Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 RNU6-1237P-201ENST00000384777 107 ntBASIC0.26□□□□□ -2.37
VCX3BQ9H321 MIR514A2-201ENST00000385131 88 ntBASIC0.26□□□□□ -2.37
VCX3BQ9H321 MIR514A3-201ENST00000385132 88 ntBASIC0.26□□□□□ -2.37
VCX3BQ9H321 RNU6-159P-201ENST00000391080 106 ntBASIC0.26□□□□□ -2.37
VCX3BQ9H321 CALM2P3-201ENST00000400429 449 ntBASIC0.26□□□□□ -2.37
VCX3BQ9H321 MIR1185-1-201ENST00000408598 86 ntBASIC0.26□□□□□ -2.37
VCX3BQ9H321 RN7SKP142-201ENST00000411236 328 ntBASIC0.26□□□□□ -2.37
VCX3BQ9H321 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.26□□□□□ -2.37
VCX3BQ9H321 MTCYBP10-201ENST00000424905 650 ntBASIC0.26□□□□□ -2.37
VCX3BQ9H321 AC092628.1-201ENST00000436250 252 ntBASIC0.26□□□□□ -2.37
VCX3BQ9H321 RPL30P10-201ENST00000488148 337 ntBASIC0.26□□□□□ -2.37
VCX3BQ9H321 AC091885.1-201ENST00000506658 268 ntBASIC0.26□□□□□ -2.37
VCX3BQ9H321 SNORA68.3-201ENST00000515906 83 ntBASIC0.26□□□□□ -2.37
VCX3BQ9H321 RNU6-1110P-201ENST00000516462 101 ntBASIC0.26□□□□□ -2.37
VCX3BQ9H321 RNU6-1291P-201ENST00000516591 104 ntBASIC0.26□□□□□ -2.37
VCX3BQ9H321 RPL21P9-201ENST00000556149 474 ntBASIC0.26□□□□□ -2.37
VCX3BQ9H321 MIR4528-201ENST00000577763 90 ntBASIC0.26□□□□□ -2.37
VCX3BQ9H321 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.26□□□□□ -2.37
VCX3BQ9H321 AC009248.2-201ENST00000619826 254 ntBASIC0.26□□□□□ -2.37
VCX3BQ9H321 AC073534.2-201ENST00000620377 381 ntBASIC0.26□□□□□ -2.37
VCX3BQ9H321 AC091931.1-201ENST00000623488 728 ntBASIC0.26□□□□□ -2.37
VCX3BQ9H321 MIR5087-201ENST00000635826 76 ntBASIC0.26□□□□□ -2.37
VCX3BQ9H321 Y_RNA.1-201ENST00000352915 104 ntBASIC0.25□□□□□ -2.37
VCX3BQ9H321 SNORA25.3-201ENST00000363205 127 ntBASIC0.25□□□□□ -2.37
VCX3BQ9H321 RNU6-833P-201ENST00000363486 107 ntBASIC0.25□□□□□ -2.37
VCX3BQ9H321 RNU5F-3P-201ENST00000363767 117 ntBASIC0.25□□□□□ -2.37
VCX3BQ9H321 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
VCX3BQ9H321 RNU6-1297P-201ENST00000384415 104 ntBASIC0.25□□□□□ -2.37
VCX3BQ9H321 MIR891A-201ENST00000401237 79 ntBASIC0.25□□□□□ -2.37
VCX3BQ9H321 AC018865.2-201ENST00000423631 129 ntBASIC0.25□□□□□ -2.37
VCX3BQ9H321 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.25□□□□□ -2.37
VCX3BQ9H321 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.25□□□□□ -2.37
VCX3BQ9H321 AL353572.1-201ENST00000442490 417 ntBASIC0.25□□□□□ -2.37
VCX3BQ9H321 MTCO1P19-201ENST00000443487 500 ntBASIC0.25□□□□□ -2.37
VCX3BQ9H321 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.25□□□□□ -2.37
VCX3BQ9H321 MTCO2P30-201ENST00000503662 364 ntBASIC0.25□□□□□ -2.37
VCX3BQ9H321 AC018710.1-201ENST00000506509 158 ntBASIC0.25□□□□□ -2.37
VCX3BQ9H321 RNU6-415P-201ENST00000516252 97 ntBASIC0.25□□□□□ -2.37
VCX3BQ9H321 RNU6-229P-201ENST00000516614 102 ntBASIC0.25□□□□□ -2.37
VCX3BQ9H321 AC104383.1-201ENST00000530297 370 ntBASIC0.25□□□□□ -2.37
VCX3BQ9H321 AC026371.1-201ENST00000551867 419 ntBASIC0.25□□□□□ -2.37
VCX3BQ9H321 MTND1P24-201ENST00000552175 861 ntBASIC0.25□□□□□ -2.37
VCX3BQ9H321 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.25□□□□□ -2.37
VCX3BQ9H321 MIR5093-201ENST00000583199 100 ntBASIC0.25□□□□□ -2.37
VCX3BQ9H321 AC093913.1-201ENST00000614178 329 ntBASIC0.25□□□□□ -2.37
VCX3BQ9H321 AC100810.6-201ENST00000638068 285 ntBASIC0.25□□□□□ -2.37
VCX3BQ9H321 AC121333.1-201ENST00000567488 2709 ntBASIC0.25□□□□□ -2.37
VCX3BQ9H321 MTND5P16-201ENST00000460269 1703 ntBASIC0.24□□□□□ -2.37
VCX3BQ9H321 Y_RNA.179-201ENST00000363844 90 ntBASIC0.24□□□□□ -2.37
VCX3BQ9H321 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.24□□□□□ -2.37
VCX3BQ9H321 SNORA20B-201ENST00000384220 132 ntBASIC0.24□□□□□ -2.37
VCX3BQ9H321 RNU6-790P-201ENST00000384479 105 ntBASIC0.24□□□□□ -2.37
VCX3BQ9H321 RNU6-541P-201ENST00000384709 110 ntBASIC0.24□□□□□ -2.37
VCX3BQ9H321 RNU6-376P-201ENST00000384731 106 ntBASIC0.24□□□□□ -2.37
VCX3BQ9H321 RNU1-119P-201ENST00000391122 165 ntBASIC0.24□□□□□ -2.37
VCX3BQ9H321 Y_RNA.595-201ENST00000410403 105 ntBASIC0.24□□□□□ -2.37
VCX3BQ9H321 RPL30P16-201ENST00000419341 429 ntBASIC0.24□□□□□ -2.37
VCX3BQ9H321 MTCO2P12-201ENST00000427426 682 ntBASIC0.24□□□□□ -2.37
VCX3BQ9H321 AC083798.1-201ENST00000472671 131 ntBASIC0.24□□□□□ -2.37
VCX3BQ9H321 MTND3P7-201ENST00000474435 343 ntBASIC0.24□□□□□ -2.37
VCX3BQ9H321 AC108729.3-201ENST00000513484 108 ntBASIC0.24□□□□□ -2.37
VCX3BQ9H321 RN7SKP164-201ENST00000516138 266 ntBASIC0.24□□□□□ -2.37
VCX3BQ9H321 RN7SKP12-201ENST00000516275 143 ntBASIC0.24□□□□□ -2.37
VCX3BQ9H321 AC023442.1-201ENST00000531247 422 ntBASIC0.24□□□□□ -2.37
VCX3BQ9H321 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.24□□□□□ -2.37
VCX3BQ9H321 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.24□□□□□ -2.37
VCX3BQ9H321 MTATP6P24-201ENST00000576835 677 ntBASIC0.24□□□□□ -2.37
VCX3BQ9H321 AC073648.5-201ENST00000603502 305 ntBASIC0.24□□□□□ -2.37
VCX3BQ9H321 MIR6767-201ENST00000637302 66 ntBASIC0.24□□□□□ -2.37
VCX3BQ9H321 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.23□□□□□ -2.37
VCX3BQ9H321 RNU4-41P-201ENST00000364426 143 ntBASIC0.23□□□□□ -2.37
VCX3BQ9H321 RNU6-522P-201ENST00000364497 107 ntBASIC0.23□□□□□ -2.37
VCX3BQ9H321 RNU6-128P-201ENST00000383976 107 ntBASIC0.23□□□□□ -2.37
VCX3BQ9H321 RNU6-1067P-201ENST00000384752 107 ntBASIC0.23□□□□□ -2.37
VCX3BQ9H321 RNU5A-5P-201ENST00000411054 116 ntBASIC0.23□□□□□ -2.37
VCX3BQ9H321 ZNF885P-201ENST00000420174 1098 ntBASIC0.23□□□□□ -2.37
VCX3BQ9H321 Z98949.2-201ENST00000440996 144 ntBASIC0.23□□□□□ -2.37
VCX3BQ9H321 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC0.23□□□□□ -2.37
VCX3BQ9H321 CYCTP-201ENST00000504253 315 ntBASIC0.23□□□□□ -2.37
VCX3BQ9H321 RNU7-41P-201ENST00000515917 61 ntBASIC0.23□□□□□ -2.37
VCX3BQ9H321 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.23□□□□□ -2.37
VCX3BQ9H321 AC011195.1-201ENST00000578177 177 ntBASIC0.23□□□□□ -2.37
VCX3BQ9H321 AC120024.3-201ENST00000603167 156 ntBASIC0.23□□□□□ -2.37
VCX3BQ9H321 AP001330.5-201ENST00000607176 411 ntBASIC0.23□□□□□ -2.37
VCX3BQ9H321 AC007684.1-201ENST00000609671 477 ntBASIC0.23□□□□□ -2.37
VCX3BQ9H321 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
VCX3BQ9H321 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC0.22□□□□□ -2.37
VCX3BQ9H321 RNY1P10-201ENST00000363268 113 ntBASIC0.22□□□□□ -2.37
VCX3BQ9H321 Y_RNA.151-201ENST00000363566 112 ntBASIC0.22□□□□□ -2.37
VCX3BQ9H321 RNU6-407P-201ENST00000365280 104 ntBASIC0.22□□□□□ -2.37
VCX3BQ9H321 MIR452-201ENST00000385020 85 ntBASIC0.22□□□□□ -2.37
VCX3BQ9H321 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.22□□□□□ -2.37
VCX3BQ9H321 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC0.22□□□□□ -2.37
VCX3BQ9H321 MRPS18CP6-201ENST00000423587 223 ntBASIC0.22□□□□□ -2.37
VCX3BQ9H321 PIGPP3-201ENST00000425307 415 ntBASIC0.22□□□□□ -2.37
VCX3BQ9H321 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.22□□□□□ -2.37
VCX3BQ9H321 AC067940.1-201ENST00000458411 300 ntBASIC0.22□□□□□ -2.37
VCX3BQ9H321 RNU6-261P-201ENST00000459506 102 ntBASIC0.22□□□□□ -2.37
VCX3BQ9H321 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.22□□□□□ -2.37
VCX3BQ9H321 RNA5SP20-201ENST00000515976 84 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms