Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.34□□□□□ -2.03
CTHRC1Q96CG8 MTCO1P44-201ENST00000441935 243 ntBASIC2.34□□□□□ -2.03
CTHRC1Q96CG8 AC245102.2-201ENST00000448956 180 ntBASIC2.34□□□□□ -2.03
CTHRC1Q96CG8 AL139109.1-201ENST00000455491 297 ntBASIC2.34□□□□□ -2.03
CTHRC1Q96CG8 SNORD65B-201ENST00000459126 73 ntBASIC2.34□□□□□ -2.03
CTHRC1Q96CG8 AC010531.2-201ENST00000465012 153 ntBASIC2.34□□□□□ -2.03
CTHRC1Q96CG8 RNA5SP320-201ENST00000516263 124 ntBASIC2.34□□□□□ -2.03
CTHRC1Q96CG8 AC025647.1-201ENST00000517879 253 ntBASIC2.34□□□□□ -2.03
CTHRC1Q96CG8 MIR5194-201ENST00000582634 120 ntBASIC2.34□□□□□ -2.03
CTHRC1Q96CG8 MIR6817-201ENST00000615588 66 ntBASIC2.34□□□□□ -2.03
CTHRC1Q96CG8 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
CTHRC1Q96CG8 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.34□□□□□ -2.04
CTHRC1Q96CG8 MAPK10-266ENST00000641066 6555 ntBASIC2.33□□□□□ -2.04
CTHRC1Q96CG8 Y_RNA.99-201ENST00000363138 105 ntBASIC2.33□□□□□ -2.04
CTHRC1Q96CG8 RNU6-740P-201ENST00000364734 105 ntBASIC2.33□□□□□ -2.04
CTHRC1Q96CG8 MIR518C-201ENST00000384822 101 ntBASIC2.33□□□□□ -2.04
CTHRC1Q96CG8 SNORD58.1-201ENST00000391313 66 ntBASIC2.33□□□□□ -2.04
CTHRC1Q96CG8 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.33□□□□□ -2.04
CTHRC1Q96CG8 AC010154.1-201ENST00000425857 269 ntBASIC2.33□□□□□ -2.04
CTHRC1Q96CG8 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.33□□□□□ -2.04
CTHRC1Q96CG8 RPS12P2-201ENST00000439728 269 ntBASIC2.33□□□□□ -2.04
CTHRC1Q96CG8 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.33□□□□□ -2.04
CTHRC1Q96CG8 AC009127.3-201ENST00000570531 403 ntBASIC2.33□□□□□ -2.04
CTHRC1Q96CG8 AC026271.5-201ENST00000577873 130 ntBASIC2.33□□□□□ -2.04
CTHRC1Q96CG8 AC005828.6-201ENST00000606610 232 ntBASIC2.33□□□□□ -2.04
CTHRC1Q96CG8 U4.3-201ENST00000621047 82 ntBASIC2.33□□□□□ -2.04
CTHRC1Q96CG8 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
CTHRC1Q96CG8 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
CTHRC1Q96CG8 SNORA20B-201ENST00000384220 132 ntBASIC2.32□□□□□ -2.04
CTHRC1Q96CG8 RNU6-1289P-201ENST00000384431 106 ntBASIC2.32□□□□□ -2.04
CTHRC1Q96CG8 MIR873-201ENST00000401120 77 ntBASIC2.32□□□□□ -2.04
CTHRC1Q96CG8 MIR1253-201ENST00000408273 105 ntBASIC2.32□□□□□ -2.04
CTHRC1Q96CG8 RNU2-61P-201ENST00000411069 191 ntBASIC2.32□□□□□ -2.04
CTHRC1Q96CG8 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
CTHRC1Q96CG8 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.32□□□□□ -2.04
CTHRC1Q96CG8 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.32□□□□□ -2.04
CTHRC1Q96CG8 RNA5SP148-201ENST00000516527 94 ntBASIC2.32□□□□□ -2.04
CTHRC1Q96CG8 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.32□□□□□ -2.04
CTHRC1Q96CG8 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.32□□□□□ -2.04
CTHRC1Q96CG8 MIR4446-201ENST00000578505 67 ntBASIC2.32□□□□□ -2.04
CTHRC1Q96CG8 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.32□□□□□ -2.04
CTHRC1Q96CG8 AC006435.5-201ENST00000624486 112 ntBASIC2.32□□□□□ -2.04
CTHRC1Q96CG8 AL159152.1-201ENST00000635019 2587 ntBASIC2.32□□□□□ -2.04
CTHRC1Q96CG8 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
CTHRC1Q96CG8 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
CTHRC1Q96CG8 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CTHRC1Q96CG8 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CTHRC1Q96CG8 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CTHRC1Q96CG8 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
CTHRC1Q96CG8 Y_RNA.269-201ENST00000364685 89 ntBASIC2.31□□□□□ -2.04
CTHRC1Q96CG8 RNU6-662P-201ENST00000384253 104 ntBASIC2.31□□□□□ -2.04
CTHRC1Q96CG8 SNORA67.4-201ENST00000384688 142 ntBASIC2.31□□□□□ -2.04
CTHRC1Q96CG8 AL355796.1-201ENST00000406706 323 ntBASIC2.31□□□□□ -2.04
CTHRC1Q96CG8 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.31□□□□□ -2.04
CTHRC1Q96CG8 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.31□□□□□ -2.04
CTHRC1Q96CG8 AL121890.1-201ENST00000435457 205 ntBASIC2.31□□□□□ -2.04
CTHRC1Q96CG8 RNU6-1146P-201ENST00000516282 102 ntBASIC2.31□□□□□ -2.04
CTHRC1Q96CG8 CYCSP26-201ENST00000534107 320 ntBASIC2.31□□□□□ -2.04
CTHRC1Q96CG8 MIR3126-201ENST00000577443 74 ntBASIC2.31□□□□□ -2.04
CTHRC1Q96CG8 MIR4643-201ENST00000577473 78 ntBASIC2.31□□□□□ -2.04
CTHRC1Q96CG8 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.31□□□□□ -2.04
CTHRC1Q96CG8 AC016717.2-201ENST00000609089 5141 ntBASIC2.31□□□□□ -2.04
CTHRC1Q96CG8 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CTHRC1Q96CG8 RNU4-82P-201ENST00000362443 140 ntBASIC2.3□□□□□ -2.04
CTHRC1Q96CG8 Y_RNA.82-201ENST00000363000 102 ntBASIC2.3□□□□□ -2.04
CTHRC1Q96CG8 Y_RNA.92-201ENST00000363043 102 ntBASIC2.3□□□□□ -2.04
CTHRC1Q96CG8 Y_RNA.122-201ENST00000363331 96 ntBASIC2.3□□□□□ -2.04
CTHRC1Q96CG8 Y_RNA.235-201ENST00000364412 102 ntBASIC2.3□□□□□ -2.04
CTHRC1Q96CG8 Y_RNA.306-201ENST00000365015 102 ntBASIC2.3□□□□□ -2.04
CTHRC1Q96CG8 Y_RNA.312-201ENST00000365089 102 ntBASIC2.3□□□□□ -2.04
CTHRC1Q96CG8 Y_RNA.322-201ENST00000365151 102 ntBASIC2.3□□□□□ -2.04
CTHRC1Q96CG8 Y_RNA.341-201ENST00000365341 102 ntBASIC2.3□□□□□ -2.04
CTHRC1Q96CG8 Y_RNA.361-201ENST00000365515 120 ntBASIC2.3□□□□□ -2.04
CTHRC1Q96CG8 AL359511.1-201ENST00000402970 211 ntBASIC2.3□□□□□ -2.04
CTHRC1Q96CG8 AL513328.1-201ENST00000446460 224 ntBASIC2.3□□□□□ -2.04
CTHRC1Q96CG8 Y_RNA.650-201ENST00000459002 102 ntBASIC2.3□□□□□ -2.04
CTHRC1Q96CG8 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.3□□□□□ -2.04
CTHRC1Q96CG8 RNU6-856P-201ENST00000516959 98 ntBASIC2.3□□□□□ -2.04
CTHRC1Q96CG8 Y_RNA.777-201ENST00000516982 102 ntBASIC2.3□□□□□ -2.04
CTHRC1Q96CG8 AC027419.1-201ENST00000522976 328 ntBASIC2.3□□□□□ -2.04
CTHRC1Q96CG8 AC087441.2-201ENST00000529141 262 ntBASIC2.3□□□□□ -2.04
CTHRC1Q96CG8 MIR3124-201ENST00000582636 67 ntBASIC2.3□□□□□ -2.04
CTHRC1Q96CG8 Y_RNA.771-201ENST00000598668 102 ntBASIC2.3□□□□□ -2.04
CTHRC1Q96CG8 Y_RNA.789-201ENST00000622480 102 ntBASIC2.3□□□□□ -2.04
CTHRC1Q96CG8 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.3□□□□□ -2.04
CTHRC1Q96CG8 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
CTHRC1Q96CG8 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.29□□□□□ -2.04
CTHRC1Q96CG8 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CTHRC1Q96CG8 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
CTHRC1Q96CG8 SNORA27.1-201ENST00000362604 124 ntBASIC2.29□□□□□ -2.04
CTHRC1Q96CG8 Y_RNA.117-201ENST00000363294 101 ntBASIC2.29□□□□□ -2.04
CTHRC1Q96CG8 SNORA25.6-201ENST00000364121 118 ntBASIC2.29□□□□□ -2.04
CTHRC1Q96CG8 RNY1-201ENST00000364228 113 ntBASIC2.29□□□□□ -2.04
CTHRC1Q96CG8 RNU1-91P-201ENST00000364746 163 ntBASIC2.29□□□□□ -2.04
CTHRC1Q96CG8 RNU6-407P-201ENST00000365280 104 ntBASIC2.29□□□□□ -2.04
CTHRC1Q96CG8 Y_RNA.456-201ENST00000384232 111 ntBASIC2.29□□□□□ -2.04
CTHRC1Q96CG8 RNU6-160P-201ENST00000384591 107 ntBASIC2.29□□□□□ -2.04
CTHRC1Q96CG8 RNU6-1072P-201ENST00000384703 107 ntBASIC2.29□□□□□ -2.04
CTHRC1Q96CG8 RNU6-443P-201ENST00000384780 107 ntBASIC2.29□□□□□ -2.04
CTHRC1Q96CG8 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 250.3 ms