Protein–RNA interactions for Protein: Q9BQ90

KLHDC3, Kelch domain-containing protein 3, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3Q9BQ90 AC125232.2-201ENST00000592457 143 ntBASIC1.17□□□□□ -2.22
KLHDC3Q9BQ90 AC009229.3-201ENST00000608056 282 ntBASIC1.17□□□□□ -2.22
KLHDC3Q9BQ90 AC092794.1-201ENST00000612734 582 ntBASIC1.17□□□□□ -2.22
KLHDC3Q9BQ90 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.17□□□□□ -2.22
KLHDC3Q9BQ90 RNU6-1123P-201ENST00000362347 106 ntBASIC1.16□□□□□ -2.22
KLHDC3Q9BQ90 Y_RNA.166-201ENST00000363730 102 ntBASIC1.16□□□□□ -2.22
KLHDC3Q9BQ90 RNU6-939P-201ENST00000384634 107 ntBASIC1.16□□□□□ -2.22
KLHDC3Q9BQ90 SNORA40.6-201ENST00000391153 128 ntBASIC1.16□□□□□ -2.22
KLHDC3Q9BQ90 MRPL35P1-201ENST00000404272 572 ntBASIC1.16□□□□□ -2.22
KLHDC3Q9BQ90 Y_RNA.595-201ENST00000410403 105 ntBASIC1.16□□□□□ -2.22
KLHDC3Q9BQ90 RNU6-1186P-201ENST00000410429 97 ntBASIC1.16□□□□□ -2.22
KLHDC3Q9BQ90 RNU6-1001P-201ENST00000411265 100 ntBASIC1.16□□□□□ -2.22
KLHDC3Q9BQ90 AC004965.1-201ENST00000413033 213 ntBASIC1.16□□□□□ -2.22
KLHDC3Q9BQ90 RPS27P16-201ENST00000425758 201 ntBASIC1.16□□□□□ -2.22
KLHDC3Q9BQ90 AL606517.2-201ENST00000442855 241 ntBASIC1.16□□□□□ -2.22
KLHDC3Q9BQ90 UBE2V1P7-201ENST00000446395 340 ntBASIC1.16□□□□□ -2.22
KLHDC3Q9BQ90 MTND3P10-201ENST00000450967 341 ntBASIC1.16□□□□□ -2.22
KLHDC3Q9BQ90 RPL31P58-201ENST00000469001 379 ntBASIC1.16□□□□□ -2.22
KLHDC3Q9BQ90 RNA5SP458-201ENST00000516188 119 ntBASIC1.16□□□□□ -2.22
KLHDC3Q9BQ90 RNU7-99P-201ENST00000516271 62 ntBASIC1.16□□□□□ -2.22
KLHDC3Q9BQ90 RNU6-107P-201ENST00000516643 102 ntBASIC1.16□□□□□ -2.22
KLHDC3Q9BQ90 RNU7-30P-201ENST00000516835 62 ntBASIC1.16□□□□□ -2.22
KLHDC3Q9BQ90 RNU7-128P-201ENST00000517247 62 ntBASIC1.16□□□□□ -2.22
KLHDC3Q9BQ90 AC004584.2-201ENST00000570407 410 ntBASIC1.16□□□□□ -2.22
KLHDC3Q9BQ90 PISRT1.1-201ENST00000616930 107 ntBASIC1.16□□□□□ -2.22
KLHDC3Q9BQ90 AL121890.5-201ENST00000620848 304 ntBASIC1.16□□□□□ -2.22
KLHDC3Q9BQ90 AC099654.5-201ENST00000636479 350 ntBASIC1.16□□□□□ -2.22
KLHDC3Q9BQ90 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.16□□□□□ -2.22
KLHDC3Q9BQ90 Y_RNA.279-201ENST00000364763 95 ntBASIC1.15□□□□□ -2.23
KLHDC3Q9BQ90 RNU6-1264P-201ENST00000383891 107 ntBASIC1.15□□□□□ -2.23
KLHDC3Q9BQ90 MIR329-1-201ENST00000385028 80 ntBASIC1.15□□□□□ -2.23
KLHDC3Q9BQ90 Y_RNA.619-201ENST00000410951 90 ntBASIC1.15□□□□□ -2.23
KLHDC3Q9BQ90 AL353997.1-201ENST00000432936 108 ntBASIC1.15□□□□□ -2.23
KLHDC3Q9BQ90 UQCRBP2-201ENST00000447827 297 ntBASIC1.15□□□□□ -2.23
KLHDC3Q9BQ90 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.15□□□□□ -2.23
KLHDC3Q9BQ90 SNORD65B-201ENST00000459126 73 ntBASIC1.15□□□□□ -2.23
KLHDC3Q9BQ90 RNU7-94P-201ENST00000459576 63 ntBASIC1.15□□□□□ -2.23
KLHDC3Q9BQ90 RPL7P42-201ENST00000481005 679 ntBASIC1.15□□□□□ -2.23
KLHDC3Q9BQ90 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.15□□□□□ -2.23
KLHDC3Q9BQ90 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.15□□□□□ -2.23
KLHDC3Q9BQ90 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.15□□□□□ -2.23
KLHDC3Q9BQ90 AL442163.3-201ENST00000554110 156 ntBASIC1.15□□□□□ -2.23
KLHDC3Q9BQ90 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.15□□□□□ -2.23
KLHDC3Q9BQ90 MIR3684-201ENST00000579779 74 ntBASIC1.15□□□□□ -2.23
KLHDC3Q9BQ90 MIR3937-201ENST00000580135 106 ntBASIC1.15□□□□□ -2.23
KLHDC3Q9BQ90 AL929325.1-201ENST00000603096 117 ntBASIC1.15□□□□□ -2.23
KLHDC3Q9BQ90 AC022217.4-201ENST00000604389 163 ntBASIC1.15□□□□□ -2.23
KLHDC3Q9BQ90 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.15□□□□□ -2.23
KLHDC3Q9BQ90 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.15□□□□□ -2.23
KLHDC3Q9BQ90 CASC19-280ENST00000642102 1351 ntBASIC1.15□□□□□ -2.23
KLHDC3Q9BQ90 RNU6-845P-201ENST00000362578 103 ntBASIC1.14□□□□□ -2.23
KLHDC3Q9BQ90 RNU6-1065P-201ENST00000384513 106 ntBASIC1.14□□□□□ -2.23
KLHDC3Q9BQ90 MIR513A1-201ENST00000385138 129 ntBASIC1.14□□□□□ -2.23
KLHDC3Q9BQ90 RN7SKP200-201ENST00000410564 320 ntBASIC1.14□□□□□ -2.23
KLHDC3Q9BQ90 AC245047.3-201ENST00000429428 127 ntBASIC1.14□□□□□ -2.23
KLHDC3Q9BQ90 AC005002.2-201ENST00000438228 269 ntBASIC1.14□□□□□ -2.23
KLHDC3Q9BQ90 MRPS10P1-201ENST00000448483 130 ntBASIC1.14□□□□□ -2.23
KLHDC3Q9BQ90 AC009474.2-201ENST00000451383 136 ntBASIC1.14□□□□□ -2.23
KLHDC3Q9BQ90 RNU7-87P-201ENST00000459343 62 ntBASIC1.14□□□□□ -2.23
KLHDC3Q9BQ90 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.14□□□□□ -2.23
KLHDC3Q9BQ90 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.14□□□□□ -2.23
KLHDC3Q9BQ90 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.14□□□□□ -2.23
KLHDC3Q9BQ90 AC010598.1-201ENST00000510378 103 ntBASIC1.14□□□□□ -2.23
KLHDC3Q9BQ90 AC074133.1-201ENST00000515696 183 ntBASIC1.14□□□□□ -2.23
KLHDC3Q9BQ90 AC019176.1-201ENST00000518519 225 ntBASIC1.14□□□□□ -2.23
KLHDC3Q9BQ90 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.14□□□□□ -2.23
KLHDC3Q9BQ90 MIR4438-201ENST00000585271 93 ntBASIC1.14□□□□□ -2.23
KLHDC3Q9BQ90 RNU6-874P-201ENST00000362390 105 ntBASIC1.13□□□□□ -2.23
KLHDC3Q9BQ90 Y_RNA.160-201ENST00000363677 92 ntBASIC1.13□□□□□ -2.23
KLHDC3Q9BQ90 Y_RNA.248-201ENST00000364501 109 ntBASIC1.13□□□□□ -2.23
KLHDC3Q9BQ90 RNU6-1145P-201ENST00000384246 107 ntBASIC1.13□□□□□ -2.23
KLHDC3Q9BQ90 RNU6-1031P-201ENST00000384773 107 ntBASIC1.13□□□□□ -2.23
KLHDC3Q9BQ90 RNU11-5P-201ENST00000391216 129 ntBASIC1.13□□□□□ -2.23
KLHDC3Q9BQ90 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.13□□□□□ -2.23
KLHDC3Q9BQ90 MRPL42P3-201ENST00000401492 326 ntBASIC1.13□□□□□ -2.23
KLHDC3Q9BQ90 Y_RNA.638-201ENST00000459374 113 ntBASIC1.13□□□□□ -2.23
KLHDC3Q9BQ90 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.13□□□□□ -2.23
KLHDC3Q9BQ90 SNORA31.10-201ENST00000516482 106 ntBASIC1.13□□□□□ -2.23
KLHDC3Q9BQ90 Y_RNA.691-201ENST00000516611 103 ntBASIC1.13□□□□□ -2.23
KLHDC3Q9BQ90 AC021506.2-201ENST00000612354 169 ntBASIC1.13□□□□□ -2.23
KLHDC3Q9BQ90 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.13□□□□□ -2.23
KLHDC3Q9BQ90 AC040896.1-201ENST00000613819 479 ntBASIC1.13□□□□□ -2.23
KLHDC3Q9BQ90 AC104260.1-201ENST00000616660 539 ntBASIC1.13□□□□□ -2.23
KLHDC3Q9BQ90 MIR8054-201ENST00000620877 86 ntBASIC1.13□□□□□ -2.23
KLHDC3Q9BQ90 RNU6-53P-201ENST00000365367 106 ntBASIC1.12□□□□□ -2.23
KLHDC3Q9BQ90 Y_RNA.404-201ENST00000383978 102 ntBASIC1.12□□□□□ -2.23
KLHDC3Q9BQ90 Y_RNA.557-201ENST00000384680 107 ntBASIC1.12□□□□□ -2.23
KLHDC3Q9BQ90 SNORA75.4-201ENST00000391278 119 ntBASIC1.12□□□□□ -2.23
KLHDC3Q9BQ90 FGF7P8-201ENST00000402994 292 ntBASIC1.12□□□□□ -2.23
KLHDC3Q9BQ90 ELOCP21-201ENST00000412558 336 ntBASIC1.12□□□□□ -2.23
KLHDC3Q9BQ90 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.12□□□□□ -2.23
KLHDC3Q9BQ90 AC010154.1-201ENST00000425857 269 ntBASIC1.12□□□□□ -2.23
KLHDC3Q9BQ90 AC092423.1-201ENST00000430165 186 ntBASIC1.12□□□□□ -2.23
KLHDC3Q9BQ90 MTND1P2-201ENST00000430604 821 ntBASIC1.12□□□□□ -2.23
KLHDC3Q9BQ90 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.12□□□□□ -2.23
KLHDC3Q9BQ90 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.12□□□□□ -2.23
KLHDC3Q9BQ90 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.12□□□□□ -2.23
KLHDC3Q9BQ90 RPS27P22-201ENST00000478056 241 ntBASIC1.12□□□□□ -2.23
KLHDC3Q9BQ90 RPL17P19-201ENST00000489069 552 ntBASIC1.12□□□□□ -2.23
KLHDC3Q9BQ90 AC010469.2-201ENST00000496412 480 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 140.8 ms