Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.94□□□□□ -1.94
RTF1Q92541 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.94□□□□□ -1.94
RTF1Q92541 AC135776.4-201ENST00000624300 1904 ntBASIC2.93□□□□□ -1.94
RTF1Q92541 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
RTF1Q92541 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
RTF1Q92541 Y_RNA.275-201ENST00000364726 110 ntBASIC2.93□□□□□ -1.94
RTF1Q92541 AC092427.1-202ENST00000430569 476 ntBASIC2.93□□□□□ -1.94
RTF1Q92541 AL121890.1-201ENST00000435457 205 ntBASIC2.93□□□□□ -1.94
RTF1Q92541 AC114982.1-201ENST00000469402 321 ntBASIC2.93□□□□□ -1.94
RTF1Q92541 AC091959.1-201ENST00000495857 238 ntBASIC2.93□□□□□ -1.94
RTF1Q92541 YWHAEP4-201ENST00000505390 198 ntBASIC2.93□□□□□ -1.94
RTF1Q92541 SNORA27.4-201ENST00000516650 95 ntBASIC2.93□□□□□ -1.94
RTF1Q92541 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.93□□□□□ -1.94
RTF1Q92541 AC022616.8-201ENST00000533569 253 ntBASIC2.93□□□□□ -1.94
RTF1Q92541 AL137847.3-201ENST00000611521 109 ntBASIC2.93□□□□□ -1.94
RTF1Q92541 AL442067.1-201ENST00000613261 223 ntBASIC2.93□□□□□ -1.94
RTF1Q92541 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
RTF1Q92541 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.93□□□□□ -1.94
RTF1Q92541 Y_RNA.65-201ENST00000362846 100 ntBASIC2.92□□□□□ -1.94
RTF1Q92541 RNU6-461P-201ENST00000364195 107 ntBASIC2.92□□□□□ -1.94
RTF1Q92541 RNU6-200P-201ENST00000364743 107 ntBASIC2.92□□□□□ -1.94
RTF1Q92541 SNORD31B-201ENST00000364977 69 ntBASIC2.92□□□□□ -1.94
RTF1Q92541 RNU6-546P-201ENST00000383991 107 ntBASIC2.92□□□□□ -1.94
RTF1Q92541 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
RTF1Q92541 RNU6-1248P-201ENST00000391096 64 ntBASIC2.92□□□□□ -1.94
RTF1Q92541 RNU2-63P-201ENST00000410792 194 ntBASIC2.92□□□□□ -1.94
RTF1Q92541 RNU2-14P-201ENST00000411053 191 ntBASIC2.92□□□□□ -1.94
RTF1Q92541 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.92□□□□□ -1.94
RTF1Q92541 AC074290.1-201ENST00000448883 135 ntBASIC2.92□□□□□ -1.94
RTF1Q92541 CKS1BP2-201ENST00000497342 240 ntBASIC2.92□□□□□ -1.94
RTF1Q92541 MIR4643-201ENST00000577473 78 ntBASIC2.92□□□□□ -1.94
RTF1Q92541 MIR3684-201ENST00000579779 74 ntBASIC2.92□□□□□ -1.94
RTF1Q92541 MIR4753-201ENST00000585119 83 ntBASIC2.92□□□□□ -1.94
RTF1Q92541 AL162424.1-201ENST00000602325 221 ntBASIC2.92□□□□□ -1.94
RTF1Q92541 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.92□□□□□ -1.94
RTF1Q92541 FO624990.1-201ENST00000636373 85 ntBASIC2.92□□□□□ -1.94
RTF1Q92541 AC009487.4-201ENST00000624969 3585 ntBASIC2.92□□□□□ -1.94
RTF1Q92541 ZNF271P-202ENST00000465539 1970 ntBASIC2.91□□□□□ -1.94
RTF1Q92541 RNU6-545P-201ENST00000362681 104 ntBASIC2.91□□□□□ -1.94
RTF1Q92541 Y_RNA.243-201ENST00000364481 109 ntBASIC2.91□□□□□ -1.94
RTF1Q92541 Y_RNA.269-201ENST00000364685 89 ntBASIC2.91□□□□□ -1.94
RTF1Q92541 RNU6-220P-201ENST00000390919 107 ntBASIC2.91□□□□□ -1.94
RTF1Q92541 MIR1185-2-201ENST00000408687 86 ntBASIC2.91□□□□□ -1.94
RTF1Q92541 U3.40-201ENST00000408706 208 ntBASIC2.91□□□□□ -1.94
RTF1Q92541 RNU2-32P-201ENST00000411193 191 ntBASIC2.91□□□□□ -1.94
RTF1Q92541 ATP5EP1-201ENST00000510257 156 ntBASIC2.91□□□□□ -1.94
RTF1Q92541 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.91□□□□□ -1.94
RTF1Q92541 Y_RNA.700-201ENST00000516806 100 ntBASIC2.91□□□□□ -1.94
RTF1Q92541 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.91□□□□□ -1.94
RTF1Q92541 MIR3124-201ENST00000582636 67 ntBASIC2.91□□□□□ -1.94
RTF1Q92541 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.91□□□□□ -1.94
RTF1Q92541 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
RTF1Q92541 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.91□□□□□ -1.94
RTF1Q92541 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.9□□□□□ -1.95
RTF1Q92541 Y_RNA.82-201ENST00000363000 102 ntBASIC2.9□□□□□ -1.95
RTF1Q92541 Y_RNA.92-201ENST00000363043 102 ntBASIC2.9□□□□□ -1.95
RTF1Q92541 SNORD115-30-201ENST00000364117 82 ntBASIC2.9□□□□□ -1.95
RTF1Q92541 Y_RNA.235-201ENST00000364412 102 ntBASIC2.9□□□□□ -1.95
RTF1Q92541 RNU6-740P-201ENST00000364734 105 ntBASIC2.9□□□□□ -1.95
RTF1Q92541 Y_RNA.306-201ENST00000365015 102 ntBASIC2.9□□□□□ -1.95
RTF1Q92541 Y_RNA.312-201ENST00000365089 102 ntBASIC2.9□□□□□ -1.95
RTF1Q92541 Y_RNA.322-201ENST00000365151 102 ntBASIC2.9□□□□□ -1.95
RTF1Q92541 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
RTF1Q92541 RNU2-64P-201ENST00000411315 191 ntBASIC2.9□□□□□ -1.95
RTF1Q92541 AC003685.2-201ENST00000422795 395 ntBASIC2.9□□□□□ -1.95
RTF1Q92541 SUMO1P2-201ENST00000452524 304 ntBASIC2.9□□□□□ -1.95
RTF1Q92541 AC016925.1-201ENST00000458303 298 ntBASIC2.9□□□□□ -1.95
RTF1Q92541 Y_RNA.650-201ENST00000459002 102 ntBASIC2.9□□□□□ -1.95
RTF1Q92541 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.9□□□□□ -1.95
RTF1Q92541 RNU6-436P-201ENST00000516171 114 ntBASIC2.9□□□□□ -1.95
RTF1Q92541 Y_RNA.777-201ENST00000516982 102 ntBASIC2.9□□□□□ -1.95
RTF1Q92541 AL512605.2-201ENST00000592972 256 ntBASIC2.9□□□□□ -1.95
RTF1Q92541 Y_RNA.771-201ENST00000598668 102 ntBASIC2.9□□□□□ -1.95
RTF1Q92541 MIR6132-201ENST00000622083 109 ntBASIC2.9□□□□□ -1.95
RTF1Q92541 Y_RNA.789-201ENST00000622480 102 ntBASIC2.9□□□□□ -1.95
RTF1Q92541 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.89□□□□□ -1.95
RTF1Q92541 RNU1-138P-201ENST00000384093 164 ntBASIC2.89□□□□□ -1.95
RTF1Q92541 SNORA11.4-201ENST00000408823 129 ntBASIC2.89□□□□□ -1.95
RTF1Q92541 AL139156.1-201ENST00000412785 841 ntBASIC2.89□□□□□ -1.95
RTF1Q92541 AC024067.1-201ENST00000426199 223 ntBASIC2.89□□□□□ -1.95
RTF1Q92541 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.89□□□□□ -1.95
RTF1Q92541 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.89□□□□□ -1.95
RTF1Q92541 RNU6-138P-201ENST00000515952 107 ntBASIC2.89□□□□□ -1.95
RTF1Q92541 RNU6-191P-201ENST00000516295 94 ntBASIC2.89□□□□□ -1.95
RTF1Q92541 RNA5SP200-201ENST00000516360 103 ntBASIC2.89□□□□□ -1.95
RTF1Q92541 IGKV3-31-201ENST00000523109 329 ntBASIC2.89□□□□□ -1.95
RTF1Q92541 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.89□□□□□ -1.95
RTF1Q92541 RPL21P9-201ENST00000556149 474 ntBASIC2.89□□□□□ -1.95
RTF1Q92541 MIR4282-201ENST00000583613 67 ntBASIC2.89□□□□□ -1.95
RTF1Q92541 AC009831.4-201ENST00000620744 325 ntBASIC2.89□□□□□ -1.95
RTF1Q92541 MIR1248-201ENST00000629190 106 ntBASIC2.89□□□□□ -1.95
RTF1Q92541 AC080100.1-201ENST00000624239 5356 ntBASIC2.89□□□□□ -1.95
RTF1Q92541 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
RTF1Q92541 RNU4-80P-201ENST00000363200 141 ntBASIC2.88□□□□□ -1.95
RTF1Q92541 Y_RNA.329-201ENST00000365209 107 ntBASIC2.88□□□□□ -1.95
RTF1Q92541 Y_RNA.361-201ENST00000365515 120 ntBASIC2.88□□□□□ -1.95
RTF1Q92541 Y_RNA.785-201ENST00000384290 109 ntBASIC2.88□□□□□ -1.95
RTF1Q92541 RNU6-975P-201ENST00000384296 105 ntBASIC2.88□□□□□ -1.95
RTF1Q92541 AL357139.1-201ENST00000407792 426 ntBASIC2.88□□□□□ -1.95
RTF1Q92541 RNU7-57P-201ENST00000459540 60 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms