Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 Y_RNA.679-201ENST00000516416 91 ntBASIC2.96□□□□□ -1.94
TRIM55Q9BYV6 RNU6-1337P-201ENST00000516525 95 ntBASIC2.96□□□□□ -1.94
TRIM55Q9BYV6 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.96□□□□□ -1.94
TRIM55Q9BYV6 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.96□□□□□ -1.94
TRIM55Q9BYV6 MIR4282-201ENST00000583613 67 ntBASIC2.96□□□□□ -1.94
TRIM55Q9BYV6 AC009779.6-201ENST00000603972 165 ntBASIC2.96□□□□□ -1.94
TRIM55Q9BYV6 RNU6-23P-201ENST00000363283 107 ntBASIC2.95□□□□□ -1.94
TRIM55Q9BYV6 Y_RNA.172-201ENST00000363765 102 ntBASIC2.95□□□□□ -1.94
TRIM55Q9BYV6 RNU6-801P-201ENST00000364087 105 ntBASIC2.95□□□□□ -1.94
TRIM55Q9BYV6 Y_RNA.287-201ENST00000364853 94 ntBASIC2.95□□□□□ -1.94
TRIM55Q9BYV6 Y_RNA.341-201ENST00000365341 102 ntBASIC2.95□□□□□ -1.94
TRIM55Q9BYV6 Y_RNA.456-201ENST00000384232 111 ntBASIC2.95□□□□□ -1.94
TRIM55Q9BYV6 SNORA7.4-201ENST00000384249 137 ntBASIC2.95□□□□□ -1.94
TRIM55Q9BYV6 SNORD2.1-201ENST00000458762 69 ntBASIC2.95□□□□□ -1.94
TRIM55Q9BYV6 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.95□□□□□ -1.94
TRIM55Q9BYV6 RN7SL636P-201ENST00000497504 294 ntBASIC2.95□□□□□ -1.94
TRIM55Q9BYV6 AC136628.3-201ENST00000521868 290 ntBASIC2.95□□□□□ -1.94
TRIM55Q9BYV6 AL137100.2-201ENST00000555786 315 ntBASIC2.95□□□□□ -1.94
TRIM55Q9BYV6 MIR3169-201ENST00000578032 83 ntBASIC2.95□□□□□ -1.94
TRIM55Q9BYV6 MIR4438-201ENST00000585271 93 ntBASIC2.95□□□□□ -1.94
TRIM55Q9BYV6 AL353149.1-201ENST00000610667 244 ntBASIC2.95□□□□□ -1.94
TRIM55Q9BYV6 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.95□□□□□ -1.94
TRIM55Q9BYV6 AL161431.1-201ENST00000618966 4205 ntBASIC2.95□□□□□ -1.94
TRIM55Q9BYV6 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
TRIM55Q9BYV6 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
TRIM55Q9BYV6 AC073325.2-201ENST00000339545 159 ntBASIC2.94□□□□□ -1.94
TRIM55Q9BYV6 Y_RNA.310-201ENST00000365063 113 ntBASIC2.94□□□□□ -1.94
TRIM55Q9BYV6 RNU6-417P-201ENST00000384712 107 ntBASIC2.94□□□□□ -1.94
TRIM55Q9BYV6 RNU6-763P-201ENST00000390865 106 ntBASIC2.94□□□□□ -1.94
TRIM55Q9BYV6 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.94□□□□□ -1.94
TRIM55Q9BYV6 BTF3P11-201ENST00000426582 477 ntBASIC2.94□□□□□ -1.94
TRIM55Q9BYV6 ATP5J2P3-201ENST00000451550 258 ntBASIC2.94□□□□□ -1.94
TRIM55Q9BYV6 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.94□□□□□ -1.94
TRIM55Q9BYV6 MIR4672-201ENST00000583126 81 ntBASIC2.94□□□□□ -1.94
TRIM55Q9BYV6 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.94□□□□□ -1.94
TRIM55Q9BYV6 AC007318.2-201ENST00000620999 243 ntBASIC2.94□□□□□ -1.94
TRIM55Q9BYV6 snoU18.1-201ENST00000629629 71 ntBASIC2.94□□□□□ -1.94
TRIM55Q9BYV6 MIR338-201ENST00000636369 67 ntBASIC2.94□□□□□ -1.94
TRIM55Q9BYV6 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
TRIM55Q9BYV6 AL356292.1-201ENST00000283110 373 ntBASIC2.93□□□□□ -1.94
TRIM55Q9BYV6 RNU1-35P-201ENST00000362782 153 ntBASIC2.93□□□□□ -1.94
TRIM55Q9BYV6 SNORA54-201ENST00000384281 123 ntBASIC2.93□□□□□ -1.94
TRIM55Q9BYV6 SNORD116-13-201ENST00000384408 92 ntBASIC2.93□□□□□ -1.94
TRIM55Q9BYV6 SNORD67-201ENST00000390833 111 ntBASIC2.93□□□□□ -1.94
TRIM55Q9BYV6 SNORA26.5-201ENST00000391215 123 ntBASIC2.93□□□□□ -1.94
TRIM55Q9BYV6 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.93□□□□□ -1.94
TRIM55Q9BYV6 BX510359.4-201ENST00000423750 193 ntBASIC2.93□□□□□ -1.94
TRIM55Q9BYV6 AL109933.2-201ENST00000452651 260 ntBASIC2.93□□□□□ -1.94
TRIM55Q9BYV6 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.93□□□□□ -1.94
TRIM55Q9BYV6 AC097462.1-201ENST00000514125 324 ntBASIC2.93□□□□□ -1.94
TRIM55Q9BYV6 SNORD116-28-201ENST00000516123 91 ntBASIC2.93□□□□□ -1.94
TRIM55Q9BYV6 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.93□□□□□ -1.94
TRIM55Q9BYV6 AC006023.1-201ENST00000603944 259 ntBASIC2.93□□□□□ -1.94
TRIM55Q9BYV6 SNORD14A-201ENST00000606526 91 ntBASIC2.93□□□□□ -1.94
TRIM55Q9BYV6 AL008718.3-201ENST00000610217 321 ntBASIC2.93□□□□□ -1.94
TRIM55Q9BYV6 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.93□□□□□ -1.94
TRIM55Q9BYV6 AL078604.3-201ENST00000615580 211 ntBASIC2.93□□□□□ -1.94
TRIM55Q9BYV6 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.93□□□□□ -1.94
TRIM55Q9BYV6 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
TRIM55Q9BYV6 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.93□□□□□ -1.94
TRIM55Q9BYV6 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
TRIM55Q9BYV6 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
TRIM55Q9BYV6 RNU1-58P-201ENST00000362413 163 ntBASIC2.92□□□□□ -1.94
TRIM55Q9BYV6 RNU1-22P-201ENST00000363334 158 ntBASIC2.92□□□□□ -1.94
TRIM55Q9BYV6 RNU6-211P-201ENST00000384047 107 ntBASIC2.92□□□□□ -1.94
TRIM55Q9BYV6 SNORA72.4-201ENST00000384174 132 ntBASIC2.92□□□□□ -1.94
TRIM55Q9BYV6 RPS20P10-201ENST00000451209 253 ntBASIC2.92□□□□□ -1.94
TRIM55Q9BYV6 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.92□□□□□ -1.94
TRIM55Q9BYV6 Y_RNA.637-201ENST00000459424 114 ntBASIC2.92□□□□□ -1.94
TRIM55Q9BYV6 YWHAEP4-201ENST00000505390 198 ntBASIC2.92□□□□□ -1.94
TRIM55Q9BYV6 RNU6-63P-201ENST00000516690 95 ntBASIC2.92□□□□□ -1.94
TRIM55Q9BYV6 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.92□□□□□ -1.94
TRIM55Q9BYV6 U6.73-201ENST00000619194 103 ntBASIC2.92□□□□□ -1.94
TRIM55Q9BYV6 MIR622-201ENST00000638396 96 ntBASIC2.92□□□□□ -1.94
TRIM55Q9BYV6 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.92□□□□□ -1.94
TRIM55Q9BYV6 AC009487.2-201ENST00000420969 6821 ntBASIC2.92□□□□□ -1.94
TRIM55Q9BYV6 AL035425.3-201ENST00000564206 4996 ntBASIC2.92□□□□□ -1.94
TRIM55Q9BYV6 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.92□□□□□ -1.94
TRIM55Q9BYV6 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
TRIM55Q9BYV6 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
TRIM55Q9BYV6 RNU6-1048P-201ENST00000364054 107 ntBASIC2.91□□□□□ -1.94
TRIM55Q9BYV6 Y_RNA.292-201ENST00000364904 97 ntBASIC2.91□□□□□ -1.94
TRIM55Q9BYV6 RNU6-117P-201ENST00000365415 107 ntBASIC2.91□□□□□ -1.94
TRIM55Q9BYV6 MIR181A2-201ENST00000384863 110 ntBASIC2.91□□□□□ -1.94
TRIM55Q9BYV6 AL117342.1-201ENST00000404861 406 ntBASIC2.91□□□□□ -1.94
TRIM55Q9BYV6 AL139156.1-201ENST00000412785 841 ntBASIC2.91□□□□□ -1.94
TRIM55Q9BYV6 AC010154.1-201ENST00000425857 269 ntBASIC2.91□□□□□ -1.94
TRIM55Q9BYV6 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.91□□□□□ -1.94
TRIM55Q9BYV6 Y_RNA.638-201ENST00000459374 113 ntBASIC2.91□□□□□ -1.94
TRIM55Q9BYV6 RN7SL297P-201ENST00000483161 293 ntBASIC2.91□□□□□ -1.94
TRIM55Q9BYV6 AC004832.4-201ENST00000608952 331 ntBASIC2.91□□□□□ -1.94
TRIM55Q9BYV6 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
TRIM55Q9BYV6 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
TRIM55Q9BYV6 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.9□□□□□ -1.94
TRIM55Q9BYV6 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
TRIM55Q9BYV6 Z82195.2-201ENST00000612348 18351 ntBASIC2.9□□□□□ -1.94
TRIM55Q9BYV6 VTRNA1-1-201ENST00000363120 99 ntBASIC2.9□□□□□ -1.95
TRIM55Q9BYV6 SNORA71.1-201ENST00000364523 117 ntBASIC2.9□□□□□ -1.95
TRIM55Q9BYV6 MTND5P15-201ENST00000434246 349 ntBASIC2.9□□□□□ -1.95
TRIM55Q9BYV6 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms