Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AL357139.1-201ENST00000407792 426 ntBASIC2.55□□□□□ -2
SMOQ99835 RNU6-57P-201ENST00000411348 103 ntBASIC2.55□□□□□ -2
SMOQ99835 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.55□□□□□ -2
SMOQ99835 AL135790.2-201ENST00000437701 267 ntBASIC2.55□□□□□ -2
SMOQ99835 AC104389.3-201ENST00000445629 235 ntBASIC2.55□□□□□ -2
SMOQ99835 Y_RNA.641-201ENST00000459414 105 ntBASIC2.55□□□□□ -2
SMOQ99835 SNORD116-28-201ENST00000516123 91 ntBASIC2.55□□□□□ -2
SMOQ99835 RN7SKP40-201ENST00000517211 242 ntBASIC2.55□□□□□ -2
SMOQ99835 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.55□□□□□ -2
SMOQ99835 AC103810.6-201ENST00000606708 136 ntBASIC2.55□□□□□ -2
SMOQ99835 AC016717.2-201ENST00000609089 5141 ntBASIC2.55□□□□□ -2
SMOQ99835 AC046143.2-201ENST00000609789 160 ntBASIC2.55□□□□□ -2
SMOQ99835 MIR561-201ENST00000385216 97 ntBASIC2.54□□□□□ -2
SMOQ99835 MIR1298-201ENST00000408783 112 ntBASIC2.54□□□□□ -2
SMOQ99835 AC092427.1-202ENST00000430569 476 ntBASIC2.54□□□□□ -2
SMOQ99835 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.54□□□□□ -2
SMOQ99835 RNU6-221P-201ENST00000459541 99 ntBASIC2.54□□□□□ -2
SMOQ99835 AC010531.2-201ENST00000465012 153 ntBASIC2.54□□□□□ -2
SMOQ99835 RN7SL636P-201ENST00000497504 294 ntBASIC2.54□□□□□ -2
SMOQ99835 AC234781.5-201ENST00000508429 271 ntBASIC2.54□□□□□ -2
SMOQ99835 AC093259.1-201ENST00000509755 300 ntBASIC2.54□□□□□ -2
SMOQ99835 AC026436.1-201ENST00000510537 270 ntBASIC2.54□□□□□ -2
SMOQ99835 RNU6-667P-201ENST00000517186 102 ntBASIC2.54□□□□□ -2
SMOQ99835 MIR4282-201ENST00000583613 67 ntBASIC2.54□□□□□ -2
SMOQ99835 AC011921.3-201ENST00000605540 361 ntBASIC2.54□□□□□ -2
SMOQ99835 AC025754.2-201ENST00000606491 432 ntBASIC2.54□□□□□ -2
SMOQ99835 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.54□□□□□ -2
SMOQ99835 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SMOQ99835 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SMOQ99835 Y_RNA.82-201ENST00000363000 102 ntBASIC2.53□□□□□ -2
SMOQ99835 Y_RNA.92-201ENST00000363043 102 ntBASIC2.53□□□□□ -2
SMOQ99835 Y_RNA.200-201ENST00000364018 102 ntBASIC2.53□□□□□ -2
SMOQ99835 Y_RNA.235-201ENST00000364412 102 ntBASIC2.53□□□□□ -2
SMOQ99835 Y_RNA.306-201ENST00000365015 102 ntBASIC2.53□□□□□ -2
SMOQ99835 Y_RNA.312-201ENST00000365089 102 ntBASIC2.53□□□□□ -2
SMOQ99835 Y_RNA.322-201ENST00000365151 102 ntBASIC2.53□□□□□ -2
SMOQ99835 AL355796.1-201ENST00000406706 323 ntBASIC2.53□□□□□ -2
SMOQ99835 Y_RNA.590-201ENST00000410140 107 ntBASIC2.53□□□□□ -2
SMOQ99835 RNU2-61P-201ENST00000411069 191 ntBASIC2.53□□□□□ -2
SMOQ99835 AC074290.1-201ENST00000448883 135 ntBASIC2.53□□□□□ -2
SMOQ99835 Y_RNA.650-201ENST00000459002 102 ntBASIC2.53□□□□□ -2
SMOQ99835 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.53□□□□□ -2
SMOQ99835 Y_RNA.777-201ENST00000516982 102 ntBASIC2.53□□□□□ -2
SMOQ99835 AC021269.2-201ENST00000532318 330 ntBASIC2.53□□□□□ -2
SMOQ99835 MIR4435-1-201ENST00000582552 80 ntBASIC2.53□□□□□ -2
SMOQ99835 Y_RNA.771-201ENST00000598668 102 ntBASIC2.53□□□□□ -2
SMOQ99835 Y_RNA.789-201ENST00000622480 102 ntBASIC2.53□□□□□ -2
SMOQ99835 MIR1291-201ENST00000627649 87 ntBASIC2.53□□□□□ -2
SMOQ99835 FO624990.1-201ENST00000636373 85 ntBASIC2.53□□□□□ -2
SMOQ99835 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
SMOQ99835 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
SMOQ99835 MIR340-201ENST00000362125 95 ntBASIC2.52□□□□□ -2.01
SMOQ99835 Y_RNA.124-201ENST00000363339 93 ntBASIC2.52□□□□□ -2.01
SMOQ99835 Y_RNA.292-201ENST00000364904 97 ntBASIC2.52□□□□□ -2.01
SMOQ99835 Y_RNA.332-201ENST00000365271 113 ntBASIC2.52□□□□□ -2.01
SMOQ99835 RNU6-1235P-201ENST00000384559 107 ntBASIC2.52□□□□□ -2.01
SMOQ99835 RNU2-64P-201ENST00000411315 191 ntBASIC2.52□□□□□ -2.01
SMOQ99835 MTND5P15-201ENST00000434246 349 ntBASIC2.52□□□□□ -2.01
SMOQ99835 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.52□□□□□ -2.01
SMOQ99835 AL137159.1-201ENST00000452808 512 ntBASIC2.52□□□□□ -2.01
SMOQ99835 SNORD2.1-201ENST00000458762 69 ntBASIC2.52□□□□□ -2.01
SMOQ99835 Y_RNA.638-201ENST00000459374 113 ntBASIC2.52□□□□□ -2.01
SMOQ99835 RNU6-498P-201ENST00000459468 107 ntBASIC2.52□□□□□ -2.01
SMOQ99835 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.52□□□□□ -2.01
SMOQ99835 RNU6-948P-201ENST00000516374 107 ntBASIC2.52□□□□□ -2.01
SMOQ99835 Y_RNA.679-201ENST00000516416 91 ntBASIC2.52□□□□□ -2.01
SMOQ99835 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.52□□□□□ -2.01
SMOQ99835 MIR4446-201ENST00000578505 67 ntBASIC2.52□□□□□ -2.01
SMOQ99835 snoU18.1-201ENST00000629629 71 ntBASIC2.52□□□□□ -2.01
SMOQ99835 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SMOQ99835 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
SMOQ99835 RNY4P28-201ENST00000365281 93 ntBASIC2.51□□□□□ -2.01
SMOQ99835 SNORA25B-201ENST00000365507 128 ntBASIC2.51□□□□□ -2.01
SMOQ99835 SNORA20B-201ENST00000384220 132 ntBASIC2.51□□□□□ -2.01
SMOQ99835 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.51□□□□□ -2.01
SMOQ99835 AC016909.1-201ENST00000415916 166 ntBASIC2.51□□□□□ -2.01
SMOQ99835 SUMO1P4-201ENST00000429430 302 ntBASIC2.51□□□□□ -2.01
SMOQ99835 MTCO1P44-201ENST00000441935 243 ntBASIC2.51□□□□□ -2.01
SMOQ99835 SNORD65B-201ENST00000459126 73 ntBASIC2.51□□□□□ -2.01
SMOQ99835 RPS27AP9-201ENST00000477681 438 ntBASIC2.51□□□□□ -2.01
SMOQ99835 AC025647.1-201ENST00000517879 253 ntBASIC2.51□□□□□ -2.01
SMOQ99835 AC067747.1-201ENST00000608026 250 ntBASIC2.51□□□□□ -2.01
SMOQ99835 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
SMOQ99835 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
SMOQ99835 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.5□□□□□ -2.01
SMOQ99835 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
SMOQ99835 MIR21-201ENST00000362134 72 ntBASIC2.5□□□□□ -2.01
SMOQ99835 Y_RNA.199-201ENST00000364014 102 ntBASIC2.5□□□□□ -2.01
SMOQ99835 Y_RNA.297-201ENST00000364950 91 ntBASIC2.5□□□□□ -2.01
SMOQ99835 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
SMOQ99835 Y_RNA.626-201ENST00000411288 95 ntBASIC2.5□□□□□ -2.01
SMOQ99835 AC123900.1-201ENST00000420390 96 ntBASIC2.5□□□□□ -2.01
SMOQ99835 AL121890.1-201ENST00000435457 205 ntBASIC2.5□□□□□ -2.01
SMOQ99835 RPS12P2-201ENST00000439728 269 ntBASIC2.5□□□□□ -2.01
SMOQ99835 AC008413.1-201ENST00000511864 177 ntBASIC2.5□□□□□ -2.01
SMOQ99835 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.5□□□□□ -2.01
SMOQ99835 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.5□□□□□ -2.01
SMOQ99835 AL008718.3-201ENST00000610217 321 ntBASIC2.5□□□□□ -2.01
SMOQ99835 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.5□□□□□ -2.01
SMOQ99835 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 169 ms