Protein–RNA interactions for Protein: Q9BQY4

RHOXF2, Rhox homeobox family member 2, humanhuman

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF2Q9BQY4 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.91□□□□□ -2.26
RHOXF2Q9BQY4 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
RHOXF2Q9BQY4 U3.8-201ENST00000363675 217 ntBASIC0.9□□□□□ -2.27
RHOXF2Q9BQY4 RNU6-1059P-201ENST00000363752 98 ntBASIC0.9□□□□□ -2.27
RHOXF2Q9BQY4 SNORD114-2-201ENST00000363953 78 ntBASIC0.9□□□□□ -2.27
RHOXF2Q9BQY4 RNU6-1240P-201ENST00000365155 104 ntBASIC0.9□□□□□ -2.27
RHOXF2Q9BQY4 RNU6-596P-201ENST00000365395 98 ntBASIC0.9□□□□□ -2.27
RHOXF2Q9BQY4 MIR10B-201ENST00000385011 110 ntBASIC0.9□□□□□ -2.27
RHOXF2Q9BQY4 MIR146A-201ENST00000385201 99 ntBASIC0.9□□□□□ -2.27
RHOXF2Q9BQY4 AC005002.2-201ENST00000438228 269 ntBASIC0.9□□□□□ -2.27
RHOXF2Q9BQY4 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.9□□□□□ -2.27
RHOXF2Q9BQY4 AC074290.1-201ENST00000448883 135 ntBASIC0.9□□□□□ -2.27
RHOXF2Q9BQY4 MTND1P17-201ENST00000448961 204 ntBASIC0.9□□□□□ -2.27
RHOXF2Q9BQY4 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.9□□□□□ -2.27
RHOXF2Q9BQY4 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.9□□□□□ -2.27
RHOXF2Q9BQY4 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.9□□□□□ -2.27
RHOXF2Q9BQY4 HMGN1P12-201ENST00000499125 195 ntBASIC0.9□□□□□ -2.27
RHOXF2Q9BQY4 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.9□□□□□ -2.27
RHOXF2Q9BQY4 RNU6-1198P-201ENST00000516904 67 ntBASIC0.9□□□□□ -2.27
RHOXF2Q9BQY4 CBX3P8-201ENST00000532412 525 ntBASIC0.9□□□□□ -2.27
RHOXF2Q9BQY4 AL929325.1-201ENST00000603096 117 ntBASIC0.9□□□□□ -2.27
RHOXF2Q9BQY4 AL390123.1-201ENST00000603216 237 ntBASIC0.9□□□□□ -2.27
RHOXF2Q9BQY4 AC090517.2-201ENST00000614966 680 ntBASIC0.9□□□□□ -2.27
RHOXF2Q9BQY4 MIR6734-201ENST00000621166 68 ntBASIC0.9□□□□□ -2.27
RHOXF2Q9BQY4 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
RHOXF2Q9BQY4 RNU6-727P-201ENST00000363592 107 ntBASIC0.89□□□□□ -2.27
RHOXF2Q9BQY4 RNU4-40P-201ENST00000364351 143 ntBASIC0.89□□□□□ -2.27
RHOXF2Q9BQY4 Y_RNA.301-201ENST00000364990 103 ntBASIC0.89□□□□□ -2.27
RHOXF2Q9BQY4 RNU6-842P-201ENST00000384269 107 ntBASIC0.89□□□□□ -2.27
RHOXF2Q9BQY4 MIR1253-201ENST00000408273 105 ntBASIC0.89□□□□□ -2.27
RHOXF2Q9BQY4 RPL30P16-201ENST00000419341 429 ntBASIC0.89□□□□□ -2.27
RHOXF2Q9BQY4 AC008134.1-201ENST00000420943 193 ntBASIC0.89□□□□□ -2.27
RHOXF2Q9BQY4 USP9YP30-201ENST00000430729 455 ntBASIC0.89□□□□□ -2.27
RHOXF2Q9BQY4 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.89□□□□□ -2.27
RHOXF2Q9BQY4 AP000870.1-201ENST00000472927 406 ntBASIC0.89□□□□□ -2.27
RHOXF2Q9BQY4 AC011604.1-201ENST00000545978 196 ntBASIC0.89□□□□□ -2.27
RHOXF2Q9BQY4 MIR4653-201ENST00000585107 83 ntBASIC0.89□□□□□ -2.27
RHOXF2Q9BQY4 AC021506.2-201ENST00000612354 169 ntBASIC0.89□□□□□ -2.27
RHOXF2Q9BQY4 MIR3688-2-201ENST00000636963 87 ntBASIC0.89□□□□□ -2.27
RHOXF2Q9BQY4 AC100810.6-201ENST00000638068 285 ntBASIC0.89□□□□□ -2.27
RHOXF2Q9BQY4 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
RHOXF2Q9BQY4 RNU6-595P-201ENST00000363944 107 ntBASIC0.88□□□□□ -2.27
RHOXF2Q9BQY4 RNU4-12P-201ENST00000365233 139 ntBASIC0.88□□□□□ -2.27
RHOXF2Q9BQY4 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.88□□□□□ -2.27
RHOXF2Q9BQY4 AL606490.4-201ENST00000423117 127 ntBASIC0.88□□□□□ -2.27
RHOXF2Q9BQY4 AC010154.1-201ENST00000425857 269 ntBASIC0.88□□□□□ -2.27
RHOXF2Q9BQY4 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.88□□□□□ -2.27
RHOXF2Q9BQY4 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.88□□□□□ -2.27
RHOXF2Q9BQY4 AC093303.1-201ENST00000514549 295 ntBASIC0.88□□□□□ -2.27
RHOXF2Q9BQY4 RNU6-566P-201ENST00000516790 107 ntBASIC0.88□□□□□ -2.27
RHOXF2Q9BQY4 RNU6-273P-201ENST00000516937 96 ntBASIC0.88□□□□□ -2.27
RHOXF2Q9BQY4 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.88□□□□□ -2.27
RHOXF2Q9BQY4 SNORA4-201ENST00000584302 138 ntBASIC0.88□□□□□ -2.27
RHOXF2Q9BQY4 U4.5-201ENST00000617137 123 ntBASIC0.88□□□□□ -2.27
RHOXF2Q9BQY4 Y_RNA.157-201ENST00000363638 102 ntBASIC0.87□□□□□ -2.27
RHOXF2Q9BQY4 Y_RNA.295-201ENST00000364918 102 ntBASIC0.87□□□□□ -2.27
RHOXF2Q9BQY4 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.87□□□□□ -2.27
RHOXF2Q9BQY4 Y_RNA.405-201ENST00000383979 100 ntBASIC0.87□□□□□ -2.27
RHOXF2Q9BQY4 Y_RNA.451-201ENST00000384200 100 ntBASIC0.87□□□□□ -2.27
RHOXF2Q9BQY4 RNU6-793P-201ENST00000384233 104 ntBASIC0.87□□□□□ -2.27
RHOXF2Q9BQY4 Y_RNA.524-201ENST00000384564 100 ntBASIC0.87□□□□□ -2.27
RHOXF2Q9BQY4 Y_RNA.561-201ENST00000384694 100 ntBASIC0.87□□□□□ -2.27
RHOXF2Q9BQY4 RNU6-1031P-201ENST00000384773 107 ntBASIC0.87□□□□□ -2.27
RHOXF2Q9BQY4 RNA5SP118-201ENST00000410385 109 ntBASIC0.87□□□□□ -2.27
RHOXF2Q9BQY4 RNU2-64P-201ENST00000411315 191 ntBASIC0.87□□□□□ -2.27
RHOXF2Q9BQY4 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.87□□□□□ -2.27
RHOXF2Q9BQY4 RPS4XP11-201ENST00000446897 772 ntBASIC0.87□□□□□ -2.27
RHOXF2Q9BQY4 SNORD5.1-201ENST00000458800 75 ntBASIC0.87□□□□□ -2.27
RHOXF2Q9BQY4 RNU6-351P-201ENST00000516097 100 ntBASIC0.87□□□□□ -2.27
RHOXF2Q9BQY4 RNA5SP220-201ENST00000516298 104 ntBASIC0.87□□□□□ -2.27
RHOXF2Q9BQY4 SUMO2P16-201ENST00000519475 264 ntBASIC0.87□□□□□ -2.27
RHOXF2Q9BQY4 AC091144.1-201ENST00000519573 138 ntBASIC0.87□□□□□ -2.27
RHOXF2Q9BQY4 AC134698.4-201ENST00000523451 826 ntBASIC0.87□□□□□ -2.27
RHOXF2Q9BQY4 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.87□□□□□ -2.27
RHOXF2Q9BQY4 AL590705.4-201ENST00000532209 134 ntBASIC0.87□□□□□ -2.27
RHOXF2Q9BQY4 FAM71BP1-201ENST00000604431 523 ntBASIC0.87□□□□□ -2.27
RHOXF2Q9BQY4 AC012557.2-201ENST00000605919 418 ntBASIC0.87□□□□□ -2.27
RHOXF2Q9BQY4 AL359075.3-201ENST00000613288 217 ntBASIC0.87□□□□□ -2.27
RHOXF2Q9BQY4 U6.73-201ENST00000619194 103 ntBASIC0.87□□□□□ -2.27
RHOXF2Q9BQY4 MIR3662-201ENST00000637030 95 ntBASIC0.87□□□□□ -2.27
RHOXF2Q9BQY4 ZNF299P-201ENST00000406845 1804 ntBASIC0.87□□□□□ -2.27
RHOXF2Q9BQY4 RNY1P14-201ENST00000384426 108 ntBASIC0.86□□□□□ -2.27
RHOXF2Q9BQY4 RNU6-541P-201ENST00000384709 110 ntBASIC0.86□□□□□ -2.27
RHOXF2Q9BQY4 MIR19B1-201ENST00000384829 87 ntBASIC0.86□□□□□ -2.27
RHOXF2Q9BQY4 MIR520E-201ENST00000384867 87 ntBASIC0.86□□□□□ -2.27
RHOXF2Q9BQY4 RNA5SP323-201ENST00000391094 133 ntBASIC0.86□□□□□ -2.27
RHOXF2Q9BQY4 SNORD115-47-201ENST00000391226 86 ntBASIC0.86□□□□□ -2.27
RHOXF2Q9BQY4 RNU1-139P-201ENST00000391307 165 ntBASIC0.86□□□□□ -2.27
RHOXF2Q9BQY4 MIR548F1-201ENST00000408667 84 ntBASIC0.86□□□□□ -2.27
RHOXF2Q9BQY4 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.86□□□□□ -2.27
RHOXF2Q9BQY4 MTND3P23-201ENST00000431980 347 ntBASIC0.86□□□□□ -2.27
RHOXF2Q9BQY4 MTND4P18-201ENST00000447010 465 ntBASIC0.86□□□□□ -2.27
RHOXF2Q9BQY4 RPS29P1-201ENST00000465274 159 ntBASIC0.86□□□□□ -2.27
RHOXF2Q9BQY4 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.86□□□□□ -2.27
RHOXF2Q9BQY4 RNU1-142P-201ENST00000516682 145 ntBASIC0.86□□□□□ -2.27
RHOXF2Q9BQY4 FAM106DP-201ENST00000586416 501 ntBASIC0.86□□□□□ -2.27
RHOXF2Q9BQY4 AC022432.1-201ENST00000595739 310 ntBASIC0.86□□□□□ -2.27
RHOXF2Q9BQY4 AC106800.4-201ENST00000614905 153 ntBASIC0.86□□□□□ -2.27
RHOXF2Q9BQY4 MIR8054-201ENST00000620877 86 ntBASIC0.86□□□□□ -2.27
RHOXF2Q9BQY4 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms