Protein–RNA interactions for Protein: Q96JN2

CCDC136, Coiled-coil domain-containing protein 136, humanhuman

Predictions only

Length 1,154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC136Q96JN2 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.33□□□□□ -2.04
CCDC136Q96JN2 AC073910.1-201ENST00000445047 438 ntBASIC2.33□□□□□ -2.04
CCDC136Q96JN2 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.33□□□□□ -2.04
CCDC136Q96JN2 AL163195.1-201ENST00000496941 348 ntBASIC2.33□□□□□ -2.04
CCDC136Q96JN2 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.33□□□□□ -2.04
CCDC136Q96JN2 MIR4272-201ENST00000635924 64 ntBASIC2.33□□□□□ -2.04
CCDC136Q96JN2 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
CCDC136Q96JN2 SNORA72.2-201ENST00000365028 127 ntBASIC2.32□□□□□ -2.04
CCDC136Q96JN2 AL355796.1-201ENST00000406706 323 ntBASIC2.32□□□□□ -2.04
CCDC136Q96JN2 AL606517.2-201ENST00000442855 241 ntBASIC2.32□□□□□ -2.04
CCDC136Q96JN2 HMGN2P23-201ENST00000456759 269 ntBASIC2.32□□□□□ -2.04
CCDC136Q96JN2 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.32□□□□□ -2.04
CCDC136Q96JN2 RNU7-128P-201ENST00000517247 62 ntBASIC2.32□□□□□ -2.04
CCDC136Q96JN2 AC055872.1-201ENST00000570978 278 ntBASIC2.32□□□□□ -2.04
CCDC136Q96JN2 AC092447.9-201ENST00000603395 144 ntBASIC2.32□□□□□ -2.04
CCDC136Q96JN2 AL359075.3-201ENST00000613288 217 ntBASIC2.32□□□□□ -2.04
CCDC136Q96JN2 MIR3674-201ENST00000636576 68 ntBASIC2.32□□□□□ -2.04
CCDC136Q96JN2 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
CCDC136Q96JN2 RNY3P4-201ENST00000384428 101 ntBASIC2.31□□□□□ -2.04
CCDC136Q96JN2 MIR515-2-201ENST00000384883 83 ntBASIC2.31□□□□□ -2.04
CCDC136Q96JN2 MIR515-1-201ENST00000384884 83 ntBASIC2.31□□□□□ -2.04
CCDC136Q96JN2 RNA5SP109-201ENST00000391010 116 ntBASIC2.31□□□□□ -2.04
CCDC136Q96JN2 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CCDC136Q96JN2 RPS27P22-201ENST00000478056 241 ntBASIC2.31□□□□□ -2.04
CCDC136Q96JN2 AC010469.2-201ENST00000496412 480 ntBASIC2.31□□□□□ -2.04
CCDC136Q96JN2 AL137100.2-201ENST00000555786 315 ntBASIC2.31□□□□□ -2.04
CCDC136Q96JN2 C8orf59P2-201ENST00000603441 271 ntBASIC2.31□□□□□ -2.04
CCDC136Q96JN2 AC116312.1-201ENST00000606841 314 ntBASIC2.31□□□□□ -2.04
CCDC136Q96JN2 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC136Q96JN2 AC091925.1-201ENST00000623204 462 ntBASIC2.31□□□□□ -2.04
CCDC136Q96JN2 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.31□□□□□ -2.04
CCDC136Q96JN2 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.3□□□□□ -2.04
CCDC136Q96JN2 SNORA20B-201ENST00000384220 132 ntBASIC2.3□□□□□ -2.04
CCDC136Q96JN2 AC022028.1-201ENST00000412054 408 ntBASIC2.3□□□□□ -2.04
CCDC136Q96JN2 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.3□□□□□ -2.04
CCDC136Q96JN2 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.3□□□□□ -2.04
CCDC136Q96JN2 RPL26P26-201ENST00000480251 434 ntBASIC2.3□□□□□ -2.04
CCDC136Q96JN2 RNU1-142P-201ENST00000516682 145 ntBASIC2.3□□□□□ -2.04
CCDC136Q96JN2 AC023442.1-201ENST00000531247 422 ntBASIC2.3□□□□□ -2.04
CCDC136Q96JN2 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.3□□□□□ -2.04
CCDC136Q96JN2 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.3□□□□□ -2.04
CCDC136Q96JN2 MIR4285-201ENST00000581001 85 ntBASIC2.3□□□□□ -2.04
CCDC136Q96JN2 MIR4438-201ENST00000585271 93 ntBASIC2.3□□□□□ -2.04
CCDC136Q96JN2 U6.73-201ENST00000619194 103 ntBASIC2.3□□□□□ -2.04
CCDC136Q96JN2 U6.92-201ENST00000636464 89 ntBASIC2.3□□□□□ -2.04
CCDC136Q96JN2 RNU6-661P-201ENST00000362409 107 ntBASIC2.29□□□□□ -2.04
CCDC136Q96JN2 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.29□□□□□ -2.04
CCDC136Q96JN2 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
CCDC136Q96JN2 SNORD78.2-201ENST00000391076 69 ntBASIC2.29□□□□□ -2.04
CCDC136Q96JN2 MIR1261-201ENST00000408659 82 ntBASIC2.29□□□□□ -2.04
CCDC136Q96JN2 RNA5SP475-201ENST00000410568 110 ntBASIC2.29□□□□□ -2.04
CCDC136Q96JN2 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.29□□□□□ -2.04
CCDC136Q96JN2 MRPS10P1-201ENST00000448483 130 ntBASIC2.29□□□□□ -2.04
CCDC136Q96JN2 AC005908.1-201ENST00000468701 347 ntBASIC2.29□□□□□ -2.04
CCDC136Q96JN2 RNU6-976P-201ENST00000516086 111 ntBASIC2.29□□□□□ -2.04
CCDC136Q96JN2 RNU4-77P-201ENST00000516692 156 ntBASIC2.29□□□□□ -2.04
CCDC136Q96JN2 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.29□□□□□ -2.04
CCDC136Q96JN2 MIR410-201ENST00000362222 80 ntBASIC2.28□□□□□ -2.04
CCDC136Q96JN2 Y_RNA.252-201ENST00000364556 101 ntBASIC2.28□□□□□ -2.04
CCDC136Q96JN2 Y_RNA.604-201ENST00000410574 102 ntBASIC2.28□□□□□ -2.04
CCDC136Q96JN2 EBAG9P1-201ENST00000418955 543 ntBASIC2.28□□□□□ -2.04
CCDC136Q96JN2 AC069257.2-201ENST00000441819 155 ntBASIC2.28□□□□□ -2.04
CCDC136Q96JN2 FCF1P4-201ENST00000448326 183 ntBASIC2.28□□□□□ -2.04
CCDC136Q96JN2 HMGN1P13-201ENST00000505795 138 ntBASIC2.28□□□□□ -2.04
CCDC136Q96JN2 AC010598.1-201ENST00000510378 103 ntBASIC2.28□□□□□ -2.04
CCDC136Q96JN2 RNU6-1012P-201ENST00000516606 109 ntBASIC2.28□□□□□ -2.04
CCDC136Q96JN2 AC024995.1-201ENST00000523014 93 ntBASIC2.28□□□□□ -2.04
CCDC136Q96JN2 MIR3618-201ENST00000580330 88 ntBASIC2.28□□□□□ -2.04
CCDC136Q96JN2 VN1R91P-201ENST00000594377 169 ntBASIC2.28□□□□□ -2.04
CCDC136Q96JN2 AL080274.1-201ENST00000605565 220 ntBASIC2.28□□□□□ -2.04
CCDC136Q96JN2 AL050343.2-201ENST00000607338 280 ntBASIC2.28□□□□□ -2.04
CCDC136Q96JN2 U6.115-201ENST00000636045 103 ntBASIC2.28□□□□□ -2.04
CCDC136Q96JN2 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC2.28□□□□□ -2.04
CCDC136Q96JN2 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.28□□□□□ -2.05
CCDC136Q96JN2 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CCDC136Q96JN2 AC092881.1-201ENST00000638218 2733 ntBASIC2.27□□□□□ -2.05
CCDC136Q96JN2 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
CCDC136Q96JN2 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CCDC136Q96JN2 MIR369-201ENST00000362155 70 ntBASIC2.27□□□□□ -2.05
CCDC136Q96JN2 MIR424-201ENST00000362227 98 ntBASIC2.27□□□□□ -2.05
CCDC136Q96JN2 SNORD114-1-201ENST00000362705 72 ntBASIC2.27□□□□□ -2.05
CCDC136Q96JN2 Y_RNA.80-201ENST00000362996 102 ntBASIC2.27□□□□□ -2.05
CCDC136Q96JN2 Y_RNA.197-201ENST00000364004 102 ntBASIC2.27□□□□□ -2.05
CCDC136Q96JN2 Y_RNA.485-201ENST00000384395 102 ntBASIC2.27□□□□□ -2.05
CCDC136Q96JN2 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.27□□□□□ -2.05
CCDC136Q96JN2 RNU6-911P-201ENST00000516523 104 ntBASIC2.27□□□□□ -2.05
CCDC136Q96JN2 MIR4659A-201ENST00000580269 81 ntBASIC2.27□□□□□ -2.05
CCDC136Q96JN2 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.27□□□□□ -2.05
CCDC136Q96JN2 RNU6-407P-201ENST00000365280 104 ntBASIC2.26□□□□□ -2.05
CCDC136Q96JN2 AL121890.1-201ENST00000435457 205 ntBASIC2.26□□□□□ -2.05
CCDC136Q96JN2 RPS27P1-201ENST00000450552 247 ntBASIC2.26□□□□□ -2.05
CCDC136Q96JN2 RPL36AP21-201ENST00000490372 323 ntBASIC2.26□□□□□ -2.05
CCDC136Q96JN2 AC025465.3-201ENST00000510570 311 ntBASIC2.26□□□□□ -2.05
CCDC136Q96JN2 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.26□□□□□ -2.05
CCDC136Q96JN2 MIR5188-201ENST00000583467 113 ntBASIC2.26□□□□□ -2.05
CCDC136Q96JN2 AC022217.4-201ENST00000604389 163 ntBASIC2.26□□□□□ -2.05
CCDC136Q96JN2 SNORD58B-201ENST00000607313 66 ntBASIC2.26□□□□□ -2.05
CCDC136Q96JN2 AC004467.1-201ENST00000615678 330 ntBASIC2.26□□□□□ -2.05
CCDC136Q96JN2 AC095038.3-201ENST00000634439 195 ntBASIC2.26□□□□□ -2.05
CCDC136Q96JN2 Y_RNA.27-201ENST00000362540 103 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms