Protein–RNA interactions for Protein: Q9HCE7

SMURF1, E3 ubiquitin-protein ligase SMURF1, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1Q9HCE7 U2.10-201ENST00000620268 191 ntBASIC2.77□□□□□ -1.97
SMURF1Q9HCE7 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SMURF1Q9HCE7 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SMURF1Q9HCE7 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.77□□□□□ -1.97
SMURF1Q9HCE7 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SMURF1Q9HCE7 MIR367-201ENST00000362299 68 ntBASIC2.76□□□□□ -1.97
SMURF1Q9HCE7 Y_RNA.172-201ENST00000363765 102 ntBASIC2.76□□□□□ -1.97
SMURF1Q9HCE7 RNU4-13P-201ENST00000364019 141 ntBASIC2.76□□□□□ -1.97
SMURF1Q9HCE7 U8.7-201ENST00000364940 136 ntBASIC2.76□□□□□ -1.97
SMURF1Q9HCE7 MIR181A2-201ENST00000384863 110 ntBASIC2.76□□□□□ -1.97
SMURF1Q9HCE7 RNA5SP274-201ENST00000410484 108 ntBASIC2.76□□□□□ -1.97
SMURF1Q9HCE7 RN7SKP51-201ENST00000410781 304 ntBASIC2.76□□□□□ -1.97
SMURF1Q9HCE7 RNA5SP492-201ENST00000411330 114 ntBASIC2.76□□□□□ -1.97
SMURF1Q9HCE7 RN7SL633P-201ENST00000488974 297 ntBASIC2.76□□□□□ -1.97
SMURF1Q9HCE7 AC117454.1-201ENST00000491120 168 ntBASIC2.76□□□□□ -1.97
SMURF1Q9HCE7 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.76□□□□□ -1.97
SMURF1Q9HCE7 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.76□□□□□ -1.97
SMURF1Q9HCE7 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.76□□□□□ -1.97
SMURF1Q9HCE7 MIR4724-201ENST00000579485 89 ntBASIC2.76□□□□□ -1.97
SMURF1Q9HCE7 MIR4438-201ENST00000585271 93 ntBASIC2.76□□□□□ -1.97
SMURF1Q9HCE7 AC007179.3-201ENST00000604976 235 ntBASIC2.76□□□□□ -1.97
SMURF1Q9HCE7 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.76□□□□□ -1.97
SMURF1Q9HCE7 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.75□□□□□ -1.97
SMURF1Q9HCE7 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SMURF1Q9HCE7 Y_RNA.182-201ENST00000363880 111 ntBASIC2.75□□□□□ -1.97
SMURF1Q9HCE7 RNA5SP387-201ENST00000364226 106 ntBASIC2.75□□□□□ -1.97
SMURF1Q9HCE7 RNU6-312P-201ENST00000364629 107 ntBASIC2.75□□□□□ -1.97
SMURF1Q9HCE7 RNU6-746P-201ENST00000384112 109 ntBASIC2.75□□□□□ -1.97
SMURF1Q9HCE7 AL135786.1-201ENST00000415892 214 ntBASIC2.75□□□□□ -1.97
SMURF1Q9HCE7 AL451074.5-201ENST00000415894 435 ntBASIC2.75□□□□□ -1.97
SMURF1Q9HCE7 EDDM3CP-201ENST00000415977 425 ntBASIC2.75□□□□□ -1.97
SMURF1Q9HCE7 RPL39P40-201ENST00000445481 146 ntBASIC2.75□□□□□ -1.97
SMURF1Q9HCE7 RPS27AP9-201ENST00000477681 438 ntBASIC2.75□□□□□ -1.97
SMURF1Q9HCE7 RPS29P21-201ENST00000496272 170 ntBASIC2.75□□□□□ -1.97
SMURF1Q9HCE7 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.75□□□□□ -1.97
SMURF1Q9HCE7 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
SMURF1Q9HCE7 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.75□□□□□ -1.97
SMURF1Q9HCE7 RNU6-255P-201ENST00000516957 105 ntBASIC2.75□□□□□ -1.97
SMURF1Q9HCE7 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.75□□□□□ -1.97
SMURF1Q9HCE7 POLR3GP1-201ENST00000594073 261 ntBASIC2.75□□□□□ -1.97
SMURF1Q9HCE7 U2.20-201ENST00000613956 192 ntBASIC2.75□□□□□ -1.97
SMURF1Q9HCE7 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.74□□□□□ -1.97
SMURF1Q9HCE7 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SMURF1Q9HCE7 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SMURF1Q9HCE7 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
SMURF1Q9HCE7 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
SMURF1Q9HCE7 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SMURF1Q9HCE7 MIR340-201ENST00000362125 95 ntBASIC2.74□□□□□ -1.97
SMURF1Q9HCE7 Y_RNA.23-201ENST00000362496 106 ntBASIC2.74□□□□□ -1.97
SMURF1Q9HCE7 Y_RNA.75-201ENST00000362927 97 ntBASIC2.74□□□□□ -1.97
SMURF1Q9HCE7 RNU1-22P-201ENST00000363334 158 ntBASIC2.74□□□□□ -1.97
SMURF1Q9HCE7 RNU6-117P-201ENST00000365415 107 ntBASIC2.74□□□□□ -1.97
SMURF1Q9HCE7 RNU11-5P-201ENST00000391216 129 ntBASIC2.74□□□□□ -1.97
SMURF1Q9HCE7 AL590004.2-201ENST00000404787 371 ntBASIC2.74□□□□□ -1.97
SMURF1Q9HCE7 SNORA36B-201ENST00000410438 131 ntBASIC2.74□□□□□ -1.97
SMURF1Q9HCE7 RNA5SP120-201ENST00000410900 112 ntBASIC2.74□□□□□ -1.97
SMURF1Q9HCE7 AC245102.2-201ENST00000448956 180 ntBASIC2.74□□□□□ -1.97
SMURF1Q9HCE7 AC091021.1-201ENST00000468051 388 ntBASIC2.74□□□□□ -1.97
SMURF1Q9HCE7 AC097462.1-201ENST00000514125 324 ntBASIC2.74□□□□□ -1.97
SMURF1Q9HCE7 Y_RNA.797-201ENST00000515977 94 ntBASIC2.74□□□□□ -1.97
SMURF1Q9HCE7 AC127455.1-201ENST00000565496 145 ntBASIC2.74□□□□□ -1.97
SMURF1Q9HCE7 uc_338.25-201ENST00000613756 156 ntBASIC2.74□□□□□ -1.97
SMURF1Q9HCE7 MIR7112-201ENST00000616126 65 ntBASIC2.74□□□□□ -1.97
SMURF1Q9HCE7 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
SMURF1Q9HCE7 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
SMURF1Q9HCE7 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SMURF1Q9HCE7 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.73□□□□□ -1.97
SMURF1Q9HCE7 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
SMURF1Q9HCE7 Y_RNA.24-201ENST00000362508 103 ntBASIC2.73□□□□□ -1.97
SMURF1Q9HCE7 RNU4-10P-201ENST00000364383 140 ntBASIC2.73□□□□□ -1.97
SMURF1Q9HCE7 RNU6-969P-201ENST00000383900 105 ntBASIC2.73□□□□□ -1.97
SMURF1Q9HCE7 Y_RNA.441-201ENST00000384123 112 ntBASIC2.73□□□□□ -1.97
SMURF1Q9HCE7 SNORA26.7-201ENST00000391288 122 ntBASIC2.73□□□□□ -1.97
SMURF1Q9HCE7 AL162725.1-201ENST00000435405 301 ntBASIC2.73□□□□□ -1.97
SMURF1Q9HCE7 HMGN2P34-201ENST00000437647 269 ntBASIC2.73□□□□□ -1.97
SMURF1Q9HCE7 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.73□□□□□ -1.97
SMURF1Q9HCE7 AL353689.1-201ENST00000438895 199 ntBASIC2.73□□□□□ -1.97
SMURF1Q9HCE7 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.73□□□□□ -1.97
SMURF1Q9HCE7 AL392103.1-201ENST00000447000 198 ntBASIC2.73□□□□□ -1.97
SMURF1Q9HCE7 BX510359.1-201ENST00000456973 237 ntBASIC2.73□□□□□ -1.97
SMURF1Q9HCE7 RNU1-131P-201ENST00000458943 161 ntBASIC2.73□□□□□ -1.97
SMURF1Q9HCE7 RN7SL20P-201ENST00000488827 297 ntBASIC2.73□□□□□ -1.97
SMURF1Q9HCE7 AC005840.1-201ENST00000498412 377 ntBASIC2.73□□□□□ -1.97
SMURF1Q9HCE7 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.73□□□□□ -1.97
SMURF1Q9HCE7 RNU6-789P-201ENST00000517105 102 ntBASIC2.73□□□□□ -1.97
SMURF1Q9HCE7 RNU7-172P-201ENST00000517125 64 ntBASIC2.73□□□□□ -1.97
SMURF1Q9HCE7 MIR4744-201ENST00000581563 82 ntBASIC2.73□□□□□ -1.97
SMURF1Q9HCE7 AC108706.1-201ENST00000611053 297 ntBASIC2.73□□□□□ -1.97
SMURF1Q9HCE7 MAPK10-266ENST00000641066 6555 ntBASIC2.73□□□□□ -1.97
SMURF1Q9HCE7 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SMURF1Q9HCE7 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
SMURF1Q9HCE7 RNU6-275P-201ENST00000364910 107 ntBASIC2.72□□□□□ -1.97
SMURF1Q9HCE7 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SMURF1Q9HCE7 RNU6-160P-201ENST00000384591 107 ntBASIC2.72□□□□□ -1.97
SMURF1Q9HCE7 MIR616-201ENST00000385293 97 ntBASIC2.72□□□□□ -1.97
SMURF1Q9HCE7 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.72□□□□□ -1.97
SMURF1Q9HCE7 AC060773.1-201ENST00000421698 310 ntBASIC2.72□□□□□ -1.97
SMURF1Q9HCE7 RPL23AP54-201ENST00000495129 419 ntBASIC2.72□□□□□ -1.97
SMURF1Q9HCE7 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.72□□□□□ -1.97
SMURF1Q9HCE7 AC011406.1-201ENST00000512440 370 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 165.2 ms