Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AC117522.1-201ENST00000509821 380 ntBASIC-0.89□□□□□ -2.55
SCAPERQ9BY12 RNU7-43P-201ENST00000516554 64 ntBASIC-0.89□□□□□ -2.55
SCAPERQ9BY12 AC104383.1-201ENST00000530297 370 ntBASIC-0.89□□□□□ -2.55
SCAPERQ9BY12 MIR4676-201ENST00000583078 72 ntBASIC-0.89□□□□□ -2.55
SCAPERQ9BY12 AC012433.1-201ENST00000588916 398 ntBASIC-0.89□□□□□ -2.55
SCAPERQ9BY12 MTATP6P2-201ENST00000603319 678 ntBASIC-0.89□□□□□ -2.55
SCAPERQ9BY12 AC246785.4-201ENST00000605374 287 ntBASIC-0.89□□□□□ -2.55
SCAPERQ9BY12 AC026741.1-201ENST00000605892 482 ntBASIC-0.89□□□□□ -2.55
SCAPERQ9BY12 AC016911.1-201ENST00000613297 452 ntBASIC-0.89□□□□□ -2.55
SCAPERQ9BY12 MIR4788-201ENST00000639104 80 ntBASIC-0.89□□□□□ -2.55
SCAPERQ9BY12 AC073343.1-201ENST00000328239 651 ntBASIC-0.89□□□□□ -2.55
SCAPERQ9BY12 SNORD14.1-201ENST00000365609 90 ntBASIC-0.89□□□□□ -2.55
SCAPERQ9BY12 MIR452-201ENST00000385020 85 ntBASIC-0.89□□□□□ -2.55
SCAPERQ9BY12 MTCO2P23-201ENST00000425216 680 ntBASIC-0.89□□□□□ -2.55
SCAPERQ9BY12 RPS24P1-201ENST00000438550 371 ntBASIC-0.89□□□□□ -2.55
SCAPERQ9BY12 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC-0.89□□□□□ -2.55
SCAPERQ9BY12 RNU6-1037P-201ENST00000459571 107 ntBASIC-0.89□□□□□ -2.55
SCAPERQ9BY12 MIR4771-2-201ENST00000577758 74 ntBASIC-0.89□□□□□ -2.55
SCAPERQ9BY12 MIR4771-1-201ENST00000582617 74 ntBASIC-0.89□□□□□ -2.55
SCAPERQ9BY12 AL078596.1-201ENST00000624856 447 ntBASIC-0.89□□□□□ -2.55
SCAPERQ9BY12 RNU6-207P-201ENST00000384137 107 ntBASIC-0.9□□□□□ -2.55
SCAPERQ9BY12 MLLT10P1-201ENST00000418346 262 ntBASIC-0.9□□□□□ -2.55
SCAPERQ9BY12 AC007215.1-201ENST00000464893 276 ntBASIC-0.9□□□□□ -2.55
SCAPERQ9BY12 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC-0.9□□□□□ -2.55
SCAPERQ9BY12 RNU6-63P-201ENST00000516690 95 ntBASIC-0.9□□□□□ -2.55
SCAPERQ9BY12 RNU6-180P-201ENST00000516697 61 ntBASIC-0.9□□□□□ -2.55
SCAPERQ9BY12 MTND2P38-201ENST00000522536 667 ntBASIC-0.9□□□□□ -2.55
SCAPERQ9BY12 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.9□□□□□ -2.55
SCAPERQ9BY12 AC100830.2-201ENST00000581636 240 ntBASIC-0.9□□□□□ -2.55
SCAPERQ9BY12 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC-0.9□□□□□ -2.55
SCAPERQ9BY12 RNU6-161P-201ENST00000363051 106 ntBASIC-0.91□□□□□ -2.56
SCAPERQ9BY12 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.91□□□□□ -2.56
SCAPERQ9BY12 ZNF204P-201ENST00000416749 2397 ntBASIC-0.91□□□□□ -2.56
SCAPERQ9BY12 TRIM60P10Y-201ENST00000425589 751 ntBASIC-0.91□□□□□ -2.56
SCAPERQ9BY12 RPL39P34-201ENST00000477141 156 ntBASIC-0.91□□□□□ -2.56
SCAPERQ9BY12 RNU6-551P-201ENST00000516661 103 ntBASIC-0.91□□□□□ -2.56
SCAPERQ9BY12 RNU6-58P-201ENST00000517143 103 ntBASIC-0.91□□□□□ -2.56
SCAPERQ9BY12 RNU6-1116P-201ENST00000517269 99 ntBASIC-0.91□□□□□ -2.56
SCAPERQ9BY12 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC-0.91□□□□□ -2.56
SCAPERQ9BY12 LRRC34P1-201ENST00000542742 915 ntBASIC-0.91□□□□□ -2.56
SCAPERQ9BY12 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-0.91□□□□□ -2.56
SCAPERQ9BY12 AL596327.1-201ENST00000603629 213 ntBASIC-0.91□□□□□ -2.56
SCAPERQ9BY12 AC027279.3-201ENST00000625055 122 ntBASIC-0.91□□□□□ -2.56
SCAPERQ9BY12 SNORA43.4-201ENST00000629559 138 ntBASIC-0.91□□□□□ -2.56
SCAPERQ9BY12 RNU6-396P-201ENST00000365369 105 ntBASIC-0.92□□□□□ -2.56
SCAPERQ9BY12 RNU6-354P-201ENST00000383862 107 ntBASIC-0.92□□□□□ -2.56
SCAPERQ9BY12 RNU6-610P-201ENST00000384264 107 ntBASIC-0.92□□□□□ -2.56
SCAPERQ9BY12 SNORA67.2-201ENST00000384300 149 ntBASIC-0.92□□□□□ -2.56
SCAPERQ9BY12 AL355143.1-201ENST00000407101 841 ntBASIC-0.92□□□□□ -2.56
SCAPERQ9BY12 RNU4-30P-201ENST00000410245 143 ntBASIC-0.92□□□□□ -2.56
SCAPERQ9BY12 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC-0.92□□□□□ -2.56
SCAPERQ9BY12 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-0.92□□□□□ -2.56
SCAPERQ9BY12 RNA5SP216-201ENST00000516111 123 ntBASIC-0.92□□□□□ -2.56
SCAPERQ9BY12 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC-0.92□□□□□ -2.56
SCAPERQ9BY12 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC-0.92□□□□□ -2.56
SCAPERQ9BY12 AC133485.4-201ENST00000561835 220 ntBASIC-0.92□□□□□ -2.56
SCAPERQ9BY12 AC138869.1-201ENST00000568623 124 ntBASIC-0.92□□□□□ -2.56
SCAPERQ9BY12 AC012467.1-201ENST00000607740 256 ntBASIC-0.92□□□□□ -2.56
SCAPERQ9BY12 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC-0.92□□□□□ -2.56
SCAPERQ9BY12 uc_338.28-201ENST00000612082 187 ntBASIC-0.92□□□□□ -2.56
SCAPERQ9BY12 AL445523.1-201ENST00000451184 1362 ntBASIC-0.93□□□□□ -2.56
SCAPERQ9BY12 RNU6-462P-201ENST00000362659 105 ntBASIC-0.93□□□□□ -2.56
SCAPERQ9BY12 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-0.93□□□□□ -2.56
SCAPERQ9BY12 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.93□□□□□ -2.56
SCAPERQ9BY12 RNA5SP118-201ENST00000410385 109 ntBASIC-0.93□□□□□ -2.56
SCAPERQ9BY12 MTCO3P8-201ENST00000453691 755 ntBASIC-0.93□□□□□ -2.56
SCAPERQ9BY12 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC-0.93□□□□□ -2.56
SCAPERQ9BY12 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.93□□□□□ -2.56
SCAPERQ9BY12 RNU7-51P-201ENST00000516560 62 ntBASIC-0.93□□□□□ -2.56
SCAPERQ9BY12 AC023050.3-201ENST00000541142 333 ntBASIC-0.93□□□□□ -2.56
SCAPERQ9BY12 AC073539.2-201ENST00000597113 165 ntBASIC-0.93□□□□□ -2.56
SCAPERQ9BY12 AP000907.4-201ENST00000604143 237 ntBASIC-0.93□□□□□ -2.56
SCAPERQ9BY12 AC020891.4-201ENST00000605745 93 ntBASIC-0.93□□□□□ -2.56
SCAPERQ9BY12 AL162726.3-218ENST00000636401 95 ntBASIC-0.93□□□□□ -2.56
SCAPERQ9BY12 RNU6-187P-201ENST00000384139 106 ntBASIC-0.94□□□□□ -2.56
SCAPERQ9BY12 AC004866.1-201ENST00000411748 78 ntBASIC-0.94□□□□□ -2.56
SCAPERQ9BY12 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC-0.94□□□□□ -2.56
SCAPERQ9BY12 AP002004.2-201ENST00000531656 154 ntBASIC-0.94□□□□□ -2.56
SCAPERQ9BY12 MIR4263-201ENST00000584745 83 ntBASIC-0.94□□□□□ -2.56
SCAPERQ9BY12 RNY1P7-201ENST00000384743 110 ntBASIC-0.95□□□□□ -2.56
SCAPERQ9BY12 MIR136-201ENST00000385207 82 ntBASIC-0.95□□□□□ -2.56
SCAPERQ9BY12 MIR1298-201ENST00000408783 112 ntBASIC-0.95□□□□□ -2.56
SCAPERQ9BY12 AC114491.1-201ENST00000416095 246 ntBASIC-0.95□□□□□ -2.56
SCAPERQ9BY12 AC098592.1-201ENST00000419352 333 ntBASIC-0.95□□□□□ -2.56
SCAPERQ9BY12 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC-0.95□□□□□ -2.56
SCAPERQ9BY12 CALM2P2-201ENST00000428512 440 ntBASIC-0.95□□□□□ -2.56
SCAPERQ9BY12 AC015818.7-201ENST00000428754 109 ntBASIC-0.95□□□□□ -2.56
SCAPERQ9BY12 AC087499.7-201ENST00000441958 109 ntBASIC-0.95□□□□□ -2.56
SCAPERQ9BY12 AC079781.2-201ENST00000446424 169 ntBASIC-0.95□□□□□ -2.56
SCAPERQ9BY12 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC-0.95□□□□□ -2.56
SCAPERQ9BY12 RNU6-341P-201ENST00000516973 96 ntBASIC-0.95□□□□□ -2.56
SCAPERQ9BY12 MIR4438-201ENST00000585271 93 ntBASIC-0.95□□□□□ -2.56
SCAPERQ9BY12 MIR7107-201ENST00000611489 80 ntBASIC-0.95□□□□□ -2.56
SCAPERQ9BY12 AC078880.5-201ENST00000617845 421 ntBASIC-0.95□□□□□ -2.56
SCAPERQ9BY12 MIR4251-201ENST00000635819 61 ntBASIC-0.95□□□□□ -2.56
SCAPERQ9BY12 SNORA1B-201ENST00000362535 133 ntBASIC-0.96□□□□□ -2.56
SCAPERQ9BY12 RNU6-137P-201ENST00000363680 108 ntBASIC-0.96□□□□□ -2.56
SCAPERQ9BY12 Y_RNA.192-201ENST00000363977 102 ntBASIC-0.96□□□□□ -2.56
SCAPERQ9BY12 SNORA26-201ENST00000391286 122 ntBASIC-0.96□□□□□ -2.56
SCAPERQ9BY12 Z98949.2-201ENST00000440996 144 ntBASIC-0.96□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms