Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 MIR4319-201ENST00000577285 85 ntBASIC2.11□□□□□ -2.07
LIN7CQ9NUP9 MIR4438-201ENST00000585271 93 ntBASIC2.11□□□□□ -2.07
LIN7CQ9NUP9 AC078899.2-201ENST00000595282 212 ntBASIC2.11□□□□□ -2.07
LIN7CQ9NUP9 AC006023.1-201ENST00000603944 259 ntBASIC2.11□□□□□ -2.07
LIN7CQ9NUP9 U6.73-201ENST00000619194 103 ntBASIC2.11□□□□□ -2.07
LIN7CQ9NUP9 CENPCP1-201ENST00000533085 2578 ntBASIC2.11□□□□□ -2.07
LIN7CQ9NUP9 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
LIN7CQ9NUP9 AC062016.1-201ENST00000355719 319 ntBASIC2.1□□□□□ -2.07
LIN7CQ9NUP9 snoU2_19.2-201ENST00000363024 80 ntBASIC2.1□□□□□ -2.07
LIN7CQ9NUP9 Y_RNA.176-201ENST00000363815 109 ntBASIC2.1□□□□□ -2.07
LIN7CQ9NUP9 RNU6-271P-201ENST00000363858 105 ntBASIC2.1□□□□□ -2.07
LIN7CQ9NUP9 RNU1-51P-201ENST00000365345 176 ntBASIC2.1□□□□□ -2.07
LIN7CQ9NUP9 RNU6-713P-201ENST00000384761 107 ntBASIC2.1□□□□□ -2.07
LIN7CQ9NUP9 MIR23A-201ENST00000385245 73 ntBASIC2.1□□□□□ -2.07
LIN7CQ9NUP9 Y_RNA.581-201ENST00000391017 97 ntBASIC2.1□□□□□ -2.07
LIN7CQ9NUP9 IPO7P1-201ENST00000442031 636 ntBASIC2.1□□□□□ -2.07
LIN7CQ9NUP9 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.1□□□□□ -2.07
LIN7CQ9NUP9 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.1□□□□□ -2.07
LIN7CQ9NUP9 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.1□□□□□ -2.07
LIN7CQ9NUP9 U1.36-201ENST00000620684 176 ntBASIC2.1□□□□□ -2.07
LIN7CQ9NUP9 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.1□□□□□ -2.07
LIN7CQ9NUP9 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
LIN7CQ9NUP9 AC010615.1-201ENST00000594254 1764 ntBASIC2.1□□□□□ -2.07
LIN7CQ9NUP9 ZNF702P-202ENST00000434269 1966 ntBASIC2.09□□□□□ -2.07
LIN7CQ9NUP9 Y_RNA.47-201ENST00000362697 108 ntBASIC2.09□□□□□ -2.07
LIN7CQ9NUP9 RNU4-90P-201ENST00000362773 141 ntBASIC2.09□□□□□ -2.07
LIN7CQ9NUP9 Y_RNA.133-201ENST00000363428 110 ntBASIC2.09□□□□□ -2.07
LIN7CQ9NUP9 Y_RNA.361-201ENST00000365515 120 ntBASIC2.09□□□□□ -2.07
LIN7CQ9NUP9 Y_RNA.383-201ENST00000383855 97 ntBASIC2.09□□□□□ -2.07
LIN7CQ9NUP9 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
LIN7CQ9NUP9 RNA5SP323-201ENST00000391094 133 ntBASIC2.09□□□□□ -2.07
LIN7CQ9NUP9 RNA5SP181-201ENST00000410246 98 ntBASIC2.09□□□□□ -2.07
LIN7CQ9NUP9 POLR2KP2-201ENST00000438155 177 ntBASIC2.09□□□□□ -2.07
LIN7CQ9NUP9 RPL23AP7-203ENST00000449021 469 ntBASIC2.09□□□□□ -2.07
LIN7CQ9NUP9 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.09□□□□□ -2.07
LIN7CQ9NUP9 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.09□□□□□ -2.07
LIN7CQ9NUP9 MIR3145-201ENST00000580727 82 ntBASIC2.09□□□□□ -2.07
LIN7CQ9NUP9 DEFB117-201ENST00000602356 141 ntBASIC2.09□□□□□ -2.07
LIN7CQ9NUP9 AL359075.3-201ENST00000613288 217 ntBASIC2.09□□□□□ -2.07
LIN7CQ9NUP9 SCARNA15.3-201ENST00000626315 122 ntBASIC2.09□□□□□ -2.07
LIN7CQ9NUP9 SCARNA4.1-201ENST00000628597 123 ntBASIC2.09□□□□□ -2.07
LIN7CQ9NUP9 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
LIN7CQ9NUP9 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.09□□□□□ -2.08
LIN7CQ9NUP9 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.09□□□□□ -2.08
LIN7CQ9NUP9 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
LIN7CQ9NUP9 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.08□□□□□ -2.08
LIN7CQ9NUP9 RNU6-505P-201ENST00000384427 107 ntBASIC2.08□□□□□ -2.08
LIN7CQ9NUP9 MIR196B-201ENST00000384852 84 ntBASIC2.08□□□□□ -2.08
LIN7CQ9NUP9 EBAG9P1-201ENST00000418955 543 ntBASIC2.08□□□□□ -2.08
LIN7CQ9NUP9 RPS26P55-201ENST00000471178 356 ntBASIC2.08□□□□□ -2.08
LIN7CQ9NUP9 AC010409.1-201ENST00000487382 476 ntBASIC2.08□□□□□ -2.08
LIN7CQ9NUP9 SNORA70.12-201ENST00000516084 153 ntBASIC2.08□□□□□ -2.08
LIN7CQ9NUP9 RNU1-142P-201ENST00000516682 145 ntBASIC2.08□□□□□ -2.08
LIN7CQ9NUP9 RNU6-570P-201ENST00000517051 105 ntBASIC2.08□□□□□ -2.08
LIN7CQ9NUP9 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.08□□□□□ -2.08
LIN7CQ9NUP9 AC069114.2-201ENST00000604699 304 ntBASIC2.08□□□□□ -2.08
LIN7CQ9NUP9 U6.108-201ENST00000637764 58 ntBASIC2.08□□□□□ -2.08
LIN7CQ9NUP9 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
LIN7CQ9NUP9 SNORD114-7-201ENST00000362520 77 ntBASIC2.07□□□□□ -2.08
LIN7CQ9NUP9 Y_RNA.84-201ENST00000363011 104 ntBASIC2.07□□□□□ -2.08
LIN7CQ9NUP9 Y_RNA.149-201ENST00000363558 117 ntBASIC2.07□□□□□ -2.08
LIN7CQ9NUP9 Y_RNA.541-201ENST00000384640 113 ntBASIC2.07□□□□□ -2.08
LIN7CQ9NUP9 MIR515-2-201ENST00000384883 83 ntBASIC2.07□□□□□ -2.08
LIN7CQ9NUP9 MIR515-1-201ENST00000384884 83 ntBASIC2.07□□□□□ -2.08
LIN7CQ9NUP9 RNU2-52P-201ENST00000410680 190 ntBASIC2.07□□□□□ -2.08
LIN7CQ9NUP9 RNU2-61P-201ENST00000411069 191 ntBASIC2.07□□□□□ -2.08
LIN7CQ9NUP9 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.07□□□□□ -2.08
LIN7CQ9NUP9 AC097462.1-201ENST00000514125 324 ntBASIC2.07□□□□□ -2.08
LIN7CQ9NUP9 RNU7-128P-201ENST00000517247 62 ntBASIC2.07□□□□□ -2.08
LIN7CQ9NUP9 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.07□□□□□ -2.08
LIN7CQ9NUP9 AC084364.2-201ENST00000546924 395 ntBASIC2.07□□□□□ -2.08
LIN7CQ9NUP9 AC005034.5-201ENST00000604219 466 ntBASIC2.07□□□□□ -2.08
LIN7CQ9NUP9 MIR6895-201ENST00000613497 78 ntBASIC2.07□□□□□ -2.08
LIN7CQ9NUP9 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
LIN7CQ9NUP9 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
LIN7CQ9NUP9 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
LIN7CQ9NUP9 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
LIN7CQ9NUP9 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
LIN7CQ9NUP9 RNU1-22P-201ENST00000363334 158 ntBASIC2.06□□□□□ -2.08
LIN7CQ9NUP9 Y_RNA.376-201ENST00000365638 108 ntBASIC2.06□□□□□ -2.08
LIN7CQ9NUP9 SNORA8-201ENST00000384574 139 ntBASIC2.06□□□□□ -2.08
LIN7CQ9NUP9 Y_RNA.569-201ENST00000384749 103 ntBASIC2.06□□□□□ -2.08
LIN7CQ9NUP9 AL355497.1-201ENST00000406262 551 ntBASIC2.06□□□□□ -2.08
LIN7CQ9NUP9 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.06□□□□□ -2.08
LIN7CQ9NUP9 AC245047.4-201ENST00000433189 144 ntBASIC2.06□□□□□ -2.08
LIN7CQ9NUP9 MTND3P2-201ENST00000438452 342 ntBASIC2.06□□□□□ -2.08
LIN7CQ9NUP9 AL163195.1-201ENST00000496941 348 ntBASIC2.06□□□□□ -2.08
LIN7CQ9NUP9 MTCO2P24-201ENST00000515611 426 ntBASIC2.06□□□□□ -2.08
LIN7CQ9NUP9 RNU7-99P-201ENST00000516271 62 ntBASIC2.06□□□□□ -2.08
LIN7CQ9NUP9 RNU7-172P-201ENST00000517125 64 ntBASIC2.06□□□□□ -2.08
LIN7CQ9NUP9 MYL12BP1-201ENST00000569826 507 ntBASIC2.06□□□□□ -2.08
LIN7CQ9NUP9 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.06□□□□□ -2.08
LIN7CQ9NUP9 U4.3-201ENST00000621047 82 ntBASIC2.06□□□□□ -2.08
LIN7CQ9NUP9 MIR8062-201ENST00000621515 85 ntBASIC2.06□□□□□ -2.08
LIN7CQ9NUP9 AC127459.3-201ENST00000624328 466 ntBASIC2.06□□□□□ -2.08
LIN7CQ9NUP9 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
LIN7CQ9NUP9 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
LIN7CQ9NUP9 AL356292.1-201ENST00000283110 373 ntBASIC2.05□□□□□ -2.08
LIN7CQ9NUP9 Y_RNA.16-201ENST00000362421 102 ntBASIC2.05□□□□□ -2.08
LIN7CQ9NUP9 RNA5SP456-201ENST00000364002 114 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms