Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 AC010154.1-201ENST00000425857 269 ntBASIC2.97□□□□□ -1.93
CCDC113Q9H0I3 AC063976.3-201ENST00000426849 329 ntBASIC2.97□□□□□ -1.93
CCDC113Q9H0I3 HMGN2P34-201ENST00000437647 269 ntBASIC2.97□□□□□ -1.93
CCDC113Q9H0I3 RNA5SP20-201ENST00000515976 84 ntBASIC2.97□□□□□ -1.93
CCDC113Q9H0I3 AC009127.3-201ENST00000570531 403 ntBASIC2.97□□□□□ -1.93
CCDC113Q9H0I3 MIR3162-201ENST00000581818 82 ntBASIC2.97□□□□□ -1.93
CCDC113Q9H0I3 Y_RNA.341-201ENST00000365341 102 ntBASIC2.96□□□□□ -1.94
CCDC113Q9H0I3 Y_RNA.539-201ENST00000384635 107 ntBASIC2.96□□□□□ -1.94
CCDC113Q9H0I3 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.96□□□□□ -1.94
CCDC113Q9H0I3 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.96□□□□□ -1.94
CCDC113Q9H0I3 RNU4-71P-201ENST00000516258 113 ntBASIC2.96□□□□□ -1.94
CCDC113Q9H0I3 MIR5194-201ENST00000582634 120 ntBASIC2.96□□□□□ -1.94
CCDC113Q9H0I3 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.96□□□□□ -1.94
CCDC113Q9H0I3 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
CCDC113Q9H0I3 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.95□□□□□ -1.94
CCDC113Q9H0I3 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CCDC113Q9H0I3 MIR340-201ENST00000362125 95 ntBASIC2.95□□□□□ -1.94
CCDC113Q9H0I3 RNU6-859P-201ENST00000362728 107 ntBASIC2.95□□□□□ -1.94
CCDC113Q9H0I3 Y_RNA.117-201ENST00000363294 101 ntBASIC2.95□□□□□ -1.94
CCDC113Q9H0I3 RNU1-148P-201ENST00000384472 162 ntBASIC2.95□□□□□ -1.94
CCDC113Q9H0I3 AC016909.1-201ENST00000415916 166 ntBASIC2.95□□□□□ -1.94
CCDC113Q9H0I3 AC060773.1-201ENST00000421698 310 ntBASIC2.95□□□□□ -1.94
CCDC113Q9H0I3 RPL23AP7-203ENST00000449021 469 ntBASIC2.95□□□□□ -1.94
CCDC113Q9H0I3 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.95□□□□□ -1.94
CCDC113Q9H0I3 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.95□□□□□ -1.94
CCDC113Q9H0I3 AC011406.1-201ENST00000512440 370 ntBASIC2.95□□□□□ -1.94
CCDC113Q9H0I3 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC113Q9H0I3 RNU6-1041P-201ENST00000516254 102 ntBASIC2.95□□□□□ -1.94
CCDC113Q9H0I3 SNORA9.3-201ENST00000516383 129 ntBASIC2.95□□□□□ -1.94
CCDC113Q9H0I3 AL137100.2-201ENST00000555786 315 ntBASIC2.95□□□□□ -1.94
CCDC113Q9H0I3 AL031274.2-201ENST00000599419 203 ntBASIC2.95□□□□□ -1.94
CCDC113Q9H0I3 RPL12P50-201ENST00000603116 116 ntBASIC2.95□□□□□ -1.94
CCDC113Q9H0I3 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.94□□□□□ -1.94
CCDC113Q9H0I3 Y_RNA.124-201ENST00000363339 93 ntBASIC2.94□□□□□ -1.94
CCDC113Q9H0I3 SNORD114-6-201ENST00000364393 72 ntBASIC2.94□□□□□ -1.94
CCDC113Q9H0I3 Y_RNA.269-201ENST00000364685 89 ntBASIC2.94□□□□□ -1.94
CCDC113Q9H0I3 MIR29C-201ENST00000385231 88 ntBASIC2.94□□□□□ -1.94
CCDC113Q9H0I3 RPL39P40-201ENST00000445481 146 ntBASIC2.94□□□□□ -1.94
CCDC113Q9H0I3 RNU1-131P-201ENST00000458943 161 ntBASIC2.94□□□□□ -1.94
CCDC113Q9H0I3 AC010409.1-201ENST00000487382 476 ntBASIC2.94□□□□□ -1.94
CCDC113Q9H0I3 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.94□□□□□ -1.94
CCDC113Q9H0I3 MIR4643-201ENST00000577473 78 ntBASIC2.94□□□□□ -1.94
CCDC113Q9H0I3 AC022202.1-201ENST00000613515 211 ntBASIC2.94□□□□□ -1.94
CCDC113Q9H0I3 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.94□□□□□ -1.94
CCDC113Q9H0I3 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.93□□□□□ -1.94
CCDC113Q9H0I3 CENPCP1-201ENST00000533085 2578 ntBASIC2.93□□□□□ -1.94
CCDC113Q9H0I3 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CCDC113Q9H0I3 Y_RNA.361-201ENST00000365515 120 ntBASIC2.93□□□□□ -1.94
CCDC113Q9H0I3 HMGN2P35-201ENST00000412164 270 ntBASIC2.93□□□□□ -1.94
CCDC113Q9H0I3 AC136628.3-201ENST00000521868 290 ntBASIC2.93□□□□□ -1.94
CCDC113Q9H0I3 U2.15-201ENST00000611544 191 ntBASIC2.93□□□□□ -1.94
CCDC113Q9H0I3 U2.16-201ENST00000613119 191 ntBASIC2.93□□□□□ -1.94
CCDC113Q9H0I3 U2.12-201ENST00000613778 191 ntBASIC2.93□□□□□ -1.94
CCDC113Q9H0I3 U2.20-201ENST00000613956 192 ntBASIC2.93□□□□□ -1.94
CCDC113Q9H0I3 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.93□□□□□ -1.94
CCDC113Q9H0I3 U2.9-201ENST00000615427 191 ntBASIC2.93□□□□□ -1.94
CCDC113Q9H0I3 U2.11-201ENST00000616345 191 ntBASIC2.93□□□□□ -1.94
CCDC113Q9H0I3 U2.2-201ENST00000616535 191 ntBASIC2.93□□□□□ -1.94
CCDC113Q9H0I3 U2.3-201ENST00000617785 191 ntBASIC2.93□□□□□ -1.94
CCDC113Q9H0I3 U2.19-201ENST00000618602 191 ntBASIC2.93□□□□□ -1.94
CCDC113Q9H0I3 RNU2-1-201ENST00000618664 191 ntBASIC2.93□□□□□ -1.94
CCDC113Q9H0I3 U2.6-201ENST00000619225 191 ntBASIC2.93□□□□□ -1.94
CCDC113Q9H0I3 U2.5-201ENST00000619465 191 ntBASIC2.93□□□□□ -1.94
CCDC113Q9H0I3 U2.10-201ENST00000620268 191 ntBASIC2.93□□□□□ -1.94
CCDC113Q9H0I3 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CCDC113Q9H0I3 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.93□□□□□ -1.94
CCDC113Q9H0I3 RNU6-23P-201ENST00000363283 107 ntBASIC2.92□□□□□ -1.94
CCDC113Q9H0I3 Y_RNA.122-201ENST00000363331 96 ntBASIC2.92□□□□□ -1.94
CCDC113Q9H0I3 RNA5SP393-201ENST00000363423 117 ntBASIC2.92□□□□□ -1.94
CCDC113Q9H0I3 Y_RNA.456-201ENST00000384232 111 ntBASIC2.92□□□□□ -1.94
CCDC113Q9H0I3 RNU6-417P-201ENST00000384712 107 ntBASIC2.92□□□□□ -1.94
CCDC113Q9H0I3 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.92□□□□□ -1.94
CCDC113Q9H0I3 HSPE1P21-201ENST00000438283 308 ntBASIC2.92□□□□□ -1.94
CCDC113Q9H0I3 HSPE1P13-201ENST00000451143 297 ntBASIC2.92□□□□□ -1.94
CCDC113Q9H0I3 RPS26P55-201ENST00000471178 356 ntBASIC2.92□□□□□ -1.94
CCDC113Q9H0I3 RN7SL297P-201ENST00000483161 293 ntBASIC2.92□□□□□ -1.94
CCDC113Q9H0I3 RNA5SP282-201ENST00000516355 108 ntBASIC2.92□□□□□ -1.94
CCDC113Q9H0I3 RNU6-1337P-201ENST00000516525 95 ntBASIC2.92□□□□□ -1.94
CCDC113Q9H0I3 SUMO2P18-201ENST00000518873 252 ntBASIC2.92□□□□□ -1.94
CCDC113Q9H0I3 MIR4438-201ENST00000585271 93 ntBASIC2.92□□□□□ -1.94
CCDC113Q9H0I3 snoU18.1-201ENST00000629629 71 ntBASIC2.92□□□□□ -1.94
CCDC113Q9H0I3 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CCDC113Q9H0I3 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CCDC113Q9H0I3 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.92□□□□□ -1.94
CCDC113Q9H0I3 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
CCDC113Q9H0I3 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
CCDC113Q9H0I3 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CCDC113Q9H0I3 RNA5SP493-201ENST00000364115 91 ntBASIC2.91□□□□□ -1.94
CCDC113Q9H0I3 Y_RNA.368-201ENST00000365547 113 ntBASIC2.91□□□□□ -1.94
CCDC113Q9H0I3 BTF3P11-201ENST00000426582 477 ntBASIC2.91□□□□□ -1.94
CCDC113Q9H0I3 CR769767.1-201ENST00000436337 346 ntBASIC2.91□□□□□ -1.94
CCDC113Q9H0I3 ATP5J2P3-201ENST00000451550 258 ntBASIC2.91□□□□□ -1.94
CCDC113Q9H0I3 UBE2DNL-203ENST00000474922 222 ntBASIC2.91□□□□□ -1.94
CCDC113Q9H0I3 RPS29P21-201ENST00000496272 170 ntBASIC2.91□□□□□ -1.94
CCDC113Q9H0I3 RN7SL636P-201ENST00000497504 294 ntBASIC2.91□□□□□ -1.94
CCDC113Q9H0I3 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC113Q9H0I3 Z82195.2-201ENST00000612348 18351 ntBASIC2.91□□□□□ -1.94
CCDC113Q9H0I3 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CCDC113Q9H0I3 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CCDC113Q9H0I3 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms