Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 Y_RNA.105-201ENST00000363182 111 ntBASIC2.27□□□□□ -2.05
PAAF1Q9BRP4 Y_RNA.133-201ENST00000363428 110 ntBASIC2.27□□□□□ -2.05
PAAF1Q9BRP4 RNU6-454P-201ENST00000364292 107 ntBASIC2.27□□□□□ -2.05
PAAF1Q9BRP4 RNU6-1240P-201ENST00000365155 104 ntBASIC2.27□□□□□ -2.05
PAAF1Q9BRP4 Y_RNA.446-201ENST00000384178 104 ntBASIC2.27□□□□□ -2.05
PAAF1Q9BRP4 SNORA40.19-201ENST00000390846 128 ntBASIC2.27□□□□□ -2.05
PAAF1Q9BRP4 RNU2-54P-201ENST00000410299 190 ntBASIC2.27□□□□□ -2.05
PAAF1Q9BRP4 RPL21P38-201ENST00000418090 167 ntBASIC2.27□□□□□ -2.05
PAAF1Q9BRP4 AC096920.1-201ENST00000423991 241 ntBASIC2.27□□□□□ -2.05
PAAF1Q9BRP4 AL591806.2-201ENST00000433122 173 ntBASIC2.27□□□□□ -2.05
PAAF1Q9BRP4 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
PAAF1Q9BRP4 AC098869.1-201ENST00000481627 292 ntBASIC2.27□□□□□ -2.05
PAAF1Q9BRP4 MTCO2P24-201ENST00000515611 426 ntBASIC2.27□□□□□ -2.05
PAAF1Q9BRP4 SNORA31.15-201ENST00000516771 132 ntBASIC2.27□□□□□ -2.05
PAAF1Q9BRP4 RNU6-570P-201ENST00000517051 105 ntBASIC2.27□□□□□ -2.05
PAAF1Q9BRP4 AC027419.1-201ENST00000522976 328 ntBASIC2.27□□□□□ -2.05
PAAF1Q9BRP4 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.27□□□□□ -2.05
PAAF1Q9BRP4 MIR3684-201ENST00000579779 74 ntBASIC2.27□□□□□ -2.05
PAAF1Q9BRP4 AC022441.3-201ENST00000605737 136 ntBASIC2.27□□□□□ -2.05
PAAF1Q9BRP4 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.27□□□□□ -2.05
PAAF1Q9BRP4 AL137847.3-201ENST00000611521 109 ntBASIC2.27□□□□□ -2.05
PAAF1Q9BRP4 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.27□□□□□ -2.05
PAAF1Q9BRP4 AL590240.4-201ENST00000616908 390 ntBASIC2.27□□□□□ -2.05
PAAF1Q9BRP4 MIR6132-201ENST00000622083 109 ntBASIC2.27□□□□□ -2.05
PAAF1Q9BRP4 U6.104-201ENST00000637979 90 ntBASIC2.27□□□□□ -2.05
PAAF1Q9BRP4 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
PAAF1Q9BRP4 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.26□□□□□ -2.05
PAAF1Q9BRP4 RNU4-90P-201ENST00000362773 141 ntBASIC2.26□□□□□ -2.05
PAAF1Q9BRP4 SNORD114-6-201ENST00000364393 72 ntBASIC2.26□□□□□ -2.05
PAAF1Q9BRP4 MIR1302-6-201ENST00000408466 90 ntBASIC2.26□□□□□ -2.05
PAAF1Q9BRP4 RNU6-121P-201ENST00000410525 99 ntBASIC2.26□□□□□ -2.05
PAAF1Q9BRP4 AL139156.1-201ENST00000412785 841 ntBASIC2.26□□□□□ -2.05
PAAF1Q9BRP4 SUMO1P4-201ENST00000429430 302 ntBASIC2.26□□□□□ -2.05
PAAF1Q9BRP4 MTCYBP9-201ENST00000431021 303 ntBASIC2.26□□□□□ -2.05
PAAF1Q9BRP4 AL445646.1-201ENST00000431784 216 ntBASIC2.26□□□□□ -2.05
PAAF1Q9BRP4 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.26□□□□□ -2.05
PAAF1Q9BRP4 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.26□□□□□ -2.05
PAAF1Q9BRP4 AC107222.1-201ENST00000510899 637 ntBASIC2.26□□□□□ -2.05
PAAF1Q9BRP4 RNU6-1146P-201ENST00000516282 102 ntBASIC2.26□□□□□ -2.05
PAAF1Q9BRP4 RNU6-856P-201ENST00000516959 98 ntBASIC2.26□□□□□ -2.05
PAAF1Q9BRP4 AC025647.1-201ENST00000517879 253 ntBASIC2.26□□□□□ -2.05
PAAF1Q9BRP4 AP005660.1-201ENST00000522972 293 ntBASIC2.26□□□□□ -2.05
PAAF1Q9BRP4 AC087441.2-201ENST00000529141 262 ntBASIC2.26□□□□□ -2.05
PAAF1Q9BRP4 MIR4446-201ENST00000578505 67 ntBASIC2.26□□□□□ -2.05
PAAF1Q9BRP4 MIR4524B-201ENST00000581569 115 ntBASIC2.26□□□□□ -2.05
PAAF1Q9BRP4 AC008749.1-201ENST00000597650 306 ntBASIC2.26□□□□□ -2.05
PAAF1Q9BRP4 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.26□□□□□ -2.05
PAAF1Q9BRP4 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
PAAF1Q9BRP4 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
PAAF1Q9BRP4 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
PAAF1Q9BRP4 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
PAAF1Q9BRP4 RNU6-1164P-201ENST00000364428 107 ntBASIC2.25□□□□□ -2.05
PAAF1Q9BRP4 RNU6-196P-201ENST00000384315 107 ntBASIC2.25□□□□□ -2.05
PAAF1Q9BRP4 RNU11-3P-201ENST00000391111 133 ntBASIC2.25□□□□□ -2.05
PAAF1Q9BRP4 HMGN2P34-201ENST00000437647 269 ntBASIC2.25□□□□□ -2.05
PAAF1Q9BRP4 POLR2KP2-201ENST00000438155 177 ntBASIC2.25□□□□□ -2.05
PAAF1Q9BRP4 RNU1-131P-201ENST00000458943 161 ntBASIC2.25□□□□□ -2.05
PAAF1Q9BRP4 AC025465.3-201ENST00000510570 311 ntBASIC2.25□□□□□ -2.05
PAAF1Q9BRP4 RNU6-1041P-201ENST00000516254 102 ntBASIC2.25□□□□□ -2.05
PAAF1Q9BRP4 SUMO2P18-201ENST00000518873 252 ntBASIC2.25□□□□□ -2.05
PAAF1Q9BRP4 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.25□□□□□ -2.05
PAAF1Q9BRP4 MIR4423-201ENST00000580922 80 ntBASIC2.25□□□□□ -2.05
PAAF1Q9BRP4 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.25□□□□□ -2.05
PAAF1Q9BRP4 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.25□□□□□ -2.05
PAAF1Q9BRP4 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
PAAF1Q9BRP4 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
PAAF1Q9BRP4 AL356292.1-201ENST00000283110 373 ntBASIC2.24□□□□□ -2.05
PAAF1Q9BRP4 MIR340-201ENST00000362125 95 ntBASIC2.24□□□□□ -2.05
PAAF1Q9BRP4 SNORA3A-201ENST00000364113 130 ntBASIC2.24□□□□□ -2.05
PAAF1Q9BRP4 RNA5SP493-201ENST00000364115 91 ntBASIC2.24□□□□□ -2.05
PAAF1Q9BRP4 Y_RNA.461-201ENST00000384263 103 ntBASIC2.24□□□□□ -2.05
PAAF1Q9BRP4 MIR524-201ENST00000385242 87 ntBASIC2.24□□□□□ -2.05
PAAF1Q9BRP4 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.24□□□□□ -2.05
PAAF1Q9BRP4 AC060773.1-201ENST00000421698 310 ntBASIC2.24□□□□□ -2.05
PAAF1Q9BRP4 BX510359.4-201ENST00000423750 193 ntBASIC2.24□□□□□ -2.05
PAAF1Q9BRP4 ATP5J2P3-201ENST00000451550 258 ntBASIC2.24□□□□□ -2.05
PAAF1Q9BRP4 RPL23AP3-201ENST00000453844 468 ntBASIC2.24□□□□□ -2.05
PAAF1Q9BRP4 RNU2-12P-201ENST00000517216 168 ntBASIC2.24□□□□□ -2.05
PAAF1Q9BRP4 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.24□□□□□ -2.05
PAAF1Q9BRP4 MIR4769-201ENST00000584126 77 ntBASIC2.24□□□□□ -2.05
PAAF1Q9BRP4 AC037487.3-201ENST00000606668 112 ntBASIC2.24□□□□□ -2.05
PAAF1Q9BRP4 Y_RNA.783-201ENST00000613546 102 ntBASIC2.24□□□□□ -2.05
PAAF1Q9BRP4 SDR42E1P4-201ENST00000620894 481 ntBASIC2.24□□□□□ -2.05
PAAF1Q9BRP4 MIR8062-201ENST00000621515 85 ntBASIC2.24□□□□□ -2.05
PAAF1Q9BRP4 AC010297.1-201ENST00000623948 149 ntBASIC2.24□□□□□ -2.05
PAAF1Q9BRP4 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.24□□□□□ -2.05
PAAF1Q9BRP4 U6.115-201ENST00000636045 103 ntBASIC2.24□□□□□ -2.05
PAAF1Q9BRP4 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.24□□□□□ -2.05
PAAF1Q9BRP4 RNU1-58P-201ENST00000362413 163 ntBASIC2.23□□□□□ -2.05
PAAF1Q9BRP4 MIR215-201ENST00000384858 110 ntBASIC2.23□□□□□ -2.05
PAAF1Q9BRP4 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.23□□□□□ -2.05
PAAF1Q9BRP4 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.23□□□□□ -2.05
PAAF1Q9BRP4 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.23□□□□□ -2.05
PAAF1Q9BRP4 snoU13.23-201ENST00000458863 104 ntBASIC2.23□□□□□ -2.05
PAAF1Q9BRP4 SNORD65B-201ENST00000459126 73 ntBASIC2.23□□□□□ -2.05
PAAF1Q9BRP4 HMGB3P17-201ENST00000504195 649 ntBASIC2.23□□□□□ -2.05
PAAF1Q9BRP4 AC010598.1-201ENST00000510378 103 ntBASIC2.23□□□□□ -2.05
PAAF1Q9BRP4 AC011406.1-201ENST00000512440 370 ntBASIC2.23□□□□□ -2.05
PAAF1Q9BRP4 RNU1-104P-201ENST00000517280 175 ntBASIC2.23□□□□□ -2.05
PAAF1Q9BRP4 MIR5002-201ENST00000584713 97 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms