Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 AC073910.1-201ENST00000445047 438 ntBASIC1.62□□□□□ -2.15
CPNE1Q99829 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.62□□□□□ -2.15
CPNE1Q99829 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.62□□□□□ -2.15
CPNE1Q99829 RPS26P45-201ENST00000471748 340 ntBASIC1.62□□□□□ -2.15
CPNE1Q99829 UBL5P3-201ENST00000475112 231 ntBASIC1.62□□□□□ -2.15
CPNE1Q99829 SNORD116.3-201ENST00000517176 78 ntBASIC1.62□□□□□ -2.15
CPNE1Q99829 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.62□□□□□ -2.15
CPNE1Q99829 MIR4795-201ENST00000584182 89 ntBASIC1.62□□□□□ -2.15
CPNE1Q99829 U6.108-201ENST00000637764 58 ntBASIC1.62□□□□□ -2.15
CPNE1Q99829 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.62□□□□□ -2.15
CPNE1Q99829 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.61□□□□□ -2.15
CPNE1Q99829 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CPNE1Q99829 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CPNE1Q99829 RNY3P11-201ENST00000364153 102 ntBASIC1.61□□□□□ -2.15
CPNE1Q99829 MIR1267-201ENST00000408723 78 ntBASIC1.61□□□□□ -2.15
CPNE1Q99829 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.61□□□□□ -2.15
CPNE1Q99829 AF228730.4-201ENST00000421457 183 ntBASIC1.61□□□□□ -2.15
CPNE1Q99829 HSPE1P21-201ENST00000438283 308 ntBASIC1.61□□□□□ -2.15
CPNE1Q99829 FCF1P4-201ENST00000448326 183 ntBASIC1.61□□□□□ -2.15
CPNE1Q99829 MRPS10P1-201ENST00000448483 130 ntBASIC1.61□□□□□ -2.15
CPNE1Q99829 snoU13.27-201ENST00000459278 104 ntBASIC1.61□□□□□ -2.15
CPNE1Q99829 RPS27P22-201ENST00000478056 241 ntBASIC1.61□□□□□ -2.15
CPNE1Q99829 TRBV12-1-201ENST00000479785 344 ntBASIC1.61□□□□□ -2.15
CPNE1Q99829 RPL26P26-201ENST00000480251 434 ntBASIC1.61□□□□□ -2.15
CPNE1Q99829 RNU7-99P-201ENST00000516271 62 ntBASIC1.61□□□□□ -2.15
CPNE1Q99829 Y_RNA.675-201ENST00000516389 149 ntBASIC1.61□□□□□ -2.15
CPNE1Q99829 CBX3P4-201ENST00000538909 354 ntBASIC1.61□□□□□ -2.15
CPNE1Q99829 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.61□□□□□ -2.15
CPNE1Q99829 MIR4438-201ENST00000585271 93 ntBASIC1.61□□□□□ -2.15
CPNE1Q99829 MIR502-201ENST00000606349 86 ntBASIC1.61□□□□□ -2.15
CPNE1Q99829 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
CPNE1Q99829 MIR424-201ENST00000362227 98 ntBASIC1.6□□□□□ -2.15
CPNE1Q99829 RNU6-1115P-201ENST00000362490 106 ntBASIC1.6□□□□□ -2.15
CPNE1Q99829 SNORA20B-201ENST00000384220 132 ntBASIC1.6□□□□□ -2.15
CPNE1Q99829 U8.13-201ENST00000390842 128 ntBASIC1.6□□□□□ -2.15
CPNE1Q99829 SNORD78.2-201ENST00000391076 69 ntBASIC1.6□□□□□ -2.15
CPNE1Q99829 AC022028.1-201ENST00000412054 408 ntBASIC1.6□□□□□ -2.15
CPNE1Q99829 COX6CP10-201ENST00000416832 224 ntBASIC1.6□□□□□ -2.15
CPNE1Q99829 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.6□□□□□ -2.15
CPNE1Q99829 JTBP1-201ENST00000441314 247 ntBASIC1.6□□□□□ -2.15
CPNE1Q99829 AC010469.2-201ENST00000496412 480 ntBASIC1.6□□□□□ -2.15
CPNE1Q99829 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.6□□□□□ -2.15
CPNE1Q99829 RNU7-128P-201ENST00000517247 62 ntBASIC1.6□□□□□ -2.15
CPNE1Q99829 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.6□□□□□ -2.15
CPNE1Q99829 AC027419.1-201ENST00000522976 328 ntBASIC1.6□□□□□ -2.15
CPNE1Q99829 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.6□□□□□ -2.15
CPNE1Q99829 AC138305.3-201ENST00000624988 240 ntBASIC1.6□□□□□ -2.15
CPNE1Q99829 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
CPNE1Q99829 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.59□□□□□ -2.15
CPNE1Q99829 RNU4-79P-201ENST00000362764 141 ntBASIC1.59□□□□□ -2.15
CPNE1Q99829 RNU6-271P-201ENST00000363858 105 ntBASIC1.59□□□□□ -2.15
CPNE1Q99829 RNU6-950P-201ENST00000384651 107 ntBASIC1.59□□□□□ -2.15
CPNE1Q99829 MIR934-201ENST00000401241 83 ntBASIC1.59□□□□□ -2.15
CPNE1Q99829 AL355796.1-201ENST00000406706 323 ntBASIC1.59□□□□□ -2.15
CPNE1Q99829 SUMO1P2-201ENST00000452524 304 ntBASIC1.59□□□□□ -2.15
CPNE1Q99829 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.59□□□□□ -2.15
CPNE1Q99829 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.59□□□□□ -2.15
CPNE1Q99829 RNU6-408P-201ENST00000515910 100 ntBASIC1.59□□□□□ -2.15
CPNE1Q99829 RNU6-976P-201ENST00000516086 111 ntBASIC1.59□□□□□ -2.15
CPNE1Q99829 AP002001.1-203ENST00000534002 267 ntBASIC1.59□□□□□ -2.15
CPNE1Q99829 AC023157.2-201ENST00000540596 141 ntBASIC1.59□□□□□ -2.15
CPNE1Q99829 RAB11AP2-201ENST00000545905 639 ntBASIC1.59□□□□□ -2.15
CPNE1Q99829 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.59□□□□□ -2.15
CPNE1Q99829 HSBP1P1-201ENST00000555205 166 ntBASIC1.59□□□□□ -2.15
CPNE1Q99829 VN1R91P-201ENST00000594377 169 ntBASIC1.59□□□□□ -2.15
CPNE1Q99829 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
CPNE1Q99829 Y_RNA.315-201ENST00000365117 102 ntBASIC1.58□□□□□ -2.16
CPNE1Q99829 RNU6-926P-201ENST00000384075 107 ntBASIC1.58□□□□□ -2.16
CPNE1Q99829 RNA5SP109-201ENST00000391010 116 ntBASIC1.58□□□□□ -2.16
CPNE1Q99829 RNU11-5P-201ENST00000391216 129 ntBASIC1.58□□□□□ -2.16
CPNE1Q99829 RPS20P15-201ENST00000412792 311 ntBASIC1.58□□□□□ -2.16
CPNE1Q99829 MTCO3P19-201ENST00000415864 321 ntBASIC1.58□□□□□ -2.16
CPNE1Q99829 AC005002.2-201ENST00000438228 269 ntBASIC1.58□□□□□ -2.16
CPNE1Q99829 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.58□□□□□ -2.16
CPNE1Q99829 snoU13.9-201ENST00000458927 103 ntBASIC1.58□□□□□ -2.16
CPNE1Q99829 RNU7-94P-201ENST00000459576 63 ntBASIC1.58□□□□□ -2.16
CPNE1Q99829 RNU1-41P-201ENST00000516161 162 ntBASIC1.58□□□□□ -2.16
CPNE1Q99829 RNU1-48P-201ENST00000516400 162 ntBASIC1.58□□□□□ -2.16
CPNE1Q99829 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.58□□□□□ -2.16
CPNE1Q99829 DEFB122-202ENST00000569013 197 ntBASIC1.58□□□□□ -2.16
CPNE1Q99829 AC006600.1-201ENST00000572529 153 ntBASIC1.58□□□□□ -2.16
CPNE1Q99829 MIR4709-201ENST00000577272 72 ntBASIC1.58□□□□□ -2.16
CPNE1Q99829 AL117336.2-201ENST00000602435 335 ntBASIC1.58□□□□□ -2.16
CPNE1Q99829 MIR8081-201ENST00000611533 95 ntBASIC1.58□□□□□ -2.16
CPNE1Q99829 AC091925.1-201ENST00000623204 462 ntBASIC1.58□□□□□ -2.16
CPNE1Q99829 U6.115-201ENST00000636045 103 ntBASIC1.58□□□□□ -2.16
CPNE1Q99829 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
CPNE1Q99829 Y_RNA.27-201ENST00000362540 103 ntBASIC1.57□□□□□ -2.16
CPNE1Q99829 SNORA27.1-201ENST00000362604 124 ntBASIC1.57□□□□□ -2.16
CPNE1Q99829 RNU6-454P-201ENST00000364292 107 ntBASIC1.57□□□□□ -2.16
CPNE1Q99829 Y_RNA.252-201ENST00000364556 101 ntBASIC1.57□□□□□ -2.16
CPNE1Q99829 RNA5SP126-201ENST00000365092 109 ntBASIC1.57□□□□□ -2.16
CPNE1Q99829 SNORA4.2-201ENST00000365313 147 ntBASIC1.57□□□□□ -2.16
CPNE1Q99829 RPL21P1-201ENST00000399532 476 ntBASIC1.57□□□□□ -2.16
CPNE1Q99829 MRPL35P1-201ENST00000404272 572 ntBASIC1.57□□□□□ -2.16
CPNE1Q99829 AC096644.2-201ENST00000429278 159 ntBASIC1.57□□□□□ -2.16
CPNE1Q99829 RPS27P1-201ENST00000450552 247 ntBASIC1.57□□□□□ -2.16
CPNE1Q99829 AC027575.1-201ENST00000481064 460 ntBASIC1.57□□□□□ -2.16
CPNE1Q99829 AC097462.1-201ENST00000514125 324 ntBASIC1.57□□□□□ -2.16
CPNE1Q99829 Y_RNA.661-201ENST00000516003 99 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms