Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.73□□□□□ -2.13
LITAFQ99732 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
LITAFQ99732 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
LITAFQ99732 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC1.72□□□□□ -2.13
LITAFQ99732 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
LITAFQ99732 Z82195.2-201ENST00000612348 18351 ntBASIC1.72□□□□□ -2.13
LITAFQ99732 Y_RNA.270-201ENST00000364693 104 ntBASIC1.72□□□□□ -2.13
LITAFQ99732 U8.7-201ENST00000364940 136 ntBASIC1.72□□□□□ -2.13
LITAFQ99732 RNU6-117P-201ENST00000365415 107 ntBASIC1.72□□□□□ -2.13
LITAFQ99732 RNU6-1072P-201ENST00000384703 107 ntBASIC1.72□□□□□ -2.13
LITAFQ99732 RNU6-443P-201ENST00000384780 107 ntBASIC1.72□□□□□ -2.13
LITAFQ99732 AL355497.1-201ENST00000406262 551 ntBASIC1.72□□□□□ -2.13
LITAFQ99732 MIR1253-201ENST00000408273 105 ntBASIC1.72□□□□□ -2.13
LITAFQ99732 COX6CP10-201ENST00000416832 224 ntBASIC1.72□□□□□ -2.13
LITAFQ99732 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC1.72□□□□□ -2.13
LITAFQ99732 HSPE1P21-201ENST00000438283 308 ntBASIC1.72□□□□□ -2.13
LITAFQ99732 AC006028.1-201ENST00000438379 402 ntBASIC1.72□□□□□ -2.13
LITAFQ99732 AC010409.1-201ENST00000487382 476 ntBASIC1.72□□□□□ -2.13
LITAFQ99732 RPL36AP21-201ENST00000490372 323 ntBASIC1.72□□□□□ -2.13
LITAFQ99732 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.72□□□□□ -2.13
LITAFQ99732 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.72□□□□□ -2.13
LITAFQ99732 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.72□□□□□ -2.13
LITAFQ99732 AC011406.1-201ENST00000512440 370 ntBASIC1.72□□□□□ -2.13
LITAFQ99732 SCGB1D5P-201ENST00000515134 247 ntBASIC1.72□□□□□ -2.13
LITAFQ99732 RNU6-63P-201ENST00000516690 95 ntBASIC1.72□□□□□ -2.13
LITAFQ99732 SUMO2P18-201ENST00000518873 252 ntBASIC1.72□□□□□ -2.13
LITAFQ99732 AC022559.1-201ENST00000520905 205 ntBASIC1.72□□□□□ -2.13
LITAFQ99732 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.72□□□□□ -2.13
LITAFQ99732 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC1.72□□□□□ -2.13
LITAFQ99732 AC100767.1-201ENST00000528178 123 ntBASIC1.72□□□□□ -2.13
LITAFQ99732 CYCSP26-201ENST00000534107 320 ntBASIC1.72□□□□□ -2.13
LITAFQ99732 MIR4446-201ENST00000578505 67 ntBASIC1.72□□□□□ -2.13
LITAFQ99732 MIR4438-201ENST00000585271 93 ntBASIC1.72□□□□□ -2.13
LITAFQ99732 HNRNPDLP4-201ENST00000605144 301 ntBASIC1.72□□□□□ -2.13
LITAFQ99732 AC004832.4-201ENST00000608952 331 ntBASIC1.72□□□□□ -2.13
LITAFQ99732 AC083809.1-201ENST00000615051 472 ntBASIC1.72□□□□□ -2.13
LITAFQ99732 AC068647.2-201ENST00000637380 353 ntBASIC1.72□□□□□ -2.13
LITAFQ99732 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC1.72□□□□□ -2.13
LITAFQ99732 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
LITAFQ99732 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.72□□□□□ -2.13
LITAFQ99732 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
LITAFQ99732 AC005336.3-201ENST00000623833 2679 ntBASIC1.72□□□□□ -2.13
LITAFQ99732 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
LITAFQ99732 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
LITAFQ99732 RNU1-22P-201ENST00000363334 158 ntBASIC1.71□□□□□ -2.14
LITAFQ99732 RNU6-682P-201ENST00000363843 106 ntBASIC1.71□□□□□ -2.14
LITAFQ99732 RNU6-886P-201ENST00000384319 105 ntBASIC1.71□□□□□ -2.14
LITAFQ99732 RNU6-160P-201ENST00000384591 107 ntBASIC1.71□□□□□ -2.14
LITAFQ99732 MIR518C-201ENST00000384822 101 ntBASIC1.71□□□□□ -2.14
LITAFQ99732 SNORA40.19-201ENST00000390846 128 ntBASIC1.71□□□□□ -2.14
