Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.42□□□□□ -2.18
RAB40CQ96S21 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.42□□□□□ -2.18
RAB40CQ96S21 MIR4438-201ENST00000585271 93 ntBASIC1.42□□□□□ -2.18
RAB40CQ96S21 AC006435.5-201ENST00000624486 112 ntBASIC1.42□□□□□ -2.18
RAB40CQ96S21 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.42□□□□□ -2.18
RAB40CQ96S21 RNU6-490P-201ENST00000362985 107 ntBASIC1.41□□□□□ -2.18
RAB40CQ96S21 Y_RNA.314-201ENST00000365114 102 ntBASIC1.41□□□□□ -2.18
RAB40CQ96S21 RNU6-1040P-201ENST00000383974 107 ntBASIC1.41□□□□□ -2.18
RAB40CQ96S21 MIR504-201ENST00000385065 83 ntBASIC1.41□□□□□ -2.18
RAB40CQ96S21 MIR559-201ENST00000385188 96 ntBASIC1.41□□□□□ -2.18
RAB40CQ96S21 Y_RNA.605-201ENST00000410577 105 ntBASIC1.41□□□□□ -2.18
RAB40CQ96S21 RPS20P15-201ENST00000412792 311 ntBASIC1.41□□□□□ -2.18
RAB40CQ96S21 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.41□□□□□ -2.18
RAB40CQ96S21 MTCO2P27-201ENST00000420740 428 ntBASIC1.41□□□□□ -2.18
RAB40CQ96S21 RAB28P5-201ENST00000427490 651 ntBASIC1.41□□□□□ -2.18
RAB40CQ96S21 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.41□□□□□ -2.18
RAB40CQ96S21 AC007677.1-201ENST00000445757 515 ntBASIC1.41□□□□□ -2.18
RAB40CQ96S21 MRPS10P1-201ENST00000448483 130 ntBASIC1.41□□□□□ -2.18
RAB40CQ96S21 RNU7-34P-201ENST00000459394 64 ntBASIC1.41□□□□□ -2.18
RAB40CQ96S21 RNU7-169P-201ENST00000459456 61 ntBASIC1.41□□□□□ -2.18
RAB40CQ96S21 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.41□□□□□ -2.18
RAB40CQ96S21 RNA5SP445-201ENST00000515889 115 ntBASIC1.41□□□□□ -2.18
RAB40CQ96S21 RNU1-41P-201ENST00000516161 162 ntBASIC1.41□□□□□ -2.18
RAB40CQ96S21 RNU1-48P-201ENST00000516400 162 ntBASIC1.41□□□□□ -2.18
RAB40CQ96S21 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.41□□□□□ -2.18
RAB40CQ96S21 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.41□□□□□ -2.18
RAB40CQ96S21 MIR4709-201ENST00000577272 72 ntBASIC1.41□□□□□ -2.18
RAB40CQ96S21 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.41□□□□□ -2.18
RAB40CQ96S21 AC084781.2-201ENST00000615568 161 ntBASIC1.41□□□□□ -2.18
RAB40CQ96S21 MIR6715A-201ENST00000615929 79 ntBASIC1.41□□□□□ -2.18
RAB40CQ96S21 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
RAB40CQ96S21 ICE2P2-201ENST00000483823 2787 ntBASIC1.4□□□□□ -2.19
RAB40CQ96S21 MIR410-201ENST00000362222 80 ntBASIC1.4□□□□□ -2.19
RAB40CQ96S21 SNORD33-201ENST00000362761 85 ntBASIC1.4□□□□□ -2.19
RAB40CQ96S21 RNY3P11-201ENST00000364153 102 ntBASIC1.4□□□□□ -2.19
RAB40CQ96S21 SNORA20B-201ENST00000384220 132 ntBASIC1.4□□□□□ -2.19
RAB40CQ96S21 AL079342.1-201ENST00000401460 267 ntBASIC1.4□□□□□ -2.19
RAB40CQ96S21 RNA5SP475-201ENST00000410568 110 ntBASIC1.4□□□□□ -2.19
RAB40CQ96S21 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.4□□□□□ -2.19
RAB40CQ96S21 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.4□□□□□ -2.19
RAB40CQ96S21 AC099799.1-201ENST00000439809 192 ntBASIC1.4□□□□□ -2.19
RAB40CQ96S21 AL606517.2-201ENST00000442855 241 ntBASIC1.4□□□□□ -2.19
RAB40CQ96S21 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.4□□□□□ -2.19
RAB40CQ96S21 AC010469.2-201ENST00000496412 480 ntBASIC1.4□□□□□ -2.19
RAB40CQ96S21 RNU7-99P-201ENST00000516271 62 ntBASIC1.4□□□□□ -2.19
RAB40CQ96S21 RNU7-128P-201ENST00000517247 62 ntBASIC1.4□□□□□ -2.19
RAB40CQ96S21 AP002001.1-203ENST00000534002 267 ntBASIC1.4□□□□□ -2.19
RAB40CQ96S21 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
RAB40CQ96S21 MIR3684-201ENST00000579779 74 ntBASIC1.4□□□□□ -2.19
RAB40CQ96S21 AP001094.1-201ENST00000579805 193 ntBASIC1.4□□□□□ -2.19
RAB40CQ96S21 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.4□□□□□ -2.19
RAB40CQ96S21 MIR3674-201ENST00000636576 68 ntBASIC1.4□□□□□ -2.19
RAB40CQ96S21 MTND5P10-201ENST00000603719 1809 ntBASIC1.4□□□□□ -2.19
RAB40CQ96S21 SNORD114-1-201ENST00000362705 72 ntBASIC1.39□□□□□ -2.19
RAB40CQ96S21 RNU6-203P-201ENST00000384038 104 ntBASIC1.39□□□□□ -2.19
RAB40CQ96S21 RNU6-950P-201ENST00000384651 107 ntBASIC1.39□□□□□ -2.19
RAB40CQ96S21 RPL21P1-201ENST00000399532 476 ntBASIC1.39□□□□□ -2.19
RAB40CQ96S21 AL355796.1-201ENST00000406706 323 ntBASIC1.39□□□□□ -2.19
RAB40CQ96S21 RPS27P1-201ENST00000450552 247 ntBASIC1.39□□□□□ -2.19
RAB40CQ96S21 snoU13.15-201ENST00000459407 104 ntBASIC1.39□□□□□ -2.19
RAB40CQ96S21 SNORD19B-201ENST00000459623 84 ntBASIC1.39□□□□□ -2.19
RAB40CQ96S21 RNA5SP182-201ENST00000516064 82 ntBASIC1.39□□□□□ -2.19
RAB40CQ96S21 RNU6-699P-201ENST00000517081 110 ntBASIC1.39□□□□□ -2.19
RAB40CQ96S21 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.39□□□□□ -2.19
RAB40CQ96S21 AC093027.1-201ENST00000546698 429 ntBASIC1.39□□□□□ -2.19
RAB40CQ96S21 DEFB122-202ENST00000569013 197 ntBASIC1.39□□□□□ -2.19
RAB40CQ96S21 AC022217.4-201ENST00000604389 163 ntBASIC1.39□□□□□ -2.19
RAB40CQ96S21 MIR8063-201ENST00000621930 81 ntBASIC1.39□□□□□ -2.19
RAB40CQ96S21 AC095038.3-201ENST00000634439 195 ntBASIC1.39□□□□□ -2.19
RAB40CQ96S21 AC112487.2-201ENST00000637950 304 ntBASIC1.39□□□□□ -2.19
RAB40CQ96S21 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
RAB40CQ96S21 RNU6-271P-201ENST00000363858 105 ntBASIC1.38□□□□□ -2.19
RAB40CQ96S21 RNA5SP363-201ENST00000365072 115 ntBASIC1.38□□□□□ -2.19
RAB40CQ96S21 RNU6-926P-201ENST00000384075 107 ntBASIC1.38□□□□□ -2.19
RAB40CQ96S21 RNU6-997P-201ENST00000384725 107 ntBASIC1.38□□□□□ -2.19
RAB40CQ96S21 MIR628-201ENST00000385229 95 ntBASIC1.38□□□□□ -2.19
RAB40CQ96S21 AC245047.3-201ENST00000429428 127 ntBASIC1.38□□□□□ -2.19
RAB40CQ96S21 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.38□□□□□ -2.19
RAB40CQ96S21 AC236972.2-201ENST00000434979 310 ntBASIC1.38□□□□□ -2.19
RAB40CQ96S21 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.38□□□□□ -2.19
RAB40CQ96S21 RNU7-152P-201ENST00000458982 64 ntBASIC1.38□□□□□ -2.19
RAB40CQ96S21 RPS26P55-201ENST00000471178 356 ntBASIC1.38□□□□□ -2.19
RAB40CQ96S21 RNU6-902P-201ENST00000517212 91 ntBASIC1.38□□□□□ -2.19
RAB40CQ96S21 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.38□□□□□ -2.19
RAB40CQ96S21 AL442163.3-201ENST00000554110 156 ntBASIC1.38□□□□□ -2.19
RAB40CQ96S21 AL929325.1-201ENST00000603096 117 ntBASIC1.38□□□□□ -2.19
RAB40CQ96S21 Y_RNA.804-201ENST00000615262 101 ntBASIC1.38□□□□□ -2.19
RAB40CQ96S21 U2.1-201ENST00000618978 145 ntBASIC1.38□□□□□ -2.19
RAB40CQ96S21 MIR302D-201ENST00000362275 68 ntBASIC1.37□□□□□ -2.19
RAB40CQ96S21 Y_RNA.187-201ENST00000363918 113 ntBASIC1.37□□□□□ -2.19
RAB40CQ96S21 RNU6-407P-201ENST00000365280 104 ntBASIC1.37□□□□□ -2.19
RAB40CQ96S21 RNU6-1310P-201ENST00000384153 107 ntBASIC1.37□□□□□ -2.19
RAB40CQ96S21 RNY3P4-201ENST00000384428 101 ntBASIC1.37□□□□□ -2.19
RAB40CQ96S21 SNORA40.18-201ENST00000391200 128 ntBASIC1.37□□□□□ -2.19
RAB40CQ96S21 AC010154.1-201ENST00000425857 269 ntBASIC1.37□□□□□ -2.19
RAB40CQ96S21 FCF1P4-201ENST00000448326 183 ntBASIC1.37□□□□□ -2.19
RAB40CQ96S21 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.37□□□□□ -2.19
RAB40CQ96S21 RNU1-98P-201ENST00000458992 160 ntBASIC1.37□□□□□ -2.19
RAB40CQ96S21 AC097462.1-201ENST00000514125 324 ntBASIC1.37□□□□□ -2.19
RAB40CQ96S21 RNU6-408P-201ENST00000515910 100 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms