□□ -2.15
HACD3Q9P035 Y_RNA.112-201ENST00000363250 102 ntBASIC1.63□□□□□ -2.15
HACD3Q9P035 SNORA33-201ENST00000363664 130 ntBASIC1.63□□□□□ -2.15
HACD3Q9P035 Y_RNA.394-201ENST00000383942 103 ntBASIC1.63□□□□□ -2.15
HACD3Q9P035 Y_RNA.535-201ENST00000384612 99 ntBASIC1.63□□□□□ -2.15
HACD3Q9P035 RNU6-417P-201ENST00000384712 107 ntBASIC1.63□□□□□ -2.15
HACD3Q9P035 MIR504-201ENST00000385065 83 ntBASIC1.63□□□□□ -2.15
HACD3Q9P035 RN7SKP101-201ENST00000411376 320 ntBASIC1.63□□□□□ -2.15
HACD3Q9P035 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.63□□□□□ -2.15
HACD3Q9P035 CST2P1-201ENST00000425770 87 ntBASIC1.63□□□□□ -2.15
HACD3Q9P035 AC245047.4-201ENST00000433189 144 ntBASIC1.63□□□□□ -2.15
HACD3Q9P035 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.63□□□□□ -2.15
HACD3Q9P035 AL137792.2-201ENST00000443484 235 ntBASIC1.63□□□□□ -2.15
HACD3Q9P035 Y_RNA.639-201ENST00000458981 102 ntBASIC1.63□□□□□ -2.15
HACD3Q9P035 AC008834.1-201ENST00000511612 175 ntBASIC1.63□□□□□ -2.15
HACD3Q9P035 RNU6-1170P-201ENST00000515974 106 ntBASIC1.63□□□□□ -2.15
HACD3Q9P035 RNU4-77P-201ENST00000516692 156 ntBASIC1.63□□□□□ -2.15
HACD3Q9P035 AC006600.1-201ENST00000572529 153 ntBASIC1.63□□□□□ -2.15
HACD3Q9P035 VN1R91P-201ENST00000594377 169 ntBASIC1.63□□□□□ -2.15
HACD3Q9P035 uc_338.22-201ENST00000622722 187 ntBASIC1.63□□□□□ -2.15
HACD3Q9P035 RNU6-797P-201ENST00000363101 109 ntBASIC1.62□□□□□ -2.15
HACD3Q9P035 RNU6-112P-201ENST00000363599 104 ntBASIC1.62□□□□□ -2.15
HACD3Q9P035 RNU1-115P-201ENST00000365329 160 ntBASIC1.62□□□□□ -2.15
HACD3Q9P035 RNY1P14-201ENST00000384426 108 ntBASIC1.62□□□□□ -2.15
HACD3Q9P035 Y_RNA.498-201ENST00000384460 102 ntBASIC1.62□□□□□ -2.15
HACD3Q9P035 RNU6-296P-201ENST00000384608 107 ntBASIC1.62□□□□□ -2.15
HACD3Q9P035 CYCSP49-201ENST00000420810 319 ntBASIC1.62□□□□□ -2.15
HACD3Q9P035 RAB28P5-201ENST00000427490 651 ntBASIC1.62□□□□□ -2.15
HACD3Q9P035 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.62□□□□□ -2.15
HACD3Q9P035 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.62□□□□□ -2.15
HACD3Q9P035 RNU6-625P-201ENST00000459412 107 ntBASIC1.62□□□□□ -2.15
HACD3Q9P035 RPL26P26-201ENST00000480251 434 ntBASIC1.62□□□□□ -2.15
HACD3Q9P035 RNU6-1146P-201ENST00000516282 102 ntBASIC1.62□□□□□ -2.15
HACD3Q9P035 RNU6-548P-201ENST00000517083 115 ntBASIC1.62□□□□□ -2.15
HACD3Q9P035 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.62□□□□□ -2.15
HACD3Q9P035 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.62□□□□□ -2.15
HACD3Q9P035 AC084364.2-201ENST00000546924 395 ntBASIC1.62□□□□□ -2.15
HACD3Q9P035 AC069114.2-201ENST00000604699 304 ntBASIC1.62□□□□□ -2.15
HACD3Q9P035 AL160413.1-201ENST00000622780 310 ntBASIC1.62□□□□□ -2.15
HACD3Q9P035 MTND4P29-201ENST00000503122 1372 ntBASIC1.61□□□□□ -2.15
HACD3Q9P035 RNU6-961P-201ENST00000363893 105 ntBASIC1.61□□□□□ -2.15
HACD3Q9P035 RNU6-926P-201ENST00000384075 107 ntBASIC1.61□□□□□ -2.15
HACD3Q9P035 MIR628-201ENST00000385229 95 ntBASIC1.61□□□□□ -2.15
HACD3Q9P035 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
HACD3Q9P035 RNA5SP467-201ENST00000391274 118 ntBASIC1.61□□□□□ -2.15
HACD3Q9P035 MIR1253-201ENST00000408273 105 ntBASIC1.61□□□□□ -2.15
HACD3Q9P035 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.61□□□□□ -2.15
HACD3Q9P035 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.61□□□□□ -2.15
HACD3Q9P035 HMGN2P23-201ENST00000456759 269 ntBASIC1.61□□□□□ -2.15
HACD3Q9P035 SNORD65B-201ENST00000459126 73 ntBASIC1.61□□□□□ -2.15
HACD3Q9P035 HMGN1P13-201ENST00000505795 138 ntBASIC1.61□□□□□ -2.15
HACD3Q9P035 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.61□□□□□ -2.15
HACD3Q9P035 RNU6-1012P-201ENST00000516606 109 ntBASIC1.61□□□□□ -2.15
HACD3Q9P035 MIR4285-201ENST00000581001 85 ntBASIC1.61□□□□□ -2.15
HACD3Q9P035 MIR5188-201ENST00000583467 113 ntBASIC1.61□□□□□ -2.15
HACD3Q9P035 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.61□□□□□ -2.15
HACD3Q9P035 SNORD58B-201ENST00000607313 66 ntBASIC1.61□□□□□ -2.15
HACD3Q9P035 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.61□□□□□ -2.15
HACD3Q9P035 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
HACD3Q9P035 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
HACD3Q9P035 Y_RNA.27-201ENST00000362540 103 ntBASIC1.6□□□□□ -2.15
HACD3Q9P035 Y_RNA.39-201ENST00000362620 98 ntBASIC1.6□□□□□ -2.15
HACD3Q9P035 Y_RNA.80-201ENST00000362996 102 ntBASIC1.6□□□□□ -2.15
HACD3Q9P035 RNU6-454P-201ENST00000364292 107 ntBASIC1.6□□□□□ -2.15
HACD3Q9P035 RNU6-1019P-201ENST00000364424 107 ntBASIC1.6□□□□□ -2.15
HACD3Q9P035 RNU6-439P-201ENST00000384188 106 ntBASIC1.6□□□□□ -2.15
HACD3Q9P035 Y_RNA.460-201ENST00000384255 102 ntBASIC1.6□□□□□ -2.15
HACD3Q9P035 Y_RNA.485-201ENST00000384395 102 ntBASIC1.6□□□□□ -2.15
HACD3Q9P035 MIR934-201ENST00000401241 83 ntBASIC1.6□□□□□ -2.15
HACD3Q9P035 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.6□□□□□ -2.15
HACD3Q9P035 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.6□□□□□ -2.15
HACD3Q9P035 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.6□□□□□ -2.15
HACD3Q9P035 FCF1P4-201ENST00000448326 183 ntBASIC1.6□□□□□ -2.15
HACD3Q9P035 AC010469.2-201ENST00000496412 480 ntBASIC1.6□□□□□ -2.15
HACD3Q9P035 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.6□□□□□ -2.15
HACD3Q9P035 RNU6-408P-201ENST00000515910 100 ntBASIC1.6□□□□□ -2.15
HACD3Q9P035 SNORA31.17-201ENST00000516953 127 ntBASIC1.6□□□□□ -2.15
HACD3Q9P035 MIR3198-2-201ENST00000577868 80 ntBASIC1.6□□□□□ -2.15
HACD3Q9P035 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.6□□□□□ -2.15
HACD3Q9P035 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.6□□□□□ -2.15
HACD3Q9P035 AC007485.1-201ENST00000616755 206 ntBASIC1.6□□□□□ -2.15
HACD3Q9P035 AC090971.5-201ENST00000621102 293 ntBASIC1.6□□□□□ -2.15
HACD3Q9P035 AC090574.1-201ENST00000623186 233 ntBASIC1.6□□□□□ -2.15
HACD3Q9P035 AL606534.2-204ENST00000635008 178 ntBASIC1.6□□□□□ -2.15
HACD3Q9P035 U6.92-201ENST00000636464 89 ntBASIC1.6□□□□□ -2.15
HACD3Q9P035 MIR3674-201ENST00000636576 68 ntBASIC1.6□□□□□ -2.15
HACD3Q9P035 U6.108-201ENST00000637764 58 ntBASIC1.6□□□□□ -2.15
HACD3Q9P035 AC010615.1-201ENST00000594254 1764 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms