Protein–RNA interactions for Protein: Q96SB8

SMC6, Structural maintenance of chromosomes protein 6, humanhuman

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6Q96SB8 RNU2-1-201ENST00000618664 191 ntBASIC1.95□□□□□ -2.1
SMC6Q96SB8 U2.6-201ENST00000619225 191 ntBASIC1.95□□□□□ -2.1
SMC6Q96SB8 U2.5-201ENST00000619465 191 ntBASIC1.95□□□□□ -2.1
SMC6Q96SB8 U2.10-201ENST00000620268 191 ntBASIC1.95□□□□□ -2.1
SMC6Q96SB8 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SMC6Q96SB8 AC091812.1-201ENST00000432235 1948 ntBASIC1.94□□□□□ -2.1
SMC6Q96SB8 Y_RNA.202-201ENST00000364083 110 ntBASIC1.94□□□□□ -2.1
SMC6Q96SB8 SNORA33.2-201ENST00000365413 134 ntBASIC1.94□□□□□ -2.1
SMC6Q96SB8 SNORA67.3-201ENST00000384366 140 ntBASIC1.94□□□□□ -2.1
SMC6Q96SB8 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
SMC6Q96SB8 AL079342.1-201ENST00000401460 267 ntBASIC1.94□□□□□ -2.1
SMC6Q96SB8 AC060773.1-201ENST00000421698 310 ntBASIC1.94□□□□□ -2.1
SMC6Q96SB8 RAB28P5-201ENST00000427490 651 ntBASIC1.94□□□□□ -2.1
SMC6Q96SB8 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.94□□□□□ -2.1
SMC6Q96SB8 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.94□□□□□ -2.1
SMC6Q96SB8 RPL23AP42-201ENST00000471152 471 ntBASIC1.94□□□□□ -2.1
SMC6Q96SB8 AC040926.1-201ENST00000530195 238 ntBASIC1.94□□□□□ -2.1
SMC6Q96SB8 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
SMC6Q96SB8 MIR3684-201ENST00000579779 74 ntBASIC1.94□□□□□ -2.1
SMC6Q96SB8 MIR4423-201ENST00000580922 80 ntBASIC1.94□□□□□ -2.1
SMC6Q96SB8 AC104695.3-201ENST00000604052 296 ntBASIC1.94□□□□□ -2.1
SMC6Q96SB8 AC240442.1-201ENST00000616055 283 ntBASIC1.94□□□□□ -2.1
SMC6Q96SB8 RNU6-961P-201ENST00000363893 105 ntBASIC1.93□□□□□ -2.1
SMC6Q96SB8 RNU4-50P-201ENST00000364361 141 ntBASIC1.93□□□□□ -2.1
SMC6Q96SB8 Y_RNA.326-201ENST00000365176 113 ntBASIC1.93□□□□□ -2.1
SMC6Q96SB8 Y_RNA.361-201ENST00000365515 120 ntBASIC1.93□□□□□ -2.1
SMC6Q96SB8 SNORA63.7-201ENST00000365579 123 ntBASIC1.93□□□□□ -2.1
SMC6Q96SB8 SNORD14.1-201ENST00000365609 90 ntBASIC1.93□□□□□ -2.1
SMC6Q96SB8 Y_RNA.458-201ENST00000384240 102 ntBASIC1.93□□□□□ -2.1
SMC6Q96SB8 MIR1289-2-201ENST00000408360 111 ntBASIC1.93□□□□□ -2.1
SMC6Q96SB8 RNU6-57P-201ENST00000411348 103 ntBASIC1.93□□□□□ -2.1
SMC6Q96SB8 RNU6-625P-201ENST00000459412 107 ntBASIC1.93□□□□□ -2.1
SMC6Q96SB8 RNVU1-2-201ENST00000516326 135 ntBASIC1.93□□□□□ -2.1
SMC6Q96SB8 AL442663.2-201ENST00000554385 511 ntBASIC1.93□□□□□ -2.1
SMC6Q96SB8 MIR4299-201ENST00000577899 72 ntBASIC1.93□□□□□ -2.1
SMC6Q96SB8 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.93□□□□□ -2.1
SMC6Q96SB8 MIR4659A-201ENST00000580269 81 ntBASIC1.93□□□□□ -2.1
SMC6Q96SB8 MIR4524B-201ENST00000581569 115 ntBASIC1.93□□□□□ -2.1
SMC6Q96SB8 AC005828.6-201ENST00000606610 232 ntBASIC1.93□□□□□ -2.1
SMC6Q96SB8 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.93□□□□□ -2.1
SMC6Q96SB8 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.93□□□□□ -2.1
SMC6Q96SB8 ZNF72P-201ENST00000425869 1908 ntBASIC1.93□□□□□ -2.1
SMC6Q96SB8 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.92□□□□□ -2.1
SMC6Q96SB8 Y_RNA.230-201ENST00000364348 109 ntBASIC1.92□□□□□ -2.1
SMC6Q96SB8 RNU6-1011P-201ENST00000384668 107 ntBASIC1.92□□□□□ -2.1
SMC6Q96SB8 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
SMC6Q96SB8 SNORA48.1-201ENST00000390879 135 ntBASIC1.92□□□□□ -2.1
SMC6Q96SB8 RNU6-823P-201ENST00000391042 103 ntBASIC1.92□□□□□ -2.1
SMC6Q96SB8 AL023284.1-201ENST00000403956 276 ntBASIC1.92□□□□□ -2.1
SMC6Q96SB8 AC008134.1-201ENST00000420943 193 ntBASIC1.92□□□□□ -2.1
SMC6Q96SB8 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
SMC6Q96SB8 RPEP5-201ENST00000441137 268 ntBASIC1.92□□□□□ -2.1
SMC6Q96SB8 RNU6-1041P-201ENST00000516254 102 ntBASIC1.92□□□□□ -2.1
SMC6Q96SB8 Y_RNA.721-201ENST00000517207 102 ntBASIC1.92□□□□□ -2.1
SMC6Q96SB8 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.92□□□□□ -2.1
SMC6Q96SB8 HSBP1P1-201ENST00000555205 166 ntBASIC1.92□□□□□ -2.1
SMC6Q96SB8 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.92□□□□□ -2.1
SMC6Q96SB8 AC006001.4-201ENST00000622243 395 ntBASIC1.92□□□□□ -2.1
SMC6Q96SB8 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.92□□□□□ -2.1
SMC6Q96SB8 MIR3674-201ENST00000636576 68 ntBASIC1.92□□□□□ -2.1
SMC6Q96SB8 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
SMC6Q96SB8 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
SMC6Q96SB8 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
SMC6Q96SB8 RNA5SP432-201ENST00000362480 116 ntBASIC1.91□□□□□ -2.1
SMC6Q96SB8 RNU6-454P-201ENST00000364292 107 ntBASIC1.91□□□□□ -2.1
SMC6Q96SB8 RNU6-1310P-201ENST00000384153 107 ntBASIC1.91□□□□□ -2.1
SMC6Q96SB8 Y_RNA.551-201ENST00000384661 102 ntBASIC1.91□□□□□ -2.1
SMC6Q96SB8 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.91□□□□□ -2.1
SMC6Q96SB8 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
SMC6Q96SB8 AC011406.1-201ENST00000512440 370 ntBASIC1.91□□□□□ -2.1
SMC6Q96SB8 RNU6-107P-201ENST00000516643 102 ntBASIC1.91□□□□□ -2.1
SMC6Q96SB8 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.91□□□□□ -2.1
SMC6Q96SB8 MIR4680-201ENST00000580906 66 ntBASIC1.91□□□□□ -2.1
SMC6Q96SB8 AL390123.1-201ENST00000603216 237 ntBASIC1.91□□□□□ -2.1
SMC6Q96SB8 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.91□□□□□ -2.1
SMC6Q96SB8 AC006435.5-201ENST00000624486 112 ntBASIC1.91□□□□□ -2.1
SMC6Q96SB8 SNORD114-7-201ENST00000362520 77 ntBASIC1.9□□□□□ -2.11
SMC6Q96SB8 RNU6-862P-201ENST00000362804 105 ntBASIC1.9□□□□□ -2.11
SMC6Q96SB8 snoU2-30.2-201ENST00000362805 70 ntBASIC1.9□□□□□ -2.11
SMC6Q96SB8 Y_RNA.462-201ENST00000384268 102 ntBASIC1.9□□□□□ -2.11
SMC6Q96SB8 Y_RNA.498-201ENST00000384460 102 ntBASIC1.9□□□□□ -2.11
SMC6Q96SB8 MIR1252-201ENST00000408861 65 ntBASIC1.9□□□□□ -2.11
SMC6Q96SB8 RNU2-20P-201ENST00000410425 191 ntBASIC1.9□□□□□ -2.11
SMC6Q96SB8 ATP5J2P3-201ENST00000451550 258 ntBASIC1.9□□□□□ -2.11
SMC6Q96SB8 RNA5SP57-201ENST00000459463 123 ntBASIC1.9□□□□□ -2.11
SMC6Q96SB8 RNU6-408P-201ENST00000515910 100 ntBASIC1.9□□□□□ -2.11
SMC6Q96SB8 Y_RNA.713-201ENST00000517013 96 ntBASIC1.9□□□□□ -2.11
SMC6Q96SB8 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.9□□□□□ -2.11
SMC6Q96SB8 AC024614.2-201ENST00000577584 372 ntBASIC1.9□□□□□ -2.11
SMC6Q96SB8 RPS29P30-201ENST00000600975 111 ntBASIC1.9□□□□□ -2.11
SMC6Q96SB8 SNRPGP19-201ENST00000603826 189 ntBASIC1.9□□□□□ -2.11
SMC6Q96SB8 PART1_1.1-201ENST00000611761 217 ntBASIC1.9□□□□□ -2.11
SMC6Q96SB8 MIR338-201ENST00000636369 67 ntBASIC1.9□□□□□ -2.11
SMC6Q96SB8 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.9□□□□□ -2.11
SMC6Q96SB8 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
SMC6Q96SB8 Y_RNA.243-201ENST00000364481 109 ntBASIC1.89□□□□□ -2.11
SMC6Q96SB8 SNORA16.1-201ENST00000364597 132 ntBASIC1.89□□□□□ -2.11
SMC6Q96SB8 Y_RNA.276-201ENST00000364732 109 ntBASIC1.89□□□□□ -2.11
SMC6Q96SB8 RNU6-1240P-201ENST00000365155 104 ntBASIC1.89□□□□□ -2.11
SMC6Q96SB8 Y_RNA.380-201ENST00000365663 111 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms