Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 RPL23AP63-201ENST00000498752 471 ntBASIC1.93□□□□□ -2.1
SMARCE1Q969G3 HMGN1P13-201ENST00000505795 138 ntBASIC1.93□□□□□ -2.1
SMARCE1Q969G3 RNU6-1012P-201ENST00000516606 109 ntBASIC1.93□□□□□ -2.1
SMARCE1Q969G3 AC084364.2-201ENST00000546924 395 ntBASIC1.93□□□□□ -2.1
SMARCE1Q969G3 DEFB122-202ENST00000569013 197 ntBASIC1.93□□□□□ -2.1
SMARCE1Q969G3 AC055872.1-201ENST00000570978 278 ntBASIC1.93□□□□□ -2.1
SMARCE1Q969G3 MIR5188-201ENST00000583467 113 ntBASIC1.93□□□□□ -2.1
SMARCE1Q969G3 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.93□□□□□ -2.1
SMARCE1Q969G3 AC006157.1-201ENST00000611750 366 ntBASIC1.93□□□□□ -2.1
SMARCE1Q969G3 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.93□□□□□ -2.1
SMARCE1Q969G3 AC011476.5-201ENST00000615594 130 ntBASIC1.93□□□□□ -2.1
SMARCE1Q969G3 AC090971.5-201ENST00000621102 293 ntBASIC1.93□□□□□ -2.1
SMARCE1Q969G3 AC090574.1-201ENST00000623186 233 ntBASIC1.93□□□□□ -2.1
SMARCE1Q969G3 AL606534.2-204ENST00000635008 178 ntBASIC1.93□□□□□ -2.1
SMARCE1Q969G3 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.92□□□□□ -2.1
SMARCE1Q969G3 MIR410-201ENST00000362222 80 ntBASIC1.92□□□□□ -2.1
SMARCE1Q969G3 RNA5SP126-201ENST00000365092 109 ntBASIC1.92□□□□□ -2.1
SMARCE1Q969G3 Y_RNA.460-201ENST00000384255 102 ntBASIC1.92□□□□□ -2.1
SMARCE1Q969G3 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.92□□□□□ -2.1
SMARCE1Q969G3 RPS29P21-201ENST00000496272 170 ntBASIC1.92□□□□□ -2.1
SMARCE1Q969G3 RNU6-1146P-201ENST00000516282 102 ntBASIC1.92□□□□□ -2.1
SMARCE1Q969G3 AC027419.1-201ENST00000522976 328 ntBASIC1.92□□□□□ -2.1
SMARCE1Q969G3 MIR3674-201ENST00000636576 68 ntBASIC1.92□□□□□ -2.1
SMARCE1Q969G3 Y_RNA.27-201ENST00000362540 103 ntBASIC1.91□□□□□ -2.1
SMARCE1Q969G3 Y_RNA.39-201ENST00000362620 98 ntBASIC1.91□□□□□ -2.1
SMARCE1Q969G3 RNU6-1266P-201ENST00000362794 105 ntBASIC1.91□□□□□ -2.1
SMARCE1Q969G3 RNU6-1019P-201ENST00000364424 107 ntBASIC1.91□□□□□ -2.1
SMARCE1Q969G3 RNU6-474P-201ENST00000384243 107 ntBASIC1.91□□□□□ -2.1
SMARCE1Q969G3 SNORD78.2-201ENST00000391076 69 ntBASIC1.91□□□□□ -2.1
SMARCE1Q969G3 AL355796.1-201ENST00000406706 323 ntBASIC1.91□□□□□ -2.1
SMARCE1Q969G3 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.91□□□□□ -2.1
SMARCE1Q969G3 FCF1P4-201ENST00000448326 183 ntBASIC1.91□□□□□ -2.1
SMARCE1Q969G3 RNA5SP437-201ENST00000517249 129 ntBASIC1.91□□□□□ -2.1
SMARCE1Q969G3 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.91□□□□□ -2.1
SMARCE1Q969G3 MIR4659A-201ENST00000580269 81 ntBASIC1.91□□□□□ -2.1
SMARCE1Q969G3 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.91□□□□□ -2.1
SMARCE1Q969G3 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.91□□□□□ -2.1
SMARCE1Q969G3 U6.108-201ENST00000637764 58 ntBASIC1.91□□□□□ -2.1
SMARCE1Q969G3 AC010615.1-201ENST00000594254 1764 ntBASIC1.9□□□□□ -2.1
SMARCE1Q969G3 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
SMARCE1Q969G3 SNORA40.18-201ENST00000391200 128 ntBASIC1.9□□□□□ -2.11
SMARCE1Q969G3 PMCHL1-202ENST00000423102 261 ntBASIC1.9□□□□□ -2.11
SMARCE1Q969G3 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.9□□□□□ -2.11
SMARCE1Q969G3 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.9□□□□□ -2.11
SMARCE1Q969G3 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.9□□□□□ -2.11
SMARCE1Q969G3 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.9□□□□□ -2.11
SMARCE1Q969G3 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.9□□□□□ -2.11
SMARCE1Q969G3 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.9□□□□□ -2.11
SMARCE1Q969G3 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.9□□□□□ -2.11
SMARCE1Q969G3 MIR4713-201ENST00000582691 75 ntBASIC1.9□□□□□ -2.11
SMARCE1Q969G3 AC022432.1-201ENST00000595739 310 ntBASIC1.9□□□□□ -2.11
SMARCE1Q969G3 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.9□□□□□ -2.11
SMARCE1Q969G3 Y_RNA.138-201ENST00000363462 102 ntBASIC1.89□□□□□ -2.11
SMARCE1Q969G3 Y_RNA.445-201ENST00000384168 102 ntBASIC1.89□□□□□ -2.11
SMARCE1Q969G3 RNU6-439P-201ENST00000384188 106 ntBASIC1.89□□□□□ -2.11
SMARCE1Q969G3 SNORA20B-201ENST00000384220 132 ntBASIC1.89□□□□□ -2.11
SMARCE1Q969G3 MIR583-201ENST00000384846 75 ntBASIC1.89□□□□□ -2.11
SMARCE1Q969G3 MCFD2P1-201ENST00000417812 300 ntBASIC1.89□□□□□ -2.11
SMARCE1Q969G3 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.89□□□□□ -2.11
SMARCE1Q969G3 AL160004.2-201ENST00000432935 350 ntBASIC1.89□□□□□ -2.11
SMARCE1Q969G3 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.89□□□□□ -2.11
SMARCE1Q969G3 RNU7-128P-201ENST00000517247 62 ntBASIC1.89□□□□□ -2.11
SMARCE1Q969G3 AC103810.8-201ENST00000607347 118 ntBASIC1.89□□□□□ -2.11
SMARCE1Q969G3 AC084768.2-201ENST00000622736 221 ntBASIC1.89□□□□□ -2.11
SMARCE1Q969G3 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SMARCE1Q969G3 SNORA63D-201ENST00000364359 132 ntBASIC1.88□□□□□ -2.11
SMARCE1Q969G3 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
SMARCE1Q969G3 RNA5SP475-201ENST00000410568 110 ntBASIC1.88□□□□□ -2.11
SMARCE1Q969G3 MTND1P14-201ENST00000427400 950 ntBASIC1.88□□□□□ -2.11
SMARCE1Q969G3 AC005002.2-201ENST00000438228 269 ntBASIC1.88□□□□□ -2.11
SMARCE1Q969G3 MTND4P19-201ENST00000446659 478 ntBASIC1.88□□□□□ -2.11
SMARCE1Q969G3 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.88□□□□□ -2.11
SMARCE1Q969G3 AC010598.1-201ENST00000510378 103 ntBASIC1.88□□□□□ -2.11
SMARCE1Q969G3 SNORA40.14-201ENST00000516543 86 ntBASIC1.88□□□□□ -2.11
SMARCE1Q969G3 RN7SKP295-201ENST00000517264 153 ntBASIC1.88□□□□□ -2.11
SMARCE1Q969G3 AC023442.1-201ENST00000531247 422 ntBASIC1.88□□□□□ -2.11
SMARCE1Q969G3 AC023157.2-201ENST00000540596 141 ntBASIC1.88□□□□□ -2.11
SMARCE1Q969G3 AC240442.1-201ENST00000616055 283 ntBASIC1.88□□□□□ -2.11
SMARCE1Q969G3 U6.73-201ENST00000619194 103 ntBASIC1.88□□□□□ -2.11
SMARCE1Q969G3 U6.115-201ENST00000636045 103 ntBASIC1.88□□□□□ -2.11
SMARCE1Q969G3 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SMARCE1Q969G3 AC091812.1-201ENST00000432235 1948 ntBASIC1.87□□□□□ -2.11
SMARCE1Q969G3 MIR520A-201ENST00000384862 85 ntBASIC1.87□□□□□ -2.11
SMARCE1Q969G3 MRPL35P1-201ENST00000404272 572 ntBASIC1.87□□□□□ -2.11
SMARCE1Q969G3 RNU6-1186P-201ENST00000410429 97 ntBASIC1.87□□□□□ -2.11
SMARCE1Q969G3 MTCO3P19-201ENST00000415864 321 ntBASIC1.87□□□□□ -2.11
SMARCE1Q969G3 SDAD1P3-201ENST00000427380 333 ntBASIC1.87□□□□□ -2.11
SMARCE1Q969G3 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.87□□□□□ -2.11
SMARCE1Q969G3 AL163195.1-201ENST00000496941 348 ntBASIC1.87□□□□□ -2.11
SMARCE1Q969G3 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.87□□□□□ -2.11
SMARCE1Q969G3 HSBP1P1-201ENST00000555205 166 ntBASIC1.87□□□□□ -2.11
SMARCE1Q969G3 AL137100.2-201ENST00000555786 315 ntBASIC1.87□□□□□ -2.11
SMARCE1Q969G3 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.87□□□□□ -2.11
SMARCE1Q969G3 AC004467.1-201ENST00000615678 330 ntBASIC1.87□□□□□ -2.11
SMARCE1Q969G3 SNORD114-1-201ENST00000362705 72 ntBASIC1.86□□□□□ -2.11
SMARCE1Q969G3 Y_RNA.101-201ENST00000363154 102 ntBASIC1.86□□□□□ -2.11
SMARCE1Q969G3 Y_RNA.148-201ENST00000363557 117 ntBASIC1.86□□□□□ -2.11
SMARCE1Q969G3 RNU6-20P-201ENST00000384106 107 ntBASIC1.86□□□□□ -2.11
SMARCE1Q969G3 MIR515-2-201ENST00000384883 83 ntBASIC1.86□□□□□ -2.11
SMARCE1Q969G3 MIR515-1-201ENST00000384884 83 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms