Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 MTCO3P19-201ENST00000415864 321 ntBASIC-0.52□□□□□ -2.49
VPS25Q9BRG1 PDCL2P1-201ENST00000419302 352 ntBASIC-0.52□□□□□ -2.49
VPS25Q9BRG1 BTF3P11-201ENST00000426582 477 ntBASIC-0.52□□□□□ -2.49
VPS25Q9BRG1 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC-0.52□□□□□ -2.49
VPS25Q9BRG1 EPS15P1-201ENST00000448836 336 ntBASIC-0.52□□□□□ -2.49
VPS25Q9BRG1 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC-0.52□□□□□ -2.49
VPS25Q9BRG1 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.52□□□□□ -2.49
VPS25Q9BRG1 SNORD4A-201ENST00000459174 72 ntBASIC-0.52□□□□□ -2.49
VPS25Q9BRG1 AC091885.1-201ENST00000506658 268 ntBASIC-0.52□□□□□ -2.49
VPS25Q9BRG1 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.52□□□□□ -2.49
VPS25Q9BRG1 AC090897.1-201ENST00000580909 226 ntBASIC-0.52□□□□□ -2.49
VPS25Q9BRG1 MIR7107-201ENST00000611489 80 ntBASIC-0.52□□□□□ -2.49
VPS25Q9BRG1 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC-0.52□□□□□ -2.49
VPS25Q9BRG1 RNA5SP275-201ENST00000363936 118 ntBASIC-0.53□□□□□ -2.49
VPS25Q9BRG1 SNORD114-12-201ENST00000365400 75 ntBASIC-0.53□□□□□ -2.49
VPS25Q9BRG1 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.53□□□□□ -2.49
VPS25Q9BRG1 SNORA20.2-201ENST00000383922 131 ntBASIC-0.53□□□□□ -2.49
VPS25Q9BRG1 RNU6-1127P-201ENST00000384580 107 ntBASIC-0.53□□□□□ -2.49
VPS25Q9BRG1 AL049545.1-201ENST00000401856 572 ntBASIC-0.53□□□□□ -2.49
VPS25Q9BRG1 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC-0.53□□□□□ -2.49
VPS25Q9BRG1 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-0.53□□□□□ -2.49
VPS25Q9BRG1 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC-0.53□□□□□ -2.49
VPS25Q9BRG1 SNRPGP9-201ENST00000456025 225 ntBASIC-0.53□□□□□ -2.49
VPS25Q9BRG1 RPS29P15-201ENST00000458329 171 ntBASIC-0.53□□□□□ -2.49
VPS25Q9BRG1 RNU7-159P-201ENST00000459284 62 ntBASIC-0.53□□□□□ -2.49
VPS25Q9BRG1 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC-0.53□□□□□ -2.49
VPS25Q9BRG1 MTND2P32-201ENST00000521584 1038 ntBASIC-0.53□□□□□ -2.49
VPS25Q9BRG1 AC010376.1-201ENST00000522101 334 ntBASIC-0.53□□□□□ -2.49
VPS25Q9BRG1 MTND1P8-201ENST00000571424 950 ntBASIC-0.53□□□□□ -2.49
VPS25Q9BRG1 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC-0.53□□□□□ -2.49
VPS25Q9BRG1 AC005771.1-201ENST00000585581 349 ntBASIC-0.53□□□□□ -2.49
VPS25Q9BRG1 uc_338.6-201ENST00000613544 171 ntBASIC-0.53□□□□□ -2.49
VPS25Q9BRG1 AL607023.1-201ENST00000620045 248 ntBASIC-0.53□□□□□ -2.49
VPS25Q9BRG1 MIR330-201ENST00000362196 94 ntBASIC-0.54□□□□□ -2.5
VPS25Q9BRG1 RNU6-580P-201ENST00000365159 107 ntBASIC-0.54□□□□□ -2.5
VPS25Q9BRG1 Y_RNA.376-201ENST00000365638 108 ntBASIC-0.54□□□□□ -2.5
VPS25Q9BRG1 RNU6-434P-201ENST00000384376 107 ntBASIC-0.54□□□□□ -2.5
VPS25Q9BRG1 RNY1P4-201ENST00000384595 115 ntBASIC-0.54□□□□□ -2.5
VPS25Q9BRG1 RNU6-136P-201ENST00000384663 107 ntBASIC-0.54□□□□□ -2.5
VPS25Q9BRG1 Y_RNA.608-201ENST00000410647 95 ntBASIC-0.54□□□□□ -2.5
VPS25Q9BRG1 RNU5A-5P-201ENST00000411054 116 ntBASIC-0.54□□□□□ -2.5
VPS25Q9BRG1 AC096531.1-201ENST00000419107 107 ntBASIC-0.54□□□□□ -2.5
VPS25Q9BRG1 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-0.54□□□□□ -2.5
VPS25Q9BRG1 AL358176.2-201ENST00000425769 204 ntBASIC-0.54□□□□□ -2.5
VPS25Q9BRG1 AC104850.1-201ENST00000435940 476 ntBASIC-0.54□□□□□ -2.5
VPS25Q9BRG1 MTND1P26-201ENST00000440488 538 ntBASIC-0.54□□□□□ -2.5
VPS25Q9BRG1 MTCO2P3-201ENST00000442543 421 ntBASIC-0.54□□□□□ -2.5
VPS25Q9BRG1 RNU6-1037P-201ENST00000459571 107 ntBASIC-0.54□□□□□ -2.5
VPS25Q9BRG1 SCARNA8-201ENST00000515924 131 ntBASIC-0.54□□□□□ -2.5
VPS25Q9BRG1 RN7SKP287-201ENST00000516546 266 ntBASIC-0.54□□□□□ -2.5
VPS25Q9BRG1 RNA5SP268-201ENST00000516828 124 ntBASIC-0.54□□□□□ -2.5
VPS25Q9BRG1 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC-0.54□□□□□ -2.5
VPS25Q9BRG1 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.54□□□□□ -2.5
VPS25Q9BRG1 MTND5P17-201ENST00000418405 1603 ntBASIC-0.55□□□□□ -2.5
VPS25Q9BRG1 Y_RNA.4-201ENST00000362333 112 ntBASIC-0.55□□□□□ -2.5
VPS25Q9BRG1 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.55□□□□□ -2.5
VPS25Q9BRG1 RNU6-396P-201ENST00000365369 105 ntBASIC-0.55□□□□□ -2.5
VPS25Q9BRG1 Y_RNA.354-201ENST00000365448 111 ntBASIC-0.55□□□□□ -2.5
VPS25Q9BRG1 RNU6-1029P-201ENST00000384109 107 ntBASIC-0.55□□□□□ -2.5
VPS25Q9BRG1 MIR598-201ENST00000384868 97 ntBASIC-0.55□□□□□ -2.5
VPS25Q9BRG1 MIR106A-201ENST00000384870 81 ntBASIC-0.55□□□□□ -2.5
VPS25Q9BRG1 MIR193B-201ENST00000384907 83 ntBASIC-0.55□□□□□ -2.5
VPS25Q9BRG1 RNU6-1242P-201ENST00000391052 103 ntBASIC-0.55□□□□□ -2.5
VPS25Q9BRG1 MIR938-201ENST00000401216 83 ntBASIC-0.55□□□□□ -2.5
VPS25Q9BRG1 MIR320B2-201ENST00000408479 138 ntBASIC-0.55□□□□□ -2.5
VPS25Q9BRG1 RNU2-54P-201ENST00000410299 190 ntBASIC-0.55□□□□□ -2.5
VPS25Q9BRG1 MTATP6P20-201ENST00000414147 562 ntBASIC-0.55□□□□□ -2.5
VPS25Q9BRG1 MTND4P18-201ENST00000447010 465 ntBASIC-0.55□□□□□ -2.5
VPS25Q9BRG1 AC079354.2-201ENST00000453523 154 ntBASIC-0.55□□□□□ -2.5
VPS25Q9BRG1 RNU7-102P-201ENST00000458948 62 ntBASIC-0.55□□□□□ -2.5
VPS25Q9BRG1 AC018710.1-201ENST00000506509 158 ntBASIC-0.55□□□□□ -2.5
VPS25Q9BRG1 AL355375.2-201ENST00000574825 175 ntBASIC-0.55□□□□□ -2.5
VPS25Q9BRG1 MIR4775-201ENST00000581168 75 ntBASIC-0.55□□□□□ -2.5
VPS25Q9BRG1 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC-0.55□□□□□ -2.5
VPS25Q9BRG1 RNU6-407P-201ENST00000365280 104 ntBASIC-0.56□□□□□ -2.5
VPS25Q9BRG1 SNORA20B-201ENST00000384220 132 ntBASIC-0.56□□□□□ -2.5
VPS25Q9BRG1 MIR562-201ENST00000384894 95 ntBASIC-0.56□□□□□ -2.5
VPS25Q9BRG1 MIR454-201ENST00000390180 115 ntBASIC-0.56□□□□□ -2.5
VPS25Q9BRG1 MIR1197-201ENST00000408818 88 ntBASIC-0.56□□□□□ -2.5
VPS25Q9BRG1 AC018865.2-201ENST00000423631 129 ntBASIC-0.56□□□□□ -2.5
VPS25Q9BRG1 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.56□□□□□ -2.5
VPS25Q9BRG1 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.56□□□□□ -2.5
VPS25Q9BRG1 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC-0.56□□□□□ -2.5
VPS25Q9BRG1 RPL17P19-201ENST00000489069 552 ntBASIC-0.56□□□□□ -2.5
VPS25Q9BRG1 AC010598.1-201ENST00000510378 103 ntBASIC-0.56□□□□□ -2.5
VPS25Q9BRG1 RNU6-237P-201ENST00000515985 71 ntBASIC-0.56□□□□□ -2.5
VPS25Q9BRG1 AC105185.1-201ENST00000518705 535 ntBASIC-0.56□□□□□ -2.5
VPS25Q9BRG1 AC090572.1-201ENST00000519251 160 ntBASIC-0.56□□□□□ -2.5
VPS25Q9BRG1 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-0.56□□□□□ -2.5
VPS25Q9BRG1 MIR548AR-201ENST00000582191 57 ntBASIC-0.56□□□□□ -2.5
VPS25Q9BRG1 AC087683.1-201ENST00000591187 441 ntBASIC-0.56□□□□□ -2.5
VPS25Q9BRG1 Z94722.1-201ENST00000604328 474 ntBASIC-0.56□□□□□ -2.5
VPS25Q9BRG1 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-0.56□□□□□ -2.5
VPS25Q9BRG1 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.56□□□□□ -2.5
VPS25Q9BRG1 AC091948.2-201ENST00000636510 279 ntBASIC-0.56□□□□□ -2.5
VPS25Q9BRG1 RNA5SP432-201ENST00000362480 116 ntBASIC-0.57□□□□□ -2.5
VPS25Q9BRG1 RNU5F-6P-201ENST00000362979 116 ntBASIC-0.57□□□□□ -2.5
VPS25Q9BRG1 SNORA1.1-201ENST00000364671 133 ntBASIC-0.57□□□□□ -2.5
VPS25Q9BRG1 RNU6-716P-201ENST00000365621 103 ntBASIC-0.57□□□□□ -2.5
VPS25Q9BRG1 AC117470.1-201ENST00000381974 330 ntBASIC-0.57□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms