Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.72□□□□□ -2.13
NDE1Q9NXR1 RPL26P26-201ENST00000480251 434 ntBASIC1.72□□□□□ -2.13
NDE1Q9NXR1 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.72□□□□□ -2.13
NDE1Q9NXR1 SCARNA15.1-201ENST00000516384 125 ntBASIC1.72□□□□□ -2.13
NDE1Q9NXR1 AP005660.1-201ENST00000522972 293 ntBASIC1.72□□□□□ -2.13
NDE1Q9NXR1 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.72□□□□□ -2.13
NDE1Q9NXR1 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.72□□□□□ -2.13
NDE1Q9NXR1 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.72□□□□□ -2.13
NDE1Q9NXR1 LINC02555-201ENST00000563933 1951 ntBASIC1.72□□□□□ -2.13
NDE1Q9NXR1 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.71□□□□□ -2.14
NDE1Q9NXR1 Y_RNA.99-201ENST00000363138 105 ntBASIC1.71□□□□□ -2.14
NDE1Q9NXR1 Y_RNA.498-201ENST00000384460 102 ntBASIC1.71□□□□□ -2.14
NDE1Q9NXR1 MIR606-201ENST00000384851 96 ntBASIC1.71□□□□□ -2.14
NDE1Q9NXR1 MIR597-201ENST00000384968 97 ntBASIC1.71□□□□□ -2.14
NDE1Q9NXR1 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.71□□□□□ -2.14
NDE1Q9NXR1 SDAD1P3-201ENST00000427380 333 ntBASIC1.71□□□□□ -2.14
NDE1Q9NXR1 AL591806.2-201ENST00000433122 173 ntBASIC1.71□□□□□ -2.14
NDE1Q9NXR1 RNA5SP137-201ENST00000516833 135 ntBASIC1.71□□□□□ -2.14
NDE1Q9NXR1 Y_RNA.715-201ENST00000517082 110 ntBASIC1.71□□□□□ -2.14
NDE1Q9NXR1 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.71□□□□□ -2.14
NDE1Q9NXR1 AC015712.3-201ENST00000559380 164 ntBASIC1.71□□□□□ -2.14
NDE1Q9NXR1 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.71□□□□□ -2.14
NDE1Q9NXR1 AC113195.1-201ENST00000579952 141 ntBASIC1.71□□□□□ -2.14
NDE1Q9NXR1 RAC1P9-201ENST00000604990 392 ntBASIC1.71□□□□□ -2.14
NDE1Q9NXR1 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.71□□□□□ -2.14
NDE1Q9NXR1 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.71□□□□□ -2.14
NDE1Q9NXR1 AC006001.4-201ENST00000622243 395 ntBASIC1.71□□□□□ -2.14
NDE1Q9NXR1 AC130454.1-201ENST00000622948 401 ntBASIC1.71□□□□□ -2.14
NDE1Q9NXR1 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
NDE1Q9NXR1 RNU4-50P-201ENST00000364361 141 ntBASIC1.7□□□□□ -2.14
NDE1Q9NXR1 Y_RNA.455-201ENST00000384230 98 ntBASIC1.7□□□□□ -2.14
NDE1Q9NXR1 RNU6-160P-201ENST00000384591 107 ntBASIC1.7□□□□□ -2.14
NDE1Q9NXR1 HMGN2P39-201ENST00000398005 273 ntBASIC1.7□□□□□ -2.14
NDE1Q9NXR1 AL023284.1-201ENST00000403956 276 ntBASIC1.7□□□□□ -2.14
NDE1Q9NXR1 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.7□□□□□ -2.14
NDE1Q9NXR1 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.7□□□□□ -2.14
NDE1Q9NXR1 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.7□□□□□ -2.14
NDE1Q9NXR1 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.7□□□□□ -2.14
NDE1Q9NXR1 AC114982.1-201ENST00000469402 321 ntBASIC1.7□□□□□ -2.14
NDE1Q9NXR1 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.7□□□□□ -2.14
NDE1Q9NXR1 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.7□□□□□ -2.14
NDE1Q9NXR1 snoZ196.1-201ENST00000625269 89 ntBASIC1.7□□□□□ -2.14
NDE1Q9NXR1 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.7□□□□□ -2.14
NDE1Q9NXR1 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.69□□□□□ -2.14
NDE1Q9NXR1 RNU6-23P-201ENST00000363283 107 ntBASIC1.69□□□□□ -2.14
NDE1Q9NXR1 Y_RNA.143-201ENST00000363520 106 ntBASIC1.69□□□□□ -2.14
NDE1Q9NXR1 Y_RNA.153-201ENST00000363615 91 ntBASIC1.69□□□□□ -2.14
NDE1Q9NXR1 U3.8-201ENST00000363675 217 ntBASIC1.69□□□□□ -2.14
NDE1Q9NXR1 RNA5SP493-201ENST00000364115 91 ntBASIC1.69□□□□□ -2.14
NDE1Q9NXR1 RNU6-20P-201ENST00000384106 107 ntBASIC1.69□□□□□ -2.14
NDE1Q9NXR1 MIR518A2-201ENST00000384966 87 ntBASIC1.69□□□□□ -2.14
NDE1Q9NXR1 RNU6-482P-201ENST00000391068 107 ntBASIC1.69□□□□□ -2.14
NDE1Q9NXR1 RN7SKP223-201ENST00000410582 62 ntBASIC1.69□□□□□ -2.14
NDE1Q9NXR1 AC016909.1-201ENST00000415916 166 ntBASIC1.69□□□□□ -2.14
NDE1Q9NXR1 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.69□□□□□ -2.14
NDE1Q9NXR1 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
NDE1Q9NXR1 U8.20-201ENST00000459445 131 ntBASIC1.69□□□□□ -2.14
NDE1Q9NXR1 MTATP8P1-201ENST00000467115 207 ntBASIC1.69□□□□□ -2.14
NDE1Q9NXR1 AC093852.1-201ENST00000503587 266 ntBASIC1.69□□□□□ -2.14
NDE1Q9NXR1 AC067942.3-201ENST00000512025 362 ntBASIC1.69□□□□□ -2.14
NDE1Q9NXR1 AC074133.1-201ENST00000515696 183 ntBASIC1.69□□□□□ -2.14
NDE1Q9NXR1 RNU6-764P-201ENST00000516396 105 ntBASIC1.69□□□□□ -2.14
NDE1Q9NXR1 RNU6-966P-201ENST00000516479 104 ntBASIC1.69□□□□□ -2.14
NDE1Q9NXR1 RNU6-1046P-201ENST00000516538 107 ntBASIC1.69□□□□□ -2.14
NDE1Q9NXR1 AC027419.1-201ENST00000522976 328 ntBASIC1.69□□□□□ -2.14
NDE1Q9NXR1 AC022616.4-201ENST00000522985 181 ntBASIC1.69□□□□□ -2.14
NDE1Q9NXR1 AL442663.2-201ENST00000554385 511 ntBASIC1.69□□□□□ -2.14
NDE1Q9NXR1 MIR1273D-201ENST00000577266 86 ntBASIC1.69□□□□□ -2.14
NDE1Q9NXR1 AC006504.6-201ENST00000590142 199 ntBASIC1.69□□□□□ -2.14
NDE1Q9NXR1 AL360085.1-201ENST00000604713 532 ntBASIC1.69□□□□□ -2.14
NDE1Q9NXR1 AL121655.1-201ENST00000605811 308 ntBASIC1.69□□□□□ -2.14
NDE1Q9NXR1 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.69□□□□□ -2.14
NDE1Q9NXR1 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
NDE1Q9NXR1 AL159152.1-201ENST00000635019 2587 ntBASIC1.68□□□□□ -2.14
NDE1Q9NXR1 RNU6-626P-201ENST00000363354 107 ntBASIC1.68□□□□□ -2.14
NDE1Q9NXR1 RNU6-454P-201ENST00000364292 107 ntBASIC1.68□□□□□ -2.14
NDE1Q9NXR1 SNORA63C-201ENST00000364578 129 ntBASIC1.68□□□□□ -2.14
NDE1Q9NXR1 AC117470.1-201ENST00000381974 330 ntBASIC1.68□□□□□ -2.14
NDE1Q9NXR1 RNU6-1264P-201ENST00000383891 107 ntBASIC1.68□□□□□ -2.14
NDE1Q9NXR1 RNU6-937P-201ENST00000384325 106 ntBASIC1.68□□□□□ -2.14
NDE1Q9NXR1 RNU6-1160P-201ENST00000384546 104 ntBASIC1.68□□□□□ -2.14
NDE1Q9NXR1 RNU6-1235P-201ENST00000384559 107 ntBASIC1.68□□□□□ -2.14
NDE1Q9NXR1 SNORA64-201ENST00000384674 134 ntBASIC1.68□□□□□ -2.14
NDE1Q9NXR1 MIR1289-2-201ENST00000408360 111 ntBASIC1.68□□□□□ -2.14
NDE1Q9NXR1 MIR1283-2-201ENST00000408621 87 ntBASIC1.68□□□□□ -2.14
NDE1Q9NXR1 MIR1185-2-201ENST00000408687 86 ntBASIC1.68□□□□□ -2.14
NDE1Q9NXR1 RNU6-985P-201ENST00000410182 104 ntBASIC1.68□□□□□ -2.14
NDE1Q9NXR1 AL118496.2-201ENST00000448300 230 ntBASIC1.68□□□□□ -2.14
NDE1Q9NXR1 AC074290.1-201ENST00000448883 135 ntBASIC1.68□□□□□ -2.14
NDE1Q9NXR1 RNU6-498P-201ENST00000459468 107 ntBASIC1.68□□□□□ -2.14
NDE1Q9NXR1 RNU6-1041P-201ENST00000516254 102 ntBASIC1.68□□□□□ -2.14
NDE1Q9NXR1 RNU6-948P-201ENST00000516374 107 ntBASIC1.68□□□□□ -2.14
NDE1Q9NXR1 RNU6-548P-201ENST00000517083 115 ntBASIC1.68□□□□□ -2.14
NDE1Q9NXR1 AC131281.1-201ENST00000522984 164 ntBASIC1.68□□□□□ -2.14
NDE1Q9NXR1 AC087441.2-201ENST00000529141 262 ntBASIC1.68□□□□□ -2.14
NDE1Q9NXR1 CBX3P4-201ENST00000538909 354 ntBASIC1.68□□□□□ -2.14
NDE1Q9NXR1 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.68□□□□□ -2.14
NDE1Q9NXR1 MIR3169-201ENST00000578032 83 ntBASIC1.68□□□□□ -2.14
NDE1Q9NXR1 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.68□□□□□ -2.14
NDE1Q9NXR1 AC004467.1-201ENST00000615678 330 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms