Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 AC016717.2-201ENST00000609089 5141 ntBASIC2.61□□□□□ -1.99
TRMT13Q9NUP7 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
TRMT13Q9NUP7 RNU6-545P-201ENST00000362681 104 ntBASIC2.6□□□□□ -1.99
TRMT13Q9NUP7 SNORD27-201ENST00000363981 72 ntBASIC2.6□□□□□ -1.99
TRMT13Q9NUP7 RNU6-1175P-201ENST00000365200 107 ntBASIC2.6□□□□□ -1.99
TRMT13Q9NUP7 SNORD14D-201ENST00000384390 87 ntBASIC2.6□□□□□ -1.99
TRMT13Q9NUP7 Y_RNA.570-201ENST00000384750 101 ntBASIC2.6□□□□□ -1.99
TRMT13Q9NUP7 MIR29C-201ENST00000385231 88 ntBASIC2.6□□□□□ -1.99
TRMT13Q9NUP7 Y_RNA.581-201ENST00000391017 97 ntBASIC2.6□□□□□ -1.99
TRMT13Q9NUP7 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.6□□□□□ -1.99
TRMT13Q9NUP7 RPS12P2-201ENST00000439728 269 ntBASIC2.6□□□□□ -1.99
TRMT13Q9NUP7 HSPE1P25-201ENST00000455484 251 ntBASIC2.6□□□□□ -1.99
TRMT13Q9NUP7 AC074133.1-201ENST00000515696 183 ntBASIC2.6□□□□□ -1.99
TRMT13Q9NUP7 RNU7-110P-201ENST00000516891 62 ntBASIC2.6□□□□□ -1.99
TRMT13Q9NUP7 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.6□□□□□ -1.99
TRMT13Q9NUP7 MIR3670-2-201ENST00000582974 65 ntBASIC2.6□□□□□ -1.99
TRMT13Q9NUP7 MIR3670-1-201ENST00000584160 65 ntBASIC2.6□□□□□ -1.99
TRMT13Q9NUP7 MIR3670-3-201ENST00000584855 65 ntBASIC2.6□□□□□ -1.99
TRMT13Q9NUP7 AC005176.2-201ENST00000596933 147 ntBASIC2.6□□□□□ -1.99
TRMT13Q9NUP7 MIR3670-4-201ENST00000612260 65 ntBASIC2.6□□□□□ -1.99
TRMT13Q9NUP7 MIR6873-201ENST00000622788 63 ntBASIC2.6□□□□□ -1.99
TRMT13Q9NUP7 AC068205.3-201ENST00000636385 468 ntBASIC2.6□□□□□ -1.99
TRMT13Q9NUP7 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.59□□□□□ -1.99
TRMT13Q9NUP7 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
TRMT13Q9NUP7 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
TRMT13Q9NUP7 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -1.99
TRMT13Q9NUP7 Y_RNA.20-201ENST00000362479 113 ntBASIC2.59□□□□□ -1.99
TRMT13Q9NUP7 Y_RNA.99-201ENST00000363138 105 ntBASIC2.59□□□□□ -1.99
TRMT13Q9NUP7 Y_RNA.101-201ENST00000363154 102 ntBASIC2.59□□□□□ -1.99
TRMT13Q9NUP7 RNA5SP99-201ENST00000364020 114 ntBASIC2.59□□□□□ -1.99
TRMT13Q9NUP7 Y_RNA.416-201ENST00000384014 113 ntBASIC2.59□□□□□ -1.99
TRMT13Q9NUP7 Y_RNA.462-201ENST00000384268 102 ntBASIC2.59□□□□□ -1.99
TRMT13Q9NUP7 MTND5P15-201ENST00000434246 349 ntBASIC2.59□□□□□ -1.99
TRMT13Q9NUP7 CYCSP23-201ENST00000519781 313 ntBASIC2.59□□□□□ -1.99
TRMT13Q9NUP7 DEFB108E-201ENST00000524692 240 ntBASIC2.59□□□□□ -1.99
TRMT13Q9NUP7 AL512605.2-201ENST00000592972 256 ntBASIC2.59□□□□□ -1.99
TRMT13Q9NUP7 AC004467.1-201ENST00000615678 330 ntBASIC2.59□□□□□ -1.99
TRMT13Q9NUP7 AC091932.3-201ENST00000624223 323 ntBASIC2.59□□□□□ -1.99
TRMT13Q9NUP7 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
TRMT13Q9NUP7 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.59□□□□□ -2
TRMT13Q9NUP7 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.59□□□□□ -2
TRMT13Q9NUP7 SNORD115-3-201ENST00000363100 82 ntBASIC2.58□□□□□ -2
TRMT13Q9NUP7 RNU6-1305P-201ENST00000364353 104 ntBASIC2.58□□□□□ -2
TRMT13Q9NUP7 SNORD31B-201ENST00000364977 69 ntBASIC2.58□□□□□ -2
TRMT13Q9NUP7 RNU4-70P-201ENST00000384579 139 ntBASIC2.58□□□□□ -2
TRMT13Q9NUP7 AL603910.2-201ENST00000407268 136 ntBASIC2.58□□□□□ -2
TRMT13Q9NUP7 RNU5A-5P-201ENST00000411054 116 ntBASIC2.58□□□□□ -2
TRMT13Q9NUP7 AC096920.1-201ENST00000423991 241 ntBASIC2.58□□□□□ -2
TRMT13Q9NUP7 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.58□□□□□ -2
TRMT13Q9NUP7 HMGB3P3-201ENST00000510526 400 ntBASIC2.58□□□□□ -2
TRMT13Q9NUP7 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.58□□□□□ -2
TRMT13Q9NUP7 AC009127.3-201ENST00000570531 403 ntBASIC2.58□□□□□ -2
TRMT13Q9NUP7 MIR4446-201ENST00000578505 67 ntBASIC2.58□□□□□ -2
TRMT13Q9NUP7 U6.104-201ENST00000637979 90 ntBASIC2.58□□□□□ -2
TRMT13Q9NUP7 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
TRMT13Q9NUP7 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.58□□□□□ -2
TRMT13Q9NUP7 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
TRMT13Q9NUP7 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
TRMT13Q9NUP7 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.57□□□□□ -2
TRMT13Q9NUP7 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.57□□□□□ -2
TRMT13Q9NUP7 AL391987.6-201ENST00000305671 199 ntBASIC2.57□□□□□ -2
TRMT13Q9NUP7 RNU6-200P-201ENST00000364743 107 ntBASIC2.57□□□□□ -2
TRMT13Q9NUP7 SNORA72.2-201ENST00000365028 127 ntBASIC2.57□□□□□ -2
TRMT13Q9NUP7 Y_RNA.478-201ENST00000384358 107 ntBASIC2.57□□□□□ -2
TRMT13Q9NUP7 Y_RNA.515-201ENST00000384535 112 ntBASIC2.57□□□□□ -2
TRMT13Q9NUP7 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.57□□□□□ -2
TRMT13Q9NUP7 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.57□□□□□ -2
TRMT13Q9NUP7 MIR300-201ENST00000401138 83 ntBASIC2.57□□□□□ -2
TRMT13Q9NUP7 MIR1262-201ENST00000408276 93 ntBASIC2.57□□□□□ -2
TRMT13Q9NUP7 AC011753.1-201ENST00000451001 220 ntBASIC2.57□□□□□ -2
TRMT13Q9NUP7 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.57□□□□□ -2
TRMT13Q9NUP7 RNU7-193P-201ENST00000516723 65 ntBASIC2.57□□□□□ -2
TRMT13Q9NUP7 SCARNA24.2-201ENST00000516968 130 ntBASIC2.57□□□□□ -2
TRMT13Q9NUP7 AC130289.1-201ENST00000577321 73 ntBASIC2.57□□□□□ -2
TRMT13Q9NUP7 MIR4643-201ENST00000577473 78 ntBASIC2.57□□□□□ -2
TRMT13Q9NUP7 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.57□□□□□ -2
TRMT13Q9NUP7 FO624990.1-201ENST00000636373 85 ntBASIC2.57□□□□□ -2
TRMT13Q9NUP7 MIR3674-201ENST00000636576 68 ntBASIC2.57□□□□□ -2
TRMT13Q9NUP7 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.57□□□□□ -2
TRMT13Q9NUP7 MIR335-201ENST00000362173 94 ntBASIC2.56□□□□□ -2
TRMT13Q9NUP7 RNU6-454P-201ENST00000364292 107 ntBASIC2.56□□□□□ -2
TRMT13Q9NUP7 SNORA64-201ENST00000384674 134 ntBASIC2.56□□□□□ -2
TRMT13Q9NUP7 RNU6-21P-201ENST00000384710 107 ntBASIC2.56□□□□□ -2
TRMT13Q9NUP7 MIR548B-201ENST00000385247 97 ntBASIC2.56□□□□□ -2
TRMT13Q9NUP7 SNORD23.1-201ENST00000408212 104 ntBASIC2.56□□□□□ -2
TRMT13Q9NUP7 AC123900.1-201ENST00000420390 96 ntBASIC2.56□□□□□ -2
TRMT13Q9NUP7 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.56□□□□□ -2
TRMT13Q9NUP7 HMGN2P9-201ENST00000476875 229 ntBASIC2.56□□□□□ -2
TRMT13Q9NUP7 RNU6-1338P-201ENST00000516328 91 ntBASIC2.56□□□□□ -2
TRMT13Q9NUP7 PRELID2P1-201ENST00000552837 301 ntBASIC2.56□□□□□ -2
TRMT13Q9NUP7 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.56□□□□□ -2
TRMT13Q9NUP7 MIR4529-201ENST00000578110 78 ntBASIC2.56□□□□□ -2
TRMT13Q9NUP7 MIR4753-201ENST00000585119 83 ntBASIC2.56□□□□□ -2
TRMT13Q9NUP7 AC078899.2-201ENST00000595282 212 ntBASIC2.56□□□□□ -2
TRMT13Q9NUP7 AC009779.6-201ENST00000603972 165 ntBASIC2.56□□□□□ -2
TRMT13Q9NUP7 SNORD113-5-201ENST00000607261 78 ntBASIC2.56□□□□□ -2
TRMT13Q9NUP7 MIR203B-201ENST00000636080 86 ntBASIC2.56□□□□□ -2
TRMT13Q9NUP7 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
TRMT13Q9NUP7 Y_RNA.65-201ENST00000362846 100 ntBASIC2.55□□□□□ -2
TRMT13Q9NUP7 SNORD81.1-201ENST00000363064 77 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 169.4 ms