Protein–RNA interactions for Protein: Q96MN9

ZNF488, Zinc finger protein 488, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF488Q96MN9 USP9YP30-201ENST00000430729 455 ntBASIC0.91□□□□□ -2.26
ZNF488Q96MN9 MTND3P23-201ENST00000431980 347 ntBASIC0.91□□□□□ -2.26
ZNF488Q96MN9 RPS29P28-201ENST00000446439 141 ntBASIC0.91□□□□□ -2.26
ZNF488Q96MN9 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.91□□□□□ -2.26
ZNF488Q96MN9 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.91□□□□□ -2.26
ZNF488Q96MN9 SNORD5.1-201ENST00000458800 75 ntBASIC0.91□□□□□ -2.26
ZNF488Q96MN9 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.91□□□□□ -2.26
ZNF488Q96MN9 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.91□□□□□ -2.26
ZNF488Q96MN9 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.91□□□□□ -2.26
ZNF488Q96MN9 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.91□□□□□ -2.26
ZNF488Q96MN9 RNU6-1114P-201ENST00000516022 107 ntBASIC0.91□□□□□ -2.26
ZNF488Q96MN9 RNU7-99P-201ENST00000516271 62 ntBASIC0.91□□□□□ -2.26
ZNF488Q96MN9 MIR4273-201ENST00000582824 84 ntBASIC0.91□□□□□ -2.26
ZNF488Q96MN9 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.91□□□□□ -2.26
ZNF488Q96MN9 AC010999.1-201ENST00000611856 324 ntBASIC0.91□□□□□ -2.26
ZNF488Q96MN9 AC093783.1-201ENST00000612976 329 ntBASIC0.91□□□□□ -2.26
ZNF488Q96MN9 MIR3688-2-201ENST00000636963 87 ntBASIC0.91□□□□□ -2.26
ZNF488Q96MN9 MIR3662-201ENST00000637030 95 ntBASIC0.91□□□□□ -2.26
ZNF488Q96MN9 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
ZNF488Q96MN9 Y_RNA.48-201ENST00000362710 103 ntBASIC0.9□□□□□ -2.27
ZNF488Q96MN9 RNU6-1266P-201ENST00000362794 105 ntBASIC0.9□□□□□ -2.27
ZNF488Q96MN9 Y_RNA.269-201ENST00000364685 89 ntBASIC0.9□□□□□ -2.27
ZNF488Q96MN9 RNU6-281P-201ENST00000384212 103 ntBASIC0.9□□□□□ -2.27
ZNF488Q96MN9 MRPL42P3-201ENST00000401492 326 ntBASIC0.9□□□□□ -2.27
ZNF488Q96MN9 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.9□□□□□ -2.27
ZNF488Q96MN9 USMG5P1-201ENST00000425964 177 ntBASIC0.9□□□□□ -2.27
ZNF488Q96MN9 AC245047.3-201ENST00000429428 127 ntBASIC0.9□□□□□ -2.27
ZNF488Q96MN9 MTND4LP16-201ENST00000440828 295 ntBASIC0.9□□□□□ -2.27
ZNF488Q96MN9 SNORD65B-201ENST00000459126 73 ntBASIC0.9□□□□□ -2.27
ZNF488Q96MN9 HMGN1P7-201ENST00000491722 313 ntBASIC0.9□□□□□ -2.27
ZNF488Q96MN9 RNU1-54P-201ENST00000517181 120 ntBASIC0.9□□□□□ -2.27
ZNF488Q96MN9 AC091144.1-201ENST00000519573 138 ntBASIC0.9□□□□□ -2.27
ZNF488Q96MN9 MIR3664-201ENST00000579074 99 ntBASIC0.9□□□□□ -2.27
ZNF488Q96MN9 MIR5695-201ENST00000579717 85 ntBASIC0.9□□□□□ -2.27
ZNF488Q96MN9 SNORD114-21-201ENST00000606412 72 ntBASIC0.9□□□□□ -2.27
ZNF488Q96MN9 AC006435.5-201ENST00000624486 112 ntBASIC0.9□□□□□ -2.27
ZNF488Q96MN9 AC018630.2-201ENST00000534866 2403 ntBASIC0.9□□□□□ -2.27
ZNF488Q96MN9 Y_RNA.224-201ENST00000364308 111 ntBASIC0.89□□□□□ -2.27
ZNF488Q96MN9 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
ZNF488Q96MN9 RNU6-440P-201ENST00000390882 105 ntBASIC0.89□□□□□ -2.27
ZNF488Q96MN9 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
ZNF488Q96MN9 MRPS10P1-201ENST00000448483 130 ntBASIC0.89□□□□□ -2.27
ZNF488Q96MN9 Y_RNA.683-201ENST00000516508 93 ntBASIC0.89□□□□□ -2.27
ZNF488Q96MN9 RN7SKP88-201ENST00000516847 250 ntBASIC0.89□□□□□ -2.27
ZNF488Q96MN9 APOOP3-201ENST00000536787 586 ntBASIC0.89□□□□□ -2.27
ZNF488Q96MN9 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.89□□□□□ -2.27
ZNF488Q96MN9 MIR5701-3-201ENST00000578890 82 ntBASIC0.89□□□□□ -2.27
ZNF488Q96MN9 MIR5701-1-201ENST00000585138 82 ntBASIC0.89□□□□□ -2.27
ZNF488Q96MN9 MIR4295-201ENST00000585286 85 ntBASIC0.89□□□□□ -2.27
ZNF488Q96MN9 AC100812.1-201ENST00000607622 580 ntBASIC0.89□□□□□ -2.27
ZNF488Q96MN9 7SK.8-201ENST00000612110 250 ntBASIC0.89□□□□□ -2.27
ZNF488Q96MN9 7SK.11-201ENST00000615477 250 ntBASIC0.89□□□□□ -2.27
ZNF488Q96MN9 MIR5701-2-201ENST00000615634 82 ntBASIC0.89□□□□□ -2.27
ZNF488Q96MN9 AL513423.1-201ENST00000621695 132 ntBASIC0.89□□□□□ -2.27
ZNF488Q96MN9 7SK.13-201ENST00000622040 250 ntBASIC0.89□□□□□ -2.27
ZNF488Q96MN9 AC068647.2-201ENST00000637380 353 ntBASIC0.89□□□□□ -2.27
ZNF488Q96MN9 RNU6-222P-201ENST00000362438 107 ntBASIC0.88□□□□□ -2.27
ZNF488Q96MN9 Y_RNA.184-201ENST00000363884 108 ntBASIC0.88□□□□□ -2.27
ZNF488Q96MN9 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
ZNF488Q96MN9 AL139396.1-201ENST00000421137 167 ntBASIC0.88□□□□□ -2.27
ZNF488Q96MN9 USP9YP16-201ENST00000430287 407 ntBASIC0.88□□□□□ -2.27
ZNF488Q96MN9 USP9YP23-201ENST00000455085 407 ntBASIC0.88□□□□□ -2.27
ZNF488Q96MN9 RNU7-94P-201ENST00000459576 63 ntBASIC0.88□□□□□ -2.27
ZNF488Q96MN9 RPL39P38-201ENST00000467018 153 ntBASIC0.88□□□□□ -2.27
ZNF488Q96MN9 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.88□□□□□ -2.27
ZNF488Q96MN9 MTND5P5-201ENST00000503764 376 ntBASIC0.88□□□□□ -2.27
ZNF488Q96MN9 UBL5P1-201ENST00000507979 193 ntBASIC0.88□□□□□ -2.27
ZNF488Q96MN9 RNU4-49P-201ENST00000516080 140 ntBASIC0.88□□□□□ -2.27
ZNF488Q96MN9 Y_RNA.706-201ENST00000516933 99 ntBASIC0.88□□□□□ -2.27
ZNF488Q96MN9 RNU6-165P-201ENST00000517170 99 ntBASIC0.88□□□□□ -2.27
ZNF488Q96MN9 CBX3P8-201ENST00000532412 525 ntBASIC0.88□□□□□ -2.27
ZNF488Q96MN9 MIR4438-201ENST00000585271 93 ntBASIC0.88□□□□□ -2.27
ZNF488Q96MN9 AC125232.2-201ENST00000592457 143 ntBASIC0.88□□□□□ -2.27
ZNF488Q96MN9 MIR6128-201ENST00000615528 109 ntBASIC0.88□□□□□ -2.27
ZNF488Q96MN9 AC106754.2-201ENST00000623006 233 ntBASIC0.88□□□□□ -2.27
ZNF488Q96MN9 AC027335.2-201ENST00000624030 375 ntBASIC0.88□□□□□ -2.27
ZNF488Q96MN9 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.88□□□□□ -2.27
ZNF488Q96MN9 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
ZNF488Q96MN9 RNU4-40P-201ENST00000364351 143 ntBASIC0.87□□□□□ -2.27
ZNF488Q96MN9 Y_RNA.453-201ENST00000384223 109 ntBASIC0.87□□□□□ -2.27
ZNF488Q96MN9 Y_RNA.473-201ENST00000384333 102 ntBASIC0.87□□□□□ -2.27
ZNF488Q96MN9 SNORA25-201ENST00000384384 134 ntBASIC0.87□□□□□ -2.27
ZNF488Q96MN9 SNORD115-47-201ENST00000391226 86 ntBASIC0.87□□□□□ -2.27
ZNF488Q96MN9 AL034345.1-201ENST00000407768 123 ntBASIC0.87□□□□□ -2.27
ZNF488Q96MN9 RNU6-1001P-201ENST00000411265 100 ntBASIC0.87□□□□□ -2.27
ZNF488Q96MN9 MRPL35P3-201ENST00000421557 364 ntBASIC0.87□□□□□ -2.27
ZNF488Q96MN9 DYNLT3P2-201ENST00000442517 295 ntBASIC0.87□□□□□ -2.27
ZNF488Q96MN9 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.87□□□□□ -2.27
ZNF488Q96MN9 AC087343.1-201ENST00000477341 475 ntBASIC0.87□□□□□ -2.27
ZNF488Q96MN9 AC023157.2-201ENST00000540596 141 ntBASIC0.87□□□□□ -2.27
ZNF488Q96MN9 AC093023.1-201ENST00000547375 507 ntBASIC0.87□□□□□ -2.27
ZNF488Q96MN9 MIR4790-201ENST00000577799 79 ntBASIC0.87□□□□□ -2.27
ZNF488Q96MN9 AC018462.2-201ENST00000605375 395 ntBASIC0.87□□□□□ -2.27
ZNF488Q96MN9 AL021879.1-201ENST00000611756 288 ntBASIC0.87□□□□□ -2.27
ZNF488Q96MN9 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.87□□□□□ -2.27
ZNF488Q96MN9 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.87□□□□□ -2.27
ZNF488Q96MN9 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
ZNF488Q96MN9 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.86□□□□□ -2.27
ZNF488Q96MN9 Y_RNA.106-201ENST00000363189 100 ntBASIC0.86□□□□□ -2.27
ZNF488Q96MN9 Y_RNA.191-201ENST00000363972 113 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 333 ms