Protein–RNA interactions for Protein: Q9H9Z2

LIN28A, Protein lin-28 homolog A, humanhuman

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28AQ9H9Z2 AC022493.2-201ENST00000506122 481 ntBASIC0.95□□□□□ -2.26
LIN28AQ9H9Z2 AC097462.1-201ENST00000514125 324 ntBASIC0.95□□□□□ -2.26
LIN28AQ9H9Z2 RNU6-341P-201ENST00000516973 96 ntBASIC0.95□□□□□ -2.26
LIN28AQ9H9Z2 RNU7-172P-201ENST00000517125 64 ntBASIC0.95□□□□□ -2.26
LIN28AQ9H9Z2 MIR4778-201ENST00000577635 80 ntBASIC0.95□□□□□ -2.26
LIN28AQ9H9Z2 MIR4273-201ENST00000582824 84 ntBASIC0.95□□□□□ -2.26
LIN28AQ9H9Z2 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.95□□□□□ -2.26
LIN28AQ9H9Z2 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
LIN28AQ9H9Z2 RNA5SP482-201ENST00000391269 118 ntBASIC0.94□□□□□ -2.26
LIN28AQ9H9Z2 AF228730.1-201ENST00000397972 663 ntBASIC0.94□□□□□ -2.26
LIN28AQ9H9Z2 RNU6-908P-201ENST00000410160 94 ntBASIC0.94□□□□□ -2.26
LIN28AQ9H9Z2 Y_RNA.615-201ENST00000410769 117 ntBASIC0.94□□□□□ -2.26
LIN28AQ9H9Z2 AC243428.1-201ENST00000421099 264 ntBASIC0.94□□□□□ -2.26
LIN28AQ9H9Z2 MTATP6P13-201ENST00000438531 667 ntBASIC0.94□□□□□ -2.26
LIN28AQ9H9Z2 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.94□□□□□ -2.26
LIN28AQ9H9Z2 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.94□□□□□ -2.26
LIN28AQ9H9Z2 AP002004.2-201ENST00000531656 154 ntBASIC0.94□□□□□ -2.26
LIN28AQ9H9Z2 AL590705.4-201ENST00000532209 134 ntBASIC0.94□□□□□ -2.26
LIN28AQ9H9Z2 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.94□□□□□ -2.26
LIN28AQ9H9Z2 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.94□□□□□ -2.26
LIN28AQ9H9Z2 MIR6767-201ENST00000637302 66 ntBASIC0.94□□□□□ -2.26
LIN28AQ9H9Z2 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
LIN28AQ9H9Z2 Y_RNA.212-201ENST00000364177 102 ntBASIC0.93□□□□□ -2.26
LIN28AQ9H9Z2 MIR10B-201ENST00000385011 110 ntBASIC0.93□□□□□ -2.26
LIN28AQ9H9Z2 SNORD41-201ENST00000386967 70 ntBASIC0.93□□□□□ -2.26
LIN28AQ9H9Z2 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.93□□□□□ -2.26
LIN28AQ9H9Z2 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC0.93□□□□□ -2.26
LIN28AQ9H9Z2 MTND1P1-201ENST00000445453 368 ntBASIC0.93□□□□□ -2.26
LIN28AQ9H9Z2 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.93□□□□□ -2.26
LIN28AQ9H9Z2 RNU6-947P-201ENST00000516264 106 ntBASIC0.93□□□□□ -2.26
LIN28AQ9H9Z2 RNU6-107P-201ENST00000516643 102 ntBASIC0.93□□□□□ -2.26
LIN28AQ9H9Z2 CBX3P8-201ENST00000532412 525 ntBASIC0.93□□□□□ -2.26
LIN28AQ9H9Z2 AC023157.2-201ENST00000540596 141 ntBASIC0.93□□□□□ -2.26
LIN28AQ9H9Z2 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC0.93□□□□□ -2.26
LIN28AQ9H9Z2 UBL5P4-201ENST00000562584 236 ntBASIC0.93□□□□□ -2.26
LIN28AQ9H9Z2 AC136443.5-201ENST00000603741 370 ntBASIC0.93□□□□□ -2.26
LIN28AQ9H9Z2 MIR6504-201ENST00000613520 61 ntBASIC0.93□□□□□ -2.26
LIN28AQ9H9Z2 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.93□□□□□ -2.26
LIN28AQ9H9Z2 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
LIN28AQ9H9Z2 RNU4-38P-201ENST00000364472 129 ntBASIC0.92□□□□□ -2.26
LIN28AQ9H9Z2 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
LIN28AQ9H9Z2 RNU6-1080P-201ENST00000383982 107 ntBASIC0.92□□□□□ -2.26
LIN28AQ9H9Z2 Y_RNA.414-201ENST00000384011 101 ntBASIC0.92□□□□□ -2.26
LIN28AQ9H9Z2 RNU6-483P-201ENST00000384088 108 ntBASIC0.92□□□□□ -2.26
LIN28AQ9H9Z2 MIR499A-201ENST00000384903 122 ntBASIC0.92□□□□□ -2.26
LIN28AQ9H9Z2 RNU6-373P-201ENST00000411247 98 ntBASIC0.92□□□□□ -2.26
LIN28AQ9H9Z2 MTND1P26-201ENST00000440488 538 ntBASIC0.92□□□□□ -2.26
LIN28AQ9H9Z2 AP000870.1-201ENST00000472927 406 ntBASIC0.92□□□□□ -2.26
LIN28AQ9H9Z2 PDCD5P2-201ENST00000507570 312 ntBASIC0.92□□□□□ -2.26
LIN28AQ9H9Z2 AC046134.1-201ENST00000514454 666 ntBASIC0.92□□□□□ -2.26
LIN28AQ9H9Z2 RNU6-1114P-201ENST00000516022 107 ntBASIC0.92□□□□□ -2.26
LIN28AQ9H9Z2 AL121579.1-201ENST00000555129 305 ntBASIC0.92□□□□□ -2.26
LIN28AQ9H9Z2 MIR4653-201ENST00000585107 83 ntBASIC0.92□□□□□ -2.26
LIN28AQ9H9Z2 ZNF299P-201ENST00000406845 1804 ntBASIC0.92□□□□□ -2.26
LIN28AQ9H9Z2 RNU6-1252P-201ENST00000363054 104 ntBASIC0.91□□□□□ -2.26
LIN28AQ9H9Z2 RNY3P3-201ENST00000363816 102 ntBASIC0.91□□□□□ -2.26
LIN28AQ9H9Z2 Y_RNA.256-201ENST00000364594 104 ntBASIC0.91□□□□□ -2.26
LIN28AQ9H9Z2 SNORD116-11-201ENST00000383882 92 ntBASIC0.91□□□□□ -2.26
LIN28AQ9H9Z2 RNU1-139P-201ENST00000391307 165 ntBASIC0.91□□□□□ -2.26
LIN28AQ9H9Z2 MIR1287-201ENST00000408492 90 ntBASIC0.91□□□□□ -2.26
LIN28AQ9H9Z2 AL590632.1-201ENST00000424289 371 ntBASIC0.91□□□□□ -2.26
LIN28AQ9H9Z2 MTATP6P17-201ENST00000431030 672 ntBASIC0.91□□□□□ -2.26
LIN28AQ9H9Z2 LINC01399-202ENST00000458450 244 ntBASIC0.91□□□□□ -2.26
LIN28AQ9H9Z2 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.91□□□□□ -2.26
LIN28AQ9H9Z2 RNU7-12P-201ENST00000516030 62 ntBASIC0.91□□□□□ -2.26
LIN28AQ9H9Z2 Y_RNA.706-201ENST00000516933 99 ntBASIC0.91□□□□□ -2.26
LIN28AQ9H9Z2 AC091144.1-201ENST00000519573 138 ntBASIC0.91□□□□□ -2.26
LIN28AQ9H9Z2 AL358944.1-201ENST00000528537 144 ntBASIC0.91□□□□□ -2.26
LIN28AQ9H9Z2 AC090617.3-201ENST00000573670 475 ntBASIC0.91□□□□□ -2.26
LIN28AQ9H9Z2 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.91□□□□□ -2.26
LIN28AQ9H9Z2 AC100812.1-201ENST00000607622 580 ntBASIC0.91□□□□□ -2.26
LIN28AQ9H9Z2 Y_RNA.224-201ENST00000364308 111 ntBASIC0.9□□□□□ -2.27
LIN28AQ9H9Z2 RNU6-1264P-201ENST00000383891 107 ntBASIC0.9□□□□□ -2.27
LIN28AQ9H9Z2 MIR520E-201ENST00000384867 87 ntBASIC0.9□□□□□ -2.27
LIN28AQ9H9Z2 SUMO1P2-201ENST00000452524 304 ntBASIC0.9□□□□□ -2.27
LIN28AQ9H9Z2 RNU7-66P-201ENST00000459469 62 ntBASIC0.9□□□□□ -2.27
LIN28AQ9H9Z2 OR9P1P-201ENST00000496431 281 ntBASIC0.9□□□□□ -2.27
LIN28AQ9H9Z2 RNU6-1278P-201ENST00000516130 107 ntBASIC0.9□□□□□ -2.27
LIN28AQ9H9Z2 MIR4698-201ENST00000577795 80 ntBASIC0.9□□□□□ -2.27
LIN28AQ9H9Z2 MIR4452-201ENST00000583004 71 ntBASIC0.9□□□□□ -2.27
LIN28AQ9H9Z2 MIR3672-201ENST00000584290 82 ntBASIC0.9□□□□□ -2.27
LIN28AQ9H9Z2 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
LIN28AQ9H9Z2 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.9□□□□□ -2.27
LIN28AQ9H9Z2 MIR1321-201ENST00000637766 79 ntBASIC0.9□□□□□ -2.27
LIN28AQ9H9Z2 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.9□□□□□ -2.27
LIN28AQ9H9Z2 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
LIN28AQ9H9Z2 CASC19-280ENST00000642102 1351 ntBASIC0.89□□□□□ -2.27
LIN28AQ9H9Z2 Y_RNA.124-201ENST00000363339 93 ntBASIC0.89□□□□□ -2.27
LIN28AQ9H9Z2 RNU6-595P-201ENST00000363944 107 ntBASIC0.89□□□□□ -2.27
LIN28AQ9H9Z2 Y_RNA.191-201ENST00000363972 113 ntBASIC0.89□□□□□ -2.27
LIN28AQ9H9Z2 RNU1-93P-201ENST00000364704 169 ntBASIC0.89□□□□□ -2.27
LIN28AQ9H9Z2 RNU6-281P-201ENST00000384212 103 ntBASIC0.89□□□□□ -2.27
LIN28AQ9H9Z2 U8.16-201ENST00000391279 133 ntBASIC0.89□□□□□ -2.27
LIN28AQ9H9Z2 RNU2-16P-201ENST00000410712 136 ntBASIC0.89□□□□□ -2.27
LIN28AQ9H9Z2 CALM2P4-201ENST00000430810 426 ntBASIC0.89□□□□□ -2.27
LIN28AQ9H9Z2 AL445305.1-201ENST00000432577 575 ntBASIC0.89□□□□□ -2.27
LIN28AQ9H9Z2 MTND3P21-201ENST00000433774 331 ntBASIC0.89□□□□□ -2.27
LIN28AQ9H9Z2 RNU6-917P-201ENST00000516294 104 ntBASIC0.89□□□□□ -2.27
LIN28AQ9H9Z2 AC026407.1-201ENST00000518369 204 ntBASIC0.89□□□□□ -2.27
LIN28AQ9H9Z2 AC090142.3-201ENST00000519012 385 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 161.2 ms