Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 MIR373-201ENST00000362273 69 ntBASIC-0.06□□□□□ -2.42
CDC42SE1Q9NRR8 SNORD118-201ENST00000363593 134 ntBASIC-0.06□□□□□ -2.42
CDC42SE1Q9NRR8 RNU6-580P-201ENST00000365159 107 ntBASIC-0.06□□□□□ -2.42
CDC42SE1Q9NRR8 SNORA70B-201ENST00000384210 135 ntBASIC-0.06□□□□□ -2.42
CDC42SE1Q9NRR8 Y_RNA.560-201ENST00000384689 102 ntBASIC-0.06□□□□□ -2.42
CDC42SE1Q9NRR8 MIR520F-201ENST00000384824 87 ntBASIC-0.06□□□□□ -2.42
CDC42SE1Q9NRR8 MIR520H-201ENST00000385126 88 ntBASIC-0.06□□□□□ -2.42
CDC42SE1Q9NRR8 MIR136-201ENST00000385207 82 ntBASIC-0.06□□□□□ -2.42
CDC42SE1Q9NRR8 RNU6-1158P-201ENST00000391167 107 ntBASIC-0.06□□□□□ -2.42
CDC42SE1Q9NRR8 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-0.06□□□□□ -2.42
CDC42SE1Q9NRR8 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC-0.06□□□□□ -2.42
CDC42SE1Q9NRR8 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC-0.06□□□□□ -2.42
CDC42SE1Q9NRR8 RNU7-63P-201ENST00000459054 62 ntBASIC-0.06□□□□□ -2.42
CDC42SE1Q9NRR8 RPL30P10-201ENST00000488148 337 ntBASIC-0.06□□□□□ -2.42
CDC42SE1Q9NRR8 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC-0.06□□□□□ -2.42
CDC42SE1Q9NRR8 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-0.06□□□□□ -2.42
CDC42SE1Q9NRR8 RNU6-1038P-201ENST00000516516 104 ntBASIC-0.06□□□□□ -2.42
CDC42SE1Q9NRR8 SNORA18.7-201ENST00000516910 131 ntBASIC-0.06□□□□□ -2.42
CDC42SE1Q9NRR8 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC-0.06□□□□□ -2.42
CDC42SE1Q9NRR8 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC-0.06□□□□□ -2.42
CDC42SE1Q9NRR8 AC011604.1-201ENST00000545978 196 ntBASIC-0.06□□□□□ -2.42
CDC42SE1Q9NRR8 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC-0.06□□□□□ -2.42
CDC42SE1Q9NRR8 MIR3913-1-201ENST00000577744 102 ntBASIC-0.06□□□□□ -2.42
CDC42SE1Q9NRR8 AL357078.3-201ENST00000607528 618 ntBASIC-0.06□□□□□ -2.42
CDC42SE1Q9NRR8 AL136370.1-201ENST00000608166 691 ntBASIC-0.06□□□□□ -2.42
CDC42SE1Q9NRR8 FAM157A-202ENST00000615155 405 ntBASIC-0.06□□□□□ -2.42
CDC42SE1Q9NRR8 AC006504.8-201ENST00000621046 635 ntBASIC-0.06□□□□□ -2.42
CDC42SE1Q9NRR8 AC243829.3-201ENST00000622177 108 ntBASIC-0.06□□□□□ -2.42
CDC42SE1Q9NRR8 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC-0.07□□□□□ -2.42
CDC42SE1Q9NRR8 MIR378A-201ENST00000362177 66 ntBASIC-0.07□□□□□ -2.42
CDC42SE1Q9NRR8 SNORD113-7-201ENST00000363762 77 ntBASIC-0.07□□□□□ -2.42
CDC42SE1Q9NRR8 Y_RNA.179-201ENST00000363844 90 ntBASIC-0.07□□□□□ -2.42
CDC42SE1Q9NRR8 RNU6-280P-201ENST00000364145 104 ntBASIC-0.07□□□□□ -2.42
CDC42SE1Q9NRR8 RNU6-407P-201ENST00000365280 104 ntBASIC-0.07□□□□□ -2.42
CDC42SE1Q9NRR8 AL606923.1-201ENST00000406616 190 ntBASIC-0.07□□□□□ -2.42
CDC42SE1Q9NRR8 AC243428.1-201ENST00000421099 264 ntBASIC-0.07□□□□□ -2.42
CDC42SE1Q9NRR8 ELOCP24-201ENST00000456370 334 ntBASIC-0.07□□□□□ -2.42
CDC42SE1Q9NRR8 SNORD123-201ENST00000459473 70 ntBASIC-0.07□□□□□ -2.42
CDC42SE1Q9NRR8 SNORA25.12-201ENST00000516202 82 ntBASIC-0.07□□□□□ -2.42
CDC42SE1Q9NRR8 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC-0.07□□□□□ -2.42
CDC42SE1Q9NRR8 MIR4290-201ENST00000583807 95 ntBASIC-0.07□□□□□ -2.42
CDC42SE1Q9NRR8 AC092747.3-201ENST00000603769 301 ntBASIC-0.07□□□□□ -2.42
CDC42SE1Q9NRR8 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC-0.07□□□□□ -2.42
CDC42SE1Q9NRR8 AC022306.3-201ENST00000619930 550 ntBASIC-0.07□□□□□ -2.42
CDC42SE1Q9NRR8 5S_rRNA.13-201ENST00000622298 123 ntBASIC-0.07□□□□□ -2.42
CDC42SE1Q9NRR8 AC079248.2-201ENST00000623779 326 ntBASIC-0.07□□□□□ -2.42
CDC42SE1Q9NRR8 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-0.07□□□□□ -2.42
CDC42SE1Q9NRR8 FGF7P2-201ENST00000332473 296 ntBASIC-0.08□□□□□ -2.42
CDC42SE1Q9NRR8 SNORD114-16-201ENST00000363044 70 ntBASIC-0.08□□□□□ -2.42
CDC42SE1Q9NRR8 SNORD114-27-201ENST00000363766 70 ntBASIC-0.08□□□□□ -2.42
CDC42SE1Q9NRR8 RNU6-553P-201ENST00000364047 96 ntBASIC-0.08□□□□□ -2.42
CDC42SE1Q9NRR8 Y_RNA.378-201ENST00000365652 113 ntBASIC-0.08□□□□□ -2.42
CDC42SE1Q9NRR8 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC-0.08□□□□□ -2.42
CDC42SE1Q9NRR8 RNU6-38P-201ENST00000384085 107 ntBASIC-0.08□□□□□ -2.42
CDC42SE1Q9NRR8 MIR15B-201ENST00000385045 98 ntBASIC-0.08□□□□□ -2.42
CDC42SE1Q9NRR8 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-0.08□□□□□ -2.42
CDC42SE1Q9NRR8 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC-0.08□□□□□ -2.42
CDC42SE1Q9NRR8 snoU13.21-201ENST00000459368 105 ntBASIC-0.08□□□□□ -2.42
CDC42SE1Q9NRR8 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC-0.08□□□□□ -2.42
CDC42SE1Q9NRR8 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-0.08□□□□□ -2.42
CDC42SE1Q9NRR8 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.08□□□□□ -2.42
CDC42SE1Q9NRR8 CYP3A137P-201ENST00000562436 69 ntBASIC-0.08□□□□□ -2.42
CDC42SE1Q9NRR8 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-0.08□□□□□ -2.42
CDC42SE1Q9NRR8 MIR4700-201ENST00000578311 74 ntBASIC-0.08□□□□□ -2.42
CDC42SE1Q9NRR8 MIR3684-201ENST00000579779 74 ntBASIC-0.08□□□□□ -2.42
CDC42SE1Q9NRR8 SNORA4-201ENST00000584302 138 ntBASIC-0.08□□□□□ -2.42
CDC42SE1Q9NRR8 AC005828.6-201ENST00000606610 232 ntBASIC-0.08□□□□□ -2.42
CDC42SE1Q9NRR8 AF250324.2-201ENST00000608299 610 ntBASIC-0.08□□□□□ -2.42
CDC42SE1Q9NRR8 AL355073.2-201ENST00000612106 557 ntBASIC-0.08□□□□□ -2.42
CDC42SE1Q9NRR8 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC-0.08□□□□□ -2.42
CDC42SE1Q9NRR8 AL591926.4-201ENST00000616895 298 ntBASIC-0.08□□□□□ -2.42
CDC42SE1Q9NRR8 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.08□□□□□ -2.42
CDC42SE1Q9NRR8 SNORD68-201ENST00000363214 84 ntBASIC-0.09□□□□□ -2.42
CDC42SE1Q9NRR8 RNA5SP214-201ENST00000363378 118 ntBASIC-0.09□□□□□ -2.42
CDC42SE1Q9NRR8 SNORD45.3-201ENST00000363836 72 ntBASIC-0.09□□□□□ -2.42
CDC42SE1Q9NRR8 SNORA11.1-201ENST00000408133 129 ntBASIC-0.09□□□□□ -2.42
CDC42SE1Q9NRR8 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC-0.09□□□□□ -2.42
CDC42SE1Q9NRR8 RPL30P16-201ENST00000419341 429 ntBASIC-0.09□□□□□ -2.42
CDC42SE1Q9NRR8 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.09□□□□□ -2.42
CDC42SE1Q9NRR8 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-0.09□□□□□ -2.42
CDC42SE1Q9NRR8 AC073261.1-201ENST00000429409 121 ntBASIC-0.09□□□□□ -2.42
CDC42SE1Q9NRR8 AL358934.1-201ENST00000432346 324 ntBASIC-0.09□□□□□ -2.42
CDC42SE1Q9NRR8 AC244505.5-201ENST00000443639 207 ntBASIC-0.09□□□□□ -2.42
CDC42SE1Q9NRR8 RNU7-187P-201ENST00000458985 68 ntBASIC-0.09□□□□□ -2.42
CDC42SE1Q9NRR8 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-0.09□□□□□ -2.42
CDC42SE1Q9NRR8 SNORA19.2-201ENST00000516013 114 ntBASIC-0.09□□□□□ -2.42
CDC42SE1Q9NRR8 RNA5SP94-201ENST00000516917 108 ntBASIC-0.09□□□□□ -2.42
CDC42SE1Q9NRR8 AC060788.1-201ENST00000521318 469 ntBASIC-0.09□□□□□ -2.42
CDC42SE1Q9NRR8 AC093027.1-201ENST00000546698 429 ntBASIC-0.09□□□□□ -2.42
CDC42SE1Q9NRR8 MIR4667-201ENST00000578933 66 ntBASIC-0.09□□□□□ -2.42
CDC42SE1Q9NRR8 MIR4714-201ENST00000580728 77 ntBASIC-0.09□□□□□ -2.42
CDC42SE1Q9NRR8 SNORA25.18-201ENST00000607153 114 ntBASIC-0.09□□□□□ -2.42
CDC42SE1Q9NRR8 AL354950.2-201ENST00000617939 290 ntBASIC-0.09□□□□□ -2.42
CDC42SE1Q9NRR8 AC127459.3-201ENST00000624328 466 ntBASIC-0.09□□□□□ -2.42
CDC42SE1Q9NRR8 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.09□□□□□ -2.42
CDC42SE1Q9NRR8 MIR4251-201ENST00000635819 61 ntBASIC-0.09□□□□□ -2.42
CDC42SE1Q9NRR8 MIR411-201ENST00000362239 96 ntBASIC-0.1□□□□□ -2.43
CDC42SE1Q9NRR8 RNU1-17P-201ENST00000363022 152 ntBASIC-0.1□□□□□ -2.43
CDC42SE1Q9NRR8 RNU5F-3P-201ENST00000363767 117 ntBASIC-0.1□□□□□ -2.43
CDC42SE1Q9NRR8 RNU6-53P-201ENST00000365367 106 ntBASIC-0.1□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms