Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 RNU4-20P-201ENST00000365601 151 ntBASIC0.49□□□□□ -2.33
ALX4Q9H161 Y_RNA.415-201ENST00000384012 112 ntBASIC0.49□□□□□ -2.33
ALX4Q9H161 MIR562-201ENST00000384894 95 ntBASIC0.49□□□□□ -2.33
ALX4Q9H161 U8.16-201ENST00000391279 133 ntBASIC0.49□□□□□ -2.33
ALX4Q9H161 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.49□□□□□ -2.33
ALX4Q9H161 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC0.49□□□□□ -2.33
ALX4Q9H161 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.49□□□□□ -2.33
ALX4Q9H161 RNU6-261P-201ENST00000459506 102 ntBASIC0.49□□□□□ -2.33
ALX4Q9H161 RNA5SP121-201ENST00000516537 101 ntBASIC0.49□□□□□ -2.33
ALX4Q9H161 AP002001.1-203ENST00000534002 267 ntBASIC0.49□□□□□ -2.33
ALX4Q9H161 PRELID3BP2-201ENST00000605362 201 ntBASIC0.49□□□□□ -2.33
ALX4Q9H161 AP001330.5-201ENST00000607176 411 ntBASIC0.49□□□□□ -2.33
ALX4Q9H161 FAM157A-202ENST00000615155 405 ntBASIC0.49□□□□□ -2.33
ALX4Q9H161 AC068137.4-201ENST00000638485 296 ntBASIC0.49□□□□□ -2.33
ALX4Q9H161 RNU6-727P-201ENST00000363592 107 ntBASIC0.48□□□□□ -2.33
ALX4Q9H161 Y_RNA.167-201ENST00000363735 109 ntBASIC0.48□□□□□ -2.33
ALX4Q9H161 RNU6-110P-201ENST00000384508 104 ntBASIC0.48□□□□□ -2.33
ALX4Q9H161 CALM2P3-201ENST00000400429 449 ntBASIC0.48□□□□□ -2.33
ALX4Q9H161 RPS26P5-201ENST00000418544 335 ntBASIC0.48□□□□□ -2.33
ALX4Q9H161 FABP5P4-201ENST00000437203 171 ntBASIC0.48□□□□□ -2.33
ALX4Q9H161 RPEP5-201ENST00000441137 268 ntBASIC0.48□□□□□ -2.33
ALX4Q9H161 MTND4P18-201ENST00000447010 465 ntBASIC0.48□□□□□ -2.33
ALX4Q9H161 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.48□□□□□ -2.33
ALX4Q9H161 LINC01399-202ENST00000458450 244 ntBASIC0.48□□□□□ -2.33
ALX4Q9H161 AC083798.1-201ENST00000472671 131 ntBASIC0.48□□□□□ -2.33
ALX4Q9H161 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.48□□□□□ -2.33
ALX4Q9H161 AC010598.1-201ENST00000510378 103 ntBASIC0.48□□□□□ -2.33
ALX4Q9H161 RN7SKP298-201ENST00000515950 94 ntBASIC0.48□□□□□ -2.33
ALX4Q9H161 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.48□□□□□ -2.33
ALX4Q9H161 AC027288.2-201ENST00000553028 243 ntBASIC0.48□□□□□ -2.33
ALX4Q9H161 MTATP6P24-201ENST00000576835 677 ntBASIC0.48□□□□□ -2.33
ALX4Q9H161 AC010620.1-201ENST00000601088 1102 ntBASIC0.48□□□□□ -2.33
ALX4Q9H161 AC104465.1-201ENST00000611365 139 ntBASIC0.48□□□□□ -2.33
ALX4Q9H161 AC073114.1-201ENST00000612027 490 ntBASIC0.48□□□□□ -2.33
ALX4Q9H161 AC007742.2-201ENST00000618226 398 ntBASIC0.48□□□□□ -2.33
ALX4Q9H161 AL158209.2-201ENST00000619266 216 ntBASIC0.48□□□□□ -2.33
ALX4Q9H161 Z69908.1-201ENST00000622603 247 ntBASIC0.48□□□□□ -2.33
ALX4Q9H161 RNU6-280P-201ENST00000364145 104 ntBASIC0.47□□□□□ -2.33
ALX4Q9H161 RNU4-41P-201ENST00000364426 143 ntBASIC0.47□□□□□ -2.33
ALX4Q9H161 SNORA75-201ENST00000384158 137 ntBASIC0.47□□□□□ -2.33
ALX4Q9H161 RNU6-793P-201ENST00000384233 104 ntBASIC0.47□□□□□ -2.33
ALX4Q9H161 SNORD116-13-201ENST00000384408 92 ntBASIC0.47□□□□□ -2.33
ALX4Q9H161 RNU6-790P-201ENST00000384479 105 ntBASIC0.47□□□□□ -2.33
ALX4Q9H161 Z82188.1-201ENST00000436709 154 ntBASIC0.47□□□□□ -2.33
ALX4Q9H161 MTND3P16-201ENST00000452205 344 ntBASIC0.47□□□□□ -2.33
ALX4Q9H161 AC093850.1-201ENST00000454121 251 ntBASIC0.47□□□□□ -2.33
ALX4Q9H161 AC245047.8-201ENST00000456455 284 ntBASIC0.47□□□□□ -2.33
ALX4Q9H161 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.47□□□□□ -2.33
ALX4Q9H161 AC091179.3-201ENST00000474761 144 ntBASIC0.47□□□□□ -2.33
ALX4Q9H161 AC010469.2-201ENST00000496412 480 ntBASIC0.47□□□□□ -2.33
ALX4Q9H161 OR9P1P-201ENST00000496431 281 ntBASIC0.47□□□□□ -2.33
ALX4Q9H161 RNU7-12P-201ENST00000516030 62 ntBASIC0.47□□□□□ -2.33
ALX4Q9H161 SNORA70.12-201ENST00000516084 153 ntBASIC0.47□□□□□ -2.33
ALX4Q9H161 RNU2-56P-201ENST00000516826 190 ntBASIC0.47□□□□□ -2.33
ALX4Q9H161 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.47□□□□□ -2.33
ALX4Q9H161 AC104383.1-201ENST00000530297 370 ntBASIC0.47□□□□□ -2.33
ALX4Q9H161 AC023157.2-201ENST00000540596 141 ntBASIC0.47□□□□□ -2.33
ALX4Q9H161 MTND1P15-201ENST00000579262 949 ntBASIC0.47□□□□□ -2.33
ALX4Q9H161 AL353765.1-201ENST00000605514 183 ntBASIC0.47□□□□□ -2.33
ALX4Q9H161 AC004832.4-201ENST00000608952 331 ntBASIC0.47□□□□□ -2.33
ALX4Q9H161 AL391262.2-201ENST00000622466 494 ntBASIC0.47□□□□□ -2.33
ALX4Q9H161 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
ALX4Q9H161 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.46□□□□□ -2.34
ALX4Q9H161 Y_RNA.184-201ENST00000363884 108 ntBASIC0.46□□□□□ -2.34
ALX4Q9H161 RNU6-1322P-201ENST00000364309 107 ntBASIC0.46□□□□□ -2.34
ALX4Q9H161 SNORA69-201ENST00000383895 132 ntBASIC0.46□□□□□ -2.34
ALX4Q9H161 RNU6-128P-201ENST00000383976 107 ntBASIC0.46□□□□□ -2.34
ALX4Q9H161 RNU6-541P-201ENST00000384709 110 ntBASIC0.46□□□□□ -2.34
ALX4Q9H161 MIR193B-201ENST00000384907 83 ntBASIC0.46□□□□□ -2.34
ALX4Q9H161 RNU6-159P-201ENST00000391080 106 ntBASIC0.46□□□□□ -2.34
ALX4Q9H161 SNORA75.2-201ENST00000391138 150 ntBASIC0.46□□□□□ -2.34
ALX4Q9H161 SNORA75.3-201ENST00000391231 150 ntBASIC0.46□□□□□ -2.34
ALX4Q9H161 MIR936-201ENST00000401264 98 ntBASIC0.46□□□□□ -2.34
ALX4Q9H161 RNU4-55P-201ENST00000410731 137 ntBASIC0.46□□□□□ -2.34
ALX4Q9H161 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.46□□□□□ -2.34
ALX4Q9H161 MTCO3P19-201ENST00000415864 321 ntBASIC0.46□□□□□ -2.34
ALX4Q9H161 AC005534.2-201ENST00000431047 433 ntBASIC0.46□□□□□ -2.34
ALX4Q9H161 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC0.46□□□□□ -2.34
ALX4Q9H161 AL049830.1-201ENST00000468034 425 ntBASIC0.46□□□□□ -2.34
ALX4Q9H161 COX6CP6-201ENST00000490840 228 ntBASIC0.46□□□□□ -2.34
ALX4Q9H161 MTCO2P30-201ENST00000503662 364 ntBASIC0.46□□□□□ -2.34
ALX4Q9H161 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.46□□□□□ -2.34
ALX4Q9H161 AC097462.1-201ENST00000514125 324 ntBASIC0.46□□□□□ -2.34
ALX4Q9H161 Y_RNA.695-201ENST00000516715 107 ntBASIC0.46□□□□□ -2.34
ALX4Q9H161 AP003484.1-201ENST00000530974 250 ntBASIC0.46□□□□□ -2.34
ALX4Q9H161 RPL21P9-201ENST00000556149 474 ntBASIC0.46□□□□□ -2.34
ALX4Q9H161 PIGPP4-201ENST00000584447 307 ntBASIC0.46□□□□□ -2.34
ALX4Q9H161 AC012557.2-201ENST00000605919 418 ntBASIC0.46□□□□□ -2.34
ALX4Q9H161 AC023934.1-201ENST00000574529 2389 ntBASIC0.45□□□□□ -2.34
ALX4Q9H161 RNA5SP347-201ENST00000362445 119 ntBASIC0.45□□□□□ -2.34
ALX4Q9H161 Y_RNA.179-201ENST00000363844 90 ntBASIC0.45□□□□□ -2.34
ALX4Q9H161 RNU4-12P-201ENST00000365233 139 ntBASIC0.45□□□□□ -2.34
ALX4Q9H161 MIR514A2-201ENST00000385131 88 ntBASIC0.45□□□□□ -2.34
ALX4Q9H161 MIR514A3-201ENST00000385132 88 ntBASIC0.45□□□□□ -2.34
ALX4Q9H161 AC098934.3-201ENST00000430450 190 ntBASIC0.45□□□□□ -2.34
ALX4Q9H161 AL157398.1-201ENST00000452981 186 ntBASIC0.45□□□□□ -2.34
ALX4Q9H161 PCMTD1P1-201ENST00000455560 355 ntBASIC0.45□□□□□ -2.34
ALX4Q9H161 RNU6-956P-201ENST00000458868 103 ntBASIC0.45□□□□□ -2.34
ALX4Q9H161 RNU7-187P-201ENST00000458985 68 ntBASIC0.45□□□□□ -2.34
ALX4Q9H161 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms