Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AL135790.2-201ENST00000437701 267 ntBASIC1.43□□□□□ -2.18
SSX3Q99909 AC005002.2-201ENST00000438228 269 ntBASIC1.43□□□□□ -2.18
SSX3Q99909 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC1.43□□□□□ -2.18
SSX3Q99909 RNU7-34P-201ENST00000459394 64 ntBASIC1.43□□□□□ -2.18
SSX3Q99909 RPS29P11-201ENST00000496507 171 ntBASIC1.43□□□□□ -2.18
SSX3Q99909 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.43□□□□□ -2.18
SSX3Q99909 MIR2355-201ENST00000517199 87 ntBASIC1.43□□□□□ -2.18
SSX3Q99909 SUB1P3-201ENST00000564581 315 ntBASIC1.43□□□□□ -2.18
SSX3Q99909 MIR4419B-201ENST00000577260 68 ntBASIC1.43□□□□□ -2.18
SSX3Q99909 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
SSX3Q99909 MIR8081-201ENST00000611533 95 ntBASIC1.43□□□□□ -2.18
SSX3Q99909 AC025253.1-201ENST00000613623 543 ntBASIC1.43□□□□□ -2.18
SSX3Q99909 AC133104.2-201ENST00000615272 193 ntBASIC1.43□□□□□ -2.18
SSX3Q99909 U6.108-201ENST00000637764 58 ntBASIC1.43□□□□□ -2.18
SSX3Q99909 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
SSX3Q99909 AC073544.1-201ENST00000600110 1595 ntBASIC1.42□□□□□ -2.18
SSX3Q99909 AL161722.3-201ENST00000605789 2983 ntBASIC1.42□□□□□ -2.18
SSX3Q99909 MIR302D-201ENST00000362275 68 ntBASIC1.42□□□□□ -2.18
SSX3Q99909 RNU1-17P-201ENST00000363022 152 ntBASIC1.42□□□□□ -2.18
SSX3Q99909 RNU6-318P-201ENST00000384283 103 ntBASIC1.42□□□□□ -2.18
SSX3Q99909 RNU6-1297P-201ENST00000384415 104 ntBASIC1.42□□□□□ -2.18
SSX3Q99909 RNU6-950P-201ENST00000384651 107 ntBASIC1.42□□□□□ -2.18
SSX3Q99909 SNORA69.1-201ENST00000390904 137 ntBASIC1.42□□□□□ -2.18
SSX3Q99909 RPL21P1-201ENST00000399532 476 ntBASIC1.42□□□□□ -2.18
SSX3Q99909 RNU6-1156P-201ENST00000410365 100 ntBASIC1.42□□□□□ -2.18
SSX3Q99909 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.42□□□□□ -2.18
SSX3Q99909 RPS26P45-201ENST00000471748 340 ntBASIC1.42□□□□□ -2.18
SSX3Q99909 RPS27P22-201ENST00000478056 241 ntBASIC1.42□□□□□ -2.18
SSX3Q99909 AC010598.1-201ENST00000510378 103 ntBASIC1.42□□□□□ -2.18
SSX3Q99909 RNU6-902P-201ENST00000517212 91 ntBASIC1.42□□□□□ -2.18
SSX3Q99909 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.42□□□□□ -2.18
SSX3Q99909 AC018448.1-201ENST00000552843 316 ntBASIC1.42□□□□□ -2.18
SSX3Q99909 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.42□□□□□ -2.18
SSX3Q99909 MIR4438-201ENST00000585271 93 ntBASIC1.42□□□□□ -2.18
SSX3Q99909 AC080078.3-201ENST00000605407 463 ntBASIC1.42□□□□□ -2.18
SSX3Q99909 MIR502-201ENST00000606349 86 ntBASIC1.42□□□□□ -2.18
SSX3Q99909 AC006435.5-201ENST00000624486 112 ntBASIC1.42□□□□□ -2.18
SSX3Q99909 Y_RNA.384-201ENST00000383909 102 ntBASIC1.41□□□□□ -2.18
SSX3Q99909 Y_RNA.387-201ENST00000383918 102 ntBASIC1.41□□□□□ -2.18
SSX3Q99909 RNU6-203P-201ENST00000384038 104 ntBASIC1.41□□□□□ -2.18
SSX3Q99909 AL627390.1-201ENST00000396055 340 ntBASIC1.41□□□□□ -2.18
SSX3Q99909 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.41□□□□□ -2.18
SSX3Q99909 AC245517.4-201ENST00000448601 281 ntBASIC1.41□□□□□ -2.18
SSX3Q99909 MTCO3P10-201ENST00000455912 772 ntBASIC1.41□□□□□ -2.18
SSX3Q99909 RNU6-625P-201ENST00000459412 107 ntBASIC1.41□□□□□ -2.18
SSX3Q99909 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.41□□□□□ -2.18
SSX3Q99909 AC010469.2-201ENST00000496412 480 ntBASIC1.41□□□□□ -2.18
SSX3Q99909 AC079140.2-201ENST00000506193 142 ntBASIC1.41□□□□□ -2.18
SSX3Q99909 RNU7-99P-201ENST00000516271 62 ntBASIC1.41□□□□□ -2.18
SSX3Q99909 RNU6-250P-201ENST00000516958 103 ntBASIC1.41□□□□□ -2.18
SSX3Q99909 AC023157.2-201ENST00000540596 141 ntBASIC1.41□□□□□ -2.18
SSX3Q99909 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.41□□□□□ -2.18
SSX3Q99909 MIR3937-201ENST00000580135 106 ntBASIC1.41□□□□□ -2.18
SSX3Q99909 AL121890.5-201ENST00000620848 304 ntBASIC1.41□□□□□ -2.18
SSX3Q99909 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.41□□□□□ -2.18
SSX3Q99909 MIR26B-201ENST00000362251 77 ntBASIC1.4□□□□□ -2.19
SSX3Q99909 RNU6-1301P-201ENST00000362724 104 ntBASIC1.4□□□□□ -2.19
SSX3Q99909 Y_RNA.259-201ENST00000364619 101 ntBASIC1.4□□□□□ -2.19
SSX3Q99909 RNA5SP190-201ENST00000365222 118 ntBASIC1.4□□□□□ -2.19
SSX3Q99909 MTCYBP4-201ENST00000401524 249 ntBASIC1.4□□□□□ -2.19
SSX3Q99909 MRPL35P1-201ENST00000404272 572 ntBASIC1.4□□□□□ -2.19
SSX3Q99909 SNORD12B-201ENST00000410433 91 ntBASIC1.4□□□□□ -2.19
SSX3Q99909 RNA5SP475-201ENST00000410568 110 ntBASIC1.4□□□□□ -2.19
SSX3Q99909 RPL30P13-201ENST00000418873 348 ntBASIC1.4□□□□□ -2.19
SSX3Q99909 RPS27P16-201ENST00000425758 201 ntBASIC1.4□□□□□ -2.19
SSX3Q99909 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.4□□□□□ -2.19
SSX3Q99909 AL606517.2-201ENST00000442855 241 ntBASIC1.4□□□□□ -2.19
SSX3Q99909 MRPS10P1-201ENST00000448483 130 ntBASIC1.4□□□□□ -2.19
SSX3Q99909 AC099513.1-201ENST00000490423 301 ntBASIC1.4□□□□□ -2.19
SSX3Q99909 SNORA40.9-201ENST00000515895 93 ntBASIC1.4□□□□□ -2.19
SSX3Q99909 RNU6-470P-201ENST00000515954 104 ntBASIC1.4□□□□□ -2.19
SSX3Q99909 RNU7-4P-201ENST00000516961 62 ntBASIC1.4□□□□□ -2.19
SSX3Q99909 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.4□□□□□ -2.19
SSX3Q99909 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.4□□□□□ -2.19
SSX3Q99909 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.4□□□□□ -2.19
SSX3Q99909 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.4□□□□□ -2.19
SSX3Q99909 MIR3684-201ENST00000579779 74 ntBASIC1.4□□□□□ -2.19
SSX3Q99909 PRR13P7-201ENST00000605538 430 ntBASIC1.4□□□□□ -2.19
SSX3Q99909 AC087588.2-201ENST00000617667 426 ntBASIC1.4□□□□□ -2.19
SSX3Q99909 MTND4LP32-201ENST00000636111 270 ntBASIC1.4□□□□□ -2.19
SSX3Q99909 MIR1302-1-201ENST00000637932 143 ntBASIC1.4□□□□□ -2.19
SSX3Q99909 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.39□□□□□ -2.19
SSX3Q99909 AC010154.1-201ENST00000425857 269 ntBASIC1.39□□□□□ -2.19
SSX3Q99909 MTND4P28-201ENST00000426217 387 ntBASIC1.39□□□□□ -2.19
SSX3Q99909 SDAD1P3-201ENST00000427380 333 ntBASIC1.39□□□□□ -2.19
SSX3Q99909 RPS27P1-201ENST00000450552 247 ntBASIC1.39□□□□□ -2.19
SSX3Q99909 RNU7-94P-201ENST00000459576 63 ntBASIC1.39□□□□□ -2.19
SSX3Q99909 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.39□□□□□ -2.19
SSX3Q99909 AC105758.1-201ENST00000506038 399 ntBASIC1.39□□□□□ -2.19
SSX3Q99909 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.39□□□□□ -2.19
SSX3Q99909 RNU6-277P-201ENST00000516272 106 ntBASIC1.39□□□□□ -2.19
SSX3Q99909 RNU7-128P-201ENST00000517247 62 ntBASIC1.39□□□□□ -2.19
SSX3Q99909 AC144568.1-201ENST00000520139 137 ntBASIC1.39□□□□□ -2.19
SSX3Q99909 MIR3683-201ENST00000580847 82 ntBASIC1.39□□□□□ -2.19
SSX3Q99909 MIR4801-201ENST00000582704 82 ntBASIC1.39□□□□□ -2.19
SSX3Q99909 AL929325.1-201ENST00000603096 117 ntBASIC1.39□□□□□ -2.19
SSX3Q99909 AC022217.4-201ENST00000604389 163 ntBASIC1.39□□□□□ -2.19
SSX3Q99909 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.39□□□□□ -2.19
SSX3Q99909 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
SSX3Q99909 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 146.7 ms