Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 AC002429.1-201ENST00000437672 148 ntBASIC0.97□□□□□ -2.25
POLE3Q9NRF9 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.97□□□□□ -2.25
POLE3Q9NRF9 AC093850.1-201ENST00000454121 251 ntBASIC0.97□□□□□ -2.25
POLE3Q9NRF9 AC087343.1-201ENST00000477341 475 ntBASIC0.97□□□□□ -2.25
POLE3Q9NRF9 RNU6-1114P-201ENST00000516022 107 ntBASIC0.97□□□□□ -2.25
POLE3Q9NRF9 RNU7-12P-201ENST00000516030 62 ntBASIC0.97□□□□□ -2.25
POLE3Q9NRF9 RNU6-917P-201ENST00000516294 104 ntBASIC0.97□□□□□ -2.25
POLE3Q9NRF9 RNU7-28P-201ENST00000516759 62 ntBASIC0.97□□□□□ -2.25
POLE3Q9NRF9 AC093023.1-201ENST00000547375 507 ntBASIC0.97□□□□□ -2.25
POLE3Q9NRF9 MIR3942-201ENST00000585264 109 ntBASIC0.97□□□□□ -2.25
POLE3Q9NRF9 AC024614.3-201ENST00000637860 256 ntBASIC0.97□□□□□ -2.25
POLE3Q9NRF9 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
POLE3Q9NRF9 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
POLE3Q9NRF9 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.96□□□□□ -2.25
POLE3Q9NRF9 RNU6-595P-201ENST00000363944 107 ntBASIC0.96□□□□□ -2.26
POLE3Q9NRF9 RNU6-1090P-201ENST00000364065 94 ntBASIC0.96□□□□□ -2.26
POLE3Q9NRF9 SNORD114-24-201ENST00000365029 72 ntBASIC0.96□□□□□ -2.26
POLE3Q9NRF9 RNU6-407P-201ENST00000365280 104 ntBASIC0.96□□□□□ -2.26
POLE3Q9NRF9 SNORA2.2-201ENST00000365473 135 ntBASIC0.96□□□□□ -2.26
POLE3Q9NRF9 RNU6-281P-201ENST00000384212 103 ntBASIC0.96□□□□□ -2.26
POLE3Q9NRF9 SNORA20B-201ENST00000384220 132 ntBASIC0.96□□□□□ -2.26
POLE3Q9NRF9 RNU6-373P-201ENST00000411247 98 ntBASIC0.96□□□□□ -2.26
POLE3Q9NRF9 SNORD124-201ENST00000459577 104 ntBASIC0.96□□□□□ -2.26
POLE3Q9NRF9 AC091021.1-201ENST00000468051 388 ntBASIC0.96□□□□□ -2.26
POLE3Q9NRF9 RNU6-506P-201ENST00000516553 94 ntBASIC0.96□□□□□ -2.26
POLE3Q9NRF9 MTND2P38-201ENST00000522536 667 ntBASIC0.96□□□□□ -2.26
POLE3Q9NRF9 AC245505.1-201ENST00000556398 224 ntBASIC0.96□□□□□ -2.26
POLE3Q9NRF9 AC068790.6-201ENST00000602558 258 ntBASIC0.96□□□□□ -2.26
POLE3Q9NRF9 AL020996.3-201ENST00000606617 222 ntBASIC0.96□□□□□ -2.26
POLE3Q9NRF9 AC100812.1-201ENST00000607622 580 ntBASIC0.96□□□□□ -2.26
POLE3Q9NRF9 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.96□□□□□ -2.26
POLE3Q9NRF9 RNU6-222P-201ENST00000362438 107 ntBASIC0.95□□□□□ -2.26
POLE3Q9NRF9 Y_RNA.124-201ENST00000363339 93 ntBASIC0.95□□□□□ -2.26
POLE3Q9NRF9 RNU6-596P-201ENST00000365395 98 ntBASIC0.95□□□□□ -2.26
POLE3Q9NRF9 SNORD116-2-201ENST00000384274 95 ntBASIC0.95□□□□□ -2.26
POLE3Q9NRF9 Y_RNA.490-201ENST00000384413 102 ntBASIC0.95□□□□□ -2.26
POLE3Q9NRF9 SNORD116-6-201ENST00000384711 96 ntBASIC0.95□□□□□ -2.26
POLE3Q9NRF9 RNU6-376P-201ENST00000384731 106 ntBASIC0.95□□□□□ -2.26
POLE3Q9NRF9 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.95□□□□□ -2.26
POLE3Q9NRF9 POLR2J4-204ENST00000418424 324 ntBASIC0.95□□□□□ -2.26
POLE3Q9NRF9 AC092473.1-201ENST00000441098 221 ntBASIC0.95□□□□□ -2.26
POLE3Q9NRF9 RPL39P28-201ENST00000465655 155 ntBASIC0.95□□□□□ -2.26
POLE3Q9NRF9 AL163540.1-201ENST00000485382 386 ntBASIC0.95□□□□□ -2.26
POLE3Q9NRF9 AC018710.1-201ENST00000506509 158 ntBASIC0.95□□□□□ -2.26
POLE3Q9NRF9 SNORD79.1-201ENST00000516069 84 ntBASIC0.95□□□□□ -2.26
POLE3Q9NRF9 RNA5SP458-201ENST00000516188 119 ntBASIC0.95□□□□□ -2.26
POLE3Q9NRF9 ACA64.5-201ENST00000516207 127 ntBASIC0.95□□□□□ -2.26
POLE3Q9NRF9 RNU1-54P-201ENST00000517181 120 ntBASIC0.95□□□□□ -2.26
POLE3Q9NRF9 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.95□□□□□ -2.26
POLE3Q9NRF9 AC109635.3-201ENST00000529536 185 ntBASIC0.95□□□□□ -2.26
POLE3Q9NRF9 SNORD114-21-201ENST00000606412 72 ntBASIC0.95□□□□□ -2.26
POLE3Q9NRF9 snoU13.31-201ENST00000607291 104 ntBASIC0.95□□□□□ -2.26
POLE3Q9NRF9 AC005592.1-201ENST00000566527 1640 ntBASIC0.94□□□□□ -2.26
POLE3Q9NRF9 SNORA80D-201ENST00000384488 135 ntBASIC0.94□□□□□ -2.26
POLE3Q9NRF9 RNU1-139P-201ENST00000391307 165 ntBASIC0.94□□□□□ -2.26
POLE3Q9NRF9 MTCYBP4-201ENST00000401524 249 ntBASIC0.94□□□□□ -2.26
POLE3Q9NRF9 UQCRBP2-201ENST00000447827 297 ntBASIC0.94□□□□□ -2.26
POLE3Q9NRF9 OR9P1P-201ENST00000496431 281 ntBASIC0.94□□□□□ -2.26
POLE3Q9NRF9 AC022493.2-201ENST00000506122 481 ntBASIC0.94□□□□□ -2.26
POLE3Q9NRF9 PDCD5P2-201ENST00000507570 312 ntBASIC0.94□□□□□ -2.26
POLE3Q9NRF9 AC046134.1-201ENST00000514454 666 ntBASIC0.94□□□□□ -2.26
POLE3Q9NRF9 RNU6-341P-201ENST00000516973 96 ntBASIC0.94□□□□□ -2.26
POLE3Q9NRF9 AP002004.2-201ENST00000531656 154 ntBASIC0.94□□□□□ -2.26
POLE3Q9NRF9 AF250324.2-201ENST00000608299 610 ntBASIC0.94□□□□□ -2.26
POLE3Q9NRF9 AC103591.3-201ENST00000608684 209 ntBASIC0.94□□□□□ -2.26
POLE3Q9NRF9 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.94□□□□□ -2.26
POLE3Q9NRF9 AC090617.10-201ENST00000624308 134 ntBASIC0.94□□□□□ -2.26
POLE3Q9NRF9 SNORA1B-201ENST00000362535 133 ntBASIC0.93□□□□□ -2.26
POLE3Q9NRF9 Y_RNA.106-201ENST00000363189 100 ntBASIC0.93□□□□□ -2.26
POLE3Q9NRF9 RNU6-1059P-201ENST00000363752 98 ntBASIC0.93□□□□□ -2.26
POLE3Q9NRF9 Y_RNA.595-201ENST00000410403 105 ntBASIC0.93□□□□□ -2.26
POLE3Q9NRF9 AC009161.1-201ENST00000417306 376 ntBASIC0.93□□□□□ -2.26
POLE3Q9NRF9 AC018865.2-201ENST00000423631 129 ntBASIC0.93□□□□□ -2.26
POLE3Q9NRF9 AC104332.1-201ENST00000440471 797 ntBASIC0.93□□□□□ -2.26
POLE3Q9NRF9 RNA5SP20-201ENST00000515976 84 ntBASIC0.93□□□□□ -2.26
POLE3Q9NRF9 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.93□□□□□ -2.26
POLE3Q9NRF9 AC090617.3-201ENST00000573670 475 ntBASIC0.93□□□□□ -2.26
POLE3Q9NRF9 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.93□□□□□ -2.26
POLE3Q9NRF9 MIR3684-201ENST00000579779 74 ntBASIC0.93□□□□□ -2.26
POLE3Q9NRF9 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.93□□□□□ -2.26
POLE3Q9NRF9 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.93□□□□□ -2.26
POLE3Q9NRF9 AC073544.1-201ENST00000600110 1595 ntBASIC0.92□□□□□ -2.26
POLE3Q9NRF9 AC008163.1-202ENST00000636004 2889 ntBASIC0.92□□□□□ -2.26
POLE3Q9NRF9 Y_RNA.48-201ENST00000362710 103 ntBASIC0.92□□□□□ -2.26
POLE3Q9NRF9 RNU4-38P-201ENST00000364472 129 ntBASIC0.92□□□□□ -2.26
POLE3Q9NRF9 RNU1-36P-201ENST00000365130 165 ntBASIC0.92□□□□□ -2.26
POLE3Q9NRF9 Y_RNA.327-201ENST00000365201 102 ntBASIC0.92□□□□□ -2.26
POLE3Q9NRF9 Y_RNA.363-201ENST00000365529 113 ntBASIC0.92□□□□□ -2.26
POLE3Q9NRF9 RNU6-1264P-201ENST00000383891 107 ntBASIC0.92□□□□□ -2.26
POLE3Q9NRF9 RNU6-1013P-201ENST00000384180 107 ntBASIC0.92□□□□□ -2.26
POLE3Q9NRF9 Y_RNA.517-201ENST00000384551 106 ntBASIC0.92□□□□□ -2.26
POLE3Q9NRF9 RNA5SP482-201ENST00000391269 118 ntBASIC0.92□□□□□ -2.26
POLE3Q9NRF9 MTND4LP16-201ENST00000440828 295 ntBASIC0.92□□□□□ -2.26
POLE3Q9NRF9 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.92□□□□□ -2.26
POLE3Q9NRF9 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.92□□□□□ -2.26
POLE3Q9NRF9 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.92□□□□□ -2.26
POLE3Q9NRF9 RNU6-864P-201ENST00000516256 108 ntBASIC0.92□□□□□ -2.26
POLE3Q9NRF9 RNU6-1291P-201ENST00000516591 104 ntBASIC0.92□□□□□ -2.26
POLE3Q9NRF9 AL121579.1-201ENST00000555129 305 ntBASIC0.92□□□□□ -2.26
POLE3Q9NRF9 MIR4769-201ENST00000584126 77 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 184 ms