LITAFQ99732 AC010154.1-201ENST00000425857 269 ntBASIC1.71□□□□□ -2.14
LITAFQ99732 HMGN2P34-201ENST00000437647 269 ntBASIC1.71□□□□□ -2.14
LITAFQ99732 AL353689.1-201ENST00000438895 199 ntBASIC1.71□□□□□ -2.14
LITAFQ99732 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC1.71□□□□□ -2.14
LITAFQ99732 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.71□□□□□ -2.14
LITAFQ99732 RNU1-131P-201ENST00000458943 161 ntBASIC1.71□□□□□ -2.14
LITAFQ99732 AC097462.1-201ENST00000514125 324 ntBASIC1.71□□□□□ -2.14
LITAFQ99732 RNU6-1146P-201ENST00000516282 102 ntBASIC1.71□□□□□ -2.14
LITAFQ99732 RNU7-115P-201ENST00000516433 55 ntBASIC1.71□□□□□ -2.14
LITAFQ99732 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.71□□□□□ -2.14
LITAFQ99732 AL137100.2-201ENST00000555786 315 ntBASIC1.71□□□□□ -2.14
LITAFQ99732 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC1.71□□□□□ -2.14
LITAFQ99732 AC072026.1-201ENST00000605023 201 ntBASIC1.71□□□□□ -2.14
LITAFQ99732 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
LITAFQ99732 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
LITAFQ99732 ZNF720P1-201ENST00000562403 1939 ntBASIC1.7□□□□□ -2.14
LITAFQ99732 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
LITAFQ99732 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC1.7□□□□□ -2.14
LITAFQ99732 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.7□□□□□ -2.14
LITAFQ99732 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
LITAFQ99732 snoU2-30.2-201ENST00000362805 70 ntBASIC1.7□□□□□ -2.14
LITAFQ99732 RNU6-1205P-201ENST00000363625 106 ntBASIC1.7□□□□□ -2.14
LITAFQ99732 Y_RNA.180-201ENST00000363867 113 ntBASIC1.7□□□□□ -2.14
LITAFQ99732 RNU4-10P-201ENST00000364383 140 ntBASIC1.7□□□□□ -2.14
LITAFQ99732 Y_RNA.233-201ENST00000364407 101 ntBASIC1.7□□□□□ -2.14
LITAFQ99732 Y_RNA.293-201ENST00000364908 93 ntBASIC1.7□□□□□ -2.14
LITAFQ99732 Y_RNA.435-201ENST00000384095 112 ntBASIC1.7□□□□□ -2.14
LITAFQ99732 RNU1-148P-201ENST00000384472 162 ntBASIC1.7□□□□□ -2.14
LITAFQ99732 RNU6-417P-201ENST00000384712 107 ntBASIC1.7□□□□□ -2.14
LITAFQ99732 PCNPP3-201ENST00000393579 471 ntBASIC1.7□□□□□ -2.14
LITAFQ99732 RNA5SP511-201ENST00000410487 115 ntBASIC1.7□□□□□ -2.14
LITAFQ99732 RN7SKP284-201ENST00000411002 343 ntBASIC1.7□□□□□ -2.14
LITAFQ99732 AC004975.1-201ENST00000428733 208 ntBASIC1.7□□□□□ -2.14
LITAFQ99732 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.7□□□□□ -2.14
LITAFQ99732 AL133547.1-201ENST00000448546 220 ntBASIC1.7□□□□□ -2.14
LITAFQ99732 AC117454.1-201ENST00000491120 168 ntBASIC1.7□□□□□ -2.14
LITAFQ99732 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.7□□□□□ -2.14
LITAFQ99732 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.7□□□□□ -2.14
LITAFQ99732 RNU6-1041P-201ENST00000516254 102 ntBASIC1.7□□□□□ -2.14
LITAFQ99732 RNU6-861P-201ENST00000516745 106 ntBASIC1.7□□□□□ -2.14
LITAFQ99732 AC015720.1-201ENST00000565251 277 ntBASIC1.7□□□□□ -2.14
LITAFQ99732 AC026271.5-201ENST00000577873 130 ntBASIC1.7□□□□□ -2.14
LITAFQ99732 AC005972.2-201ENST00000604690 348 ntBASIC1.7□□□□□ -2.14
LITAFQ99732 MIR7112-201ENST00000616126 65 ntBASIC1.7□□□□□ -2.14
LITAFQ99732 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC1.7□□□□□ -2.14
LITAFQ99732 MIR548AY-201ENST00000617669 107 ntBASIC1.7□□□□□ -2.14
LITAFQ99732 U6.73-201ENST00000619194 103 ntBASIC1.7□□□□□ -2.14
LITAFQ99732 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
LITAFQ99732 RNA5SP393-201ENST00000363423 117 ntBASIC1.69□□□□□ -2.14
LITAFQ99732 SNORA38-201ENST00000363946 132 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